data_A1APQ # _chem_comp.id A1APQ _chem_comp.name "(4S,5R,7R,11aP)-10-{[(3R)-3-hydroxy-1-methyl-2-oxopyrrolidin-3-yl]ethynyl}-N~3~-methyl-6,7-dihydro-5H-5,7-methanoimidazo[2,1-a][2]benzazepine-2,3-dicarboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H23 N5 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-25 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 433.460 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1APQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9BJ1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1APQ C5 C1 C 0 1 Y N N N N N -22.284 36.163 -22.890 -3.964 -0.419 0.137 C5 A1APQ 1 A1APQ C6 C2 C 0 1 Y N N N N N -23.271 36.571 -21.979 -3.170 -1.547 0.292 C6 A1APQ 2 A1APQ C3 C3 C 0 1 N N N N N N -22.144 36.519 -24.395 -5.413 -0.387 -0.121 C3 A1APQ 3 A1APQ C1 C4 C 0 1 N N N N N N -22.884 37.699 -26.504 -7.308 -0.052 -1.617 C1 A1APQ 4 A1APQ C10 C5 C 0 1 N N N N N N -20.173 34.600 -22.659 -3.583 2.039 0.451 C10 A1APQ 5 A1APQ C11 C6 C 0 1 N N N N N N -19.805 33.402 -22.233 -2.982 2.969 -0.627 C11 A1APQ 6 A1APQ C12 C7 C 0 1 N N N N N N -19.379 33.554 -21.024 -1.807 3.237 0.330 C12 A1APQ 7 A1APQ C13 C8 C 0 1 N N N N N N -19.134 34.859 -21.648 -2.748 2.835 1.452 C13 A1APQ 8 A1APQ C14 C9 C 0 1 Y N N N N N -20.265 33.834 -19.854 -0.631 2.341 0.116 C14 A1APQ 9 A1APQ C15 C10 C 0 1 Y N N N N N -21.364 34.585 -19.889 -0.629 0.970 0.282 C15 A1APQ 10 A1APQ C16 C11 C 0 1 Y N N N N N -22.136 34.778 -18.728 0.564 0.243 0.223 C16 A1APQ 11 A1APQ C17 C12 C 0 1 Y N N N N N -21.738 34.136 -17.559 1.751 0.885 -0.113 C17 A1APQ 12 A1APQ C18 C13 C 0 1 Y N N N N N -20.619 33.343 -17.532 1.730 2.255 -0.382 C18 A1APQ 13 A1APQ C19 C14 C 0 1 Y N N N N N -19.865 33.179 -18.679 0.560 2.966 -0.261 C19 A1APQ 14 A1APQ C20 C15 C 0 1 N N N N N N -22.547 34.290 -16.269 2.979 0.150 -0.183 C20 A1APQ 15 A1APQ C21 C16 C 0 1 N N N N N N -23.177 34.432 -15.269 3.985 -0.452 -0.239 C21 A1APQ 16 A1APQ C22 C17 C 0 1 N N R N N N -23.953 34.750 -13.985 5.247 -1.206 -0.310 C22 A1APQ 17 A1APQ C23 C18 C 0 1 N N N N N N -25.478 33.970 -14.005 5.638 -1.739 1.087 C23 A1APQ 18 A1APQ C24 C19 C 0 1 N N N N N N -26.384 34.844 -14.288 6.576 -0.622 1.598 C24 A1APQ 19 A1APQ C26 C20 C 0 1 N N N N N N -24.143 36.038 -13.964 6.390 -0.292 -0.693 C26 A1APQ 20 A1APQ C28 C21 C 0 1 N N N N N N -26.400 37.573 -14.204 8.307 0.873 0.376 C28 A1APQ 21 A1APQ C30 C22 C 0 1 N N N N N N -24.484 37.482 -22.236 -3.634 -2.952 0.293 C30 A1APQ 22 A1APQ C8 C23 C 0 1 Y N N N N N -21.875 35.264 -20.954 -1.864 0.183 0.338 C8 A1APQ 23 A1APQ N2 N1 N 0 1 N N N N N N -23.061 37.403 -25.066 -5.870 -0.199 -1.375 N2 A1APQ 24 A1APQ N25 N2 N 0 1 N N N N N N -25.715 36.282 -14.163 7.120 0.014 0.393 N25 A1APQ 25 A1APQ N32 N3 N 0 1 N N N N N N -25.406 37.766 -21.137 -2.748 -3.954 0.455 N32 A1APQ 26 A1APQ N7 N4 N 0 1 Y N N N N N -22.969 36.003 -20.806 -1.906 -1.131 0.440 N7 A1APQ 27 A1APQ N9 N5 N 0 1 Y N N N N N -21.445 35.374 -22.223 -3.124 0.664 0.279 N9 A1APQ 28 A1APQ O27 O1 O 0 1 N N N N N N -23.316 36.880 -13.841 6.615 0.105 -1.816 O27 A1APQ 29 A1APQ O29 O2 O 0 1 N N N N N N -23.209 34.364 -12.835 5.132 -2.282 -1.244 O29 A1APQ 30 A1APQ O31 O3 O 0 1 N N N N N N -24.689 37.945 -23.313 -4.814 -3.202 0.148 O31 A1APQ 31 A1APQ O4 O4 O 0 1 N N N N N N -21.270 36.058 -25.046 -6.198 -0.531 0.797 O4 A1APQ 32 A1APQ H12 H1 H 0 1 N N N N N N -23.674 38.388 -26.837 -7.484 0.091 -2.683 H12 A1APQ 33 A1APQ H11 H2 H 0 1 N N N N N N -21.900 38.165 -26.664 -7.826 -0.950 -1.280 H11 A1APQ 34 A1APQ H13 H3 H 0 1 N N N N N N -22.945 36.764 -27.081 -7.682 0.811 -1.067 H13 A1APQ 35 A1APQ H101 H4 H 0 0 N N N N N N -19.860 34.866 -23.680 -4.661 2.125 0.590 H101 A1APQ 36 A1APQ H112 H5 H 0 0 N N N N N N -20.663 32.714 -22.249 -2.688 2.445 -1.536 H112 A1APQ 37 A1APQ H111 H6 H 0 0 N N N N N N -19.002 33.003 -22.871 -3.589 3.852 -0.826 H111 A1APQ 38 A1APQ H121 H7 H 0 0 N N N N N N -18.458 33.019 -20.749 -1.525 4.289 0.370 H121 A1APQ 39 A1APQ H131 H8 H 0 0 N N N N N N -19.354 35.714 -20.992 -3.286 3.678 1.885 H131 A1APQ 40 A1APQ H132 H9 H 0 0 N N N N N N -18.123 34.969 -22.067 -2.273 2.209 2.208 H132 A1APQ 41 A1APQ H161 H10 H 0 0 N N N N N N -23.014 35.407 -18.744 0.563 -0.815 0.439 H161 A1APQ 42 A1APQ H181 H11 H 0 0 N N N N N N -20.328 32.848 -16.617 2.636 2.758 -0.685 H181 A1APQ 43 A1APQ H191 H12 H 0 0 N N N N N N -18.982 32.557 -18.671 0.561 4.028 -0.462 H191 A1APQ 44 A1APQ H232 H13 H 0 0 N N N N N N -25.683 33.531 -13.017 4.762 -1.835 1.728 H232 A1APQ 45 A1APQ H231 H14 H 0 0 N N N N N N -25.478 33.176 -14.767 6.168 -2.688 1.009 H231 A1APQ 46 A1APQ H241 H15 H 0 0 N N N N N N -26.750 34.688 -15.314 6.013 0.103 2.186 H241 A1APQ 47 A1APQ H242 H16 H 0 0 N N N N N N -27.223 34.757 -13.582 7.380 -1.049 2.197 H242 A1APQ 48 A1APQ H283 H17 H 0 0 N N N N N N -25.664 38.383 -14.091 8.494 1.214 -0.643 H283 A1APQ 49 A1APQ H282 H18 H 0 0 N N N N N N -26.920 37.682 -15.167 8.141 1.735 1.022 H282 A1APQ 50 A1APQ H281 H19 H 0 0 N N N N N N -27.132 37.626 -13.385 9.168 0.310 0.735 H281 A1APQ 51 A1APQ H21 H20 H 0 1 N N N N N N -23.818 37.817 -24.560 -5.247 -0.159 -2.118 H21 A1APQ 52 A1APQ H322 H21 H 0 0 N N N N N N -26.205 38.347 -21.292 -1.806 -3.755 0.571 H322 A1APQ 53 A1APQ H321 H22 H 0 0 N N N N N N -25.238 37.379 -20.230 -3.052 -4.875 0.456 H321 A1APQ 54 A1APQ H291 H23 H 0 0 N N N N N N -22.760 35.122 -12.479 4.917 -2.001 -2.144 H291 A1APQ 55 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1APQ N2 C1 SING N N 1 A1APQ C3 N2 SING N N 2 A1APQ O4 C3 DOUB N N 3 A1APQ C5 C3 SING N N 4 A1APQ C6 C5 DOUB Y N 5 A1APQ C8 N7 DOUB Y N 6 A1APQ N9 C8 SING Y N 7 A1APQ C10 N9 SING N N 8 A1APQ C11 C10 SING N N 9 A1APQ C12 C11 SING N N 10 A1APQ C13 C12 SING N N 11 A1APQ C14 C12 SING N N 12 A1APQ C15 C14 DOUB Y N 13 A1APQ C16 C15 SING Y N 14 A1APQ C17 C16 DOUB Y N 15 A1APQ C19 C18 DOUB Y N 16 A1APQ C18 C17 SING Y N 17 A1APQ C20 C17 SING N N 18 A1APQ C21 C20 TRIP N N 19 A1APQ C22 C21 SING N N 20 A1APQ C24 C23 SING N N 21 A1APQ N25 C24 SING N N 22 A1APQ O27 C26 DOUB N N 23 A1APQ C26 N25 SING N N 24 A1APQ C28 N25 SING N N 25 A1APQ C23 C22 SING N N 26 A1APQ O29 C22 SING N N 27 A1APQ N7 C6 SING Y N 28 A1APQ C30 C6 SING N N 29 A1APQ O31 C30 DOUB N N 30 A1APQ N32 C30 SING N N 31 A1APQ C5 N9 SING Y N 32 A1APQ C8 C15 SING N N 33 A1APQ C10 C13 SING N N 34 A1APQ C14 C19 SING Y N 35 A1APQ C22 C26 SING N N 36 A1APQ C1 H12 SING N N 37 A1APQ C1 H11 SING N N 38 A1APQ C1 H13 SING N N 39 A1APQ C10 H101 SING N N 40 A1APQ C11 H112 SING N N 41 A1APQ C11 H111 SING N N 42 A1APQ C12 H121 SING N N 43 A1APQ C13 H131 SING N N 44 A1APQ C13 H132 SING N N 45 A1APQ C16 H161 SING N N 46 A1APQ C18 H181 SING N N 47 A1APQ C19 H191 SING N N 48 A1APQ C23 H232 SING N N 49 A1APQ C23 H231 SING N N 50 A1APQ C24 H241 SING N N 51 A1APQ C24 H242 SING N N 52 A1APQ C28 H283 SING N N 53 A1APQ C28 H282 SING N N 54 A1APQ C28 H281 SING N N 55 A1APQ N2 H21 SING N N 56 A1APQ N32 H322 SING N N 57 A1APQ N32 H321 SING N N 58 A1APQ O29 H291 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1APQ SMILES ACDLabs 12.01 "OC1(C#Cc2ccc3C4CC(C4)n4c(C(=O)NC)c(nc4c3c2)C(N)=O)CCN(C)C1=O" A1APQ InChI InChI 1.06 "InChI=1S/C23H23N5O4/c1-25-21(30)18-17(19(24)29)26-20-16-9-12(5-6-23(32)7-8-27(2)22(23)31)3-4-15(16)13-10-14(11-13)28(18)20/h3-4,9,13-14,32H,7-8,10-11H2,1-2H3,(H2,24,29)(H,25,30)/t13-,14+,23-/m0/s1" A1APQ InChIKey InChI 1.06 CAWYRWKRCFJCIM-UDFDBXRZSA-N A1APQ SMILES_CANONICAL CACTVS 3.385 "CNC(=O)c1n2C3CC(C3)c4ccc(cc4c2nc1C(N)=O)C#C[C@]5(O)CCN(C)C5=O" A1APQ SMILES CACTVS 3.385 "CNC(=O)c1n2C3CC(C3)c4ccc(cc4c2nc1C(N)=O)C#C[C]5(O)CCN(C)C5=O" A1APQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CNC(=O)c1c(nc-2n1C3CC(C3)c4c2cc(cc4)C#C[C@@]5(CCN(C5=O)C)O)C(=O)N" A1APQ SMILES "OpenEye OEToolkits" 2.0.7 "CNC(=O)c1c(nc-2n1C3CC(C3)c4c2cc(cc4)C#CC5(CCN(C5=O)C)O)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1APQ "SYSTEMATIC NAME" ACDLabs 12.01 "(4S,5R,7R,11aP)-10-{[(3R)-3-hydroxy-1-methyl-2-oxopyrrolidin-3-yl]ethynyl}-N~3~-methyl-6,7-dihydro-5H-5,7-methanoimidazo[2,1-a][2]benzazepine-2,3-dicarboxamide" A1APQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}3-methyl-10-[2-[(3~{R})-1-methyl-3-oxidanyl-2-oxidanylidene-pyrrolidin-3-yl]ethynyl]-5,6,7,12-tetrahydro-5,7-methanobenzo[c]imidazo[1,2-a]azepine-2,3-dicarboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1APQ "Create component" 2024-04-25 RCSB A1APQ "Initial release" 2024-10-02 RCSB #