data_A1AQ3 # _chem_comp.id A1AQ3 _chem_comp.name "benzyl (2S,4S)-4-tert-butoxy-2-({(2R)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}carbamoyl)pyrrolidine-1-carboxylate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H35 N3 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-05-10 _chem_comp.pdbx_modified_date 2025-05-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 461.551 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AQ3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9BQG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AQ3 C1 C1 C 0 1 N N N N N N -10.486 -18.505 -18.862 -2.737 2.503 0.342 C1 A1AQ3 1 A1AQ3 C10 C2 C 0 1 N N N N N N -5.102 -13.939 -18.638 -2.897 -4.095 1.002 C10 A1AQ3 2 A1AQ3 C11 C3 C 0 1 N N N N N N -4.340 -14.538 -17.468 -2.758 -5.391 0.199 C11 A1AQ3 3 A1AQ3 C12 C4 C 0 1 N N N N N N -9.920 -16.137 -18.295 -1.250 0.646 0.151 C12 A1AQ3 4 A1AQ3 C13 C5 C 0 1 N N N N N N -8.276 -14.967 -19.764 -1.894 -1.592 -0.788 C13 A1AQ3 5 A1AQ3 C14 C6 C 0 1 N N S N N N -9.403 -13.804 -17.946 0.353 -1.274 -0.028 C14 A1AQ3 6 A1AQ3 C15 C7 C 0 1 N N N N N N -10.810 -13.306 -18.075 1.389 -0.550 -0.848 C15 A1AQ3 7 A1AQ3 C16 C8 C 0 1 N N R N N N -7.422 -13.784 -19.359 -1.318 -2.982 -0.418 C16 A1AQ3 8 A1AQ3 C17 C9 C 0 1 N N S N N N -12.680 -12.287 -16.993 3.707 -0.021 -1.380 C17 A1AQ3 9 A1AQ3 C18 C10 C 0 1 N N N N N N -4.914 -12.425 -18.698 -4.048 -3.264 0.432 C18 A1AQ3 10 A1AQ3 C19 C11 C 0 1 N N N N N N -13.567 -13.056 -16.002 4.978 0.164 -0.548 C19 A1AQ3 11 A1AQ3 C20 C12 C 0 1 N N S N N N -13.569 -14.528 -16.396 4.672 1.053 0.659 C20 A1AQ3 12 A1AQ3 C21 C13 C 0 1 N N N N N N -14.341 -14.781 -17.686 4.299 2.481 0.199 C21 A1AQ3 13 A1AQ3 C22 C14 C 0 1 N N N N N N -15.163 -16.047 -17.418 4.940 3.346 1.308 C22 A1AQ3 14 A1AQ3 C23 C15 C 0 1 N N N N N N -4.592 -14.582 -19.921 -3.185 -4.431 2.466 C23 A1AQ3 15 A1AQ3 C24 C16 C 0 1 N N N N N N -14.292 -15.377 -15.386 5.913 1.246 1.502 C24 A1AQ3 16 A1AQ3 C3 C17 C 0 1 Y N N N N N -11.927 -18.378 -19.296 -4.170 2.862 0.045 C3 A1AQ3 17 A1AQ3 C34 C18 C 0 1 N N N N N N -8.422 -12.883 -18.658 0.208 -2.727 -0.528 C34 A1AQ3 18 A1AQ3 C4 C19 C 0 1 Y N N N N N -12.850 -19.325 -18.873 -5.146 2.660 1.004 C4 A1AQ3 19 A1AQ3 C5 C20 C 0 1 Y N N N N N -14.176 -19.209 -19.278 -6.460 2.989 0.732 C5 A1AQ3 20 A1AQ3 C6 C21 C 0 1 Y N N N N N -14.577 -18.155 -20.094 -6.800 3.520 -0.498 C6 A1AQ3 21 A1AQ3 C7 C22 C 0 1 Y N N N N N -13.650 -17.208 -20.520 -5.825 3.723 -1.456 C7 A1AQ3 22 A1AQ3 C8 C23 C 0 1 N N N N N N -12.548 -10.802 -16.680 4.032 -0.840 -2.631 C8 A1AQ3 23 A1AQ3 C9 C24 C 0 1 Y N N N N N -12.326 -17.322 -20.115 -4.509 3.399 -1.183 C9 A1AQ3 24 A1AQ3 N13 N1 N 0 1 N N N N N N -9.236 -15.058 -18.663 -0.956 -0.624 -0.190 N13 A1AQ3 25 A1AQ3 N16 N2 N 0 1 N N N N N N -11.347 -12.842 -16.966 2.700 -0.724 -0.583 N16 A1AQ3 26 A1AQ3 N23 N3 N 0 1 N N N N N N -15.155 -16.207 -15.979 6.041 2.539 1.847 N23 A1AQ3 27 A1AQ3 O11 O1 O 0 1 N N N N N N -9.812 -17.286 -19.160 -2.492 1.127 -0.049 O11 A1AQ3 28 A1AQ3 O26 O2 O 0 1 N N N N N N -14.089 -15.311 -14.190 6.680 0.363 1.822 O26 A1AQ3 29 A1AQ3 O3 O3 O 0 1 N N N N N N -6.473 -14.261 -18.420 -1.681 -3.348 0.915 O3 A1AQ3 30 A1AQ3 O33 O4 O 0 1 N N N N N N -10.608 -16.199 -17.283 -0.394 1.358 0.638 O33 A1AQ3 31 A1AQ3 O38 O5 O 0 1 N N N N N N -11.412 -13.356 -19.144 1.045 0.189 -1.745 O38 A1AQ3 32 A1AQ3 O9 O6 O 0 1 N N N N N N -13.822 -10.168 -16.613 4.646 -2.072 -2.247 O9 A1AQ3 33 A1AQ3 H12 H1 H 0 1 N N N N N N -10.441 -18.699 -17.780 -2.074 3.163 -0.218 H12 A1AQ3 34 A1AQ3 H1 H2 H 0 1 N N N N N N -10.008 -19.335 -19.403 -2.547 2.618 1.409 H1 A1AQ3 35 A1AQ3 H11 H3 H 0 1 N N N N N N -3.267 -14.322 -17.579 -1.938 -5.983 0.605 H11 A1AQ3 36 A1AQ3 H111 H4 H 0 0 N N N N N N -4.707 -14.099 -16.528 -3.685 -5.960 0.266 H111 A1AQ3 37 A1AQ3 H112 H5 H 0 0 N N N N N N -4.494 -15.627 -17.449 -2.552 -5.151 -0.844 H112 A1AQ3 38 A1AQ3 H13 H6 H 0 1 N N N N N N -7.673 -15.884 -19.842 -1.925 -1.471 -1.871 H13 A1AQ3 39 A1AQ3 H131 H7 H 0 0 N N N N N N -8.785 -14.780 -20.721 -2.890 -1.469 -0.364 H131 A1AQ3 40 A1AQ3 H14 H8 H 0 1 N N N N N N -9.126 -13.910 -16.887 0.643 -1.271 1.023 H14 A1AQ3 41 A1AQ3 H16 H9 H 0 1 N N N N N N -6.966 -13.290 -20.230 -1.640 -3.741 -1.131 H16 A1AQ3 42 A1AQ3 H17 H10 H 0 1 N N N N N N -13.107 -12.397 -18.001 3.321 0.955 -1.675 H17 A1AQ3 43 A1AQ3 H18 H11 H 0 1 N N N N N N -3.852 -12.193 -18.867 -3.842 -3.024 -0.611 H18 A1AQ3 44 A1AQ3 H182 H12 H 0 0 N N N N N N -5.514 -12.014 -19.523 -4.975 -3.833 0.499 H182 A1AQ3 45 A1AQ3 H181 H13 H 0 0 N N N N N N -5.241 -11.977 -17.748 -4.147 -2.341 1.004 H181 A1AQ3 46 A1AQ3 H191 H14 H 0 0 N N N N N N -13.167 -12.945 -14.983 5.331 -0.808 -0.204 H191 A1AQ3 47 A1AQ3 H19 H15 H 0 1 N N N N N N -14.593 -12.661 -16.038 5.748 0.635 -1.160 H19 A1AQ3 48 A1AQ3 H20 H16 H 0 1 N N N N N N -12.534 -14.882 -16.510 3.867 0.622 1.255 H20 A1AQ3 49 A1AQ3 H211 H17 H 0 0 N N N N N N -15.003 -13.932 -17.913 4.739 2.705 -0.773 H211 A1AQ3 50 A1AQ3 H21 H18 H 0 1 N N N N N N -13.648 -14.941 -18.525 3.218 2.614 0.177 H21 A1AQ3 51 A1AQ3 H22 H19 H 0 1 N N N N N N -16.192 -15.924 -17.787 5.324 4.275 0.887 H22 A1AQ3 52 A1AQ3 H221 H20 H 0 0 N N N N N N -14.700 -16.918 -17.906 4.211 3.558 2.089 H221 A1AQ3 53 A1AQ3 H232 H21 H 0 0 N N N N N N -3.534 -14.320 -20.068 -3.284 -3.508 3.038 H232 A1AQ3 54 A1AQ3 H23 H22 H 0 1 N N N N N N -4.692 -15.675 -19.848 -4.112 -5.000 2.532 H23 A1AQ3 55 A1AQ3 H231 H23 H 0 0 N N N N N N -5.182 -14.216 -20.774 -2.365 -5.023 2.872 H231 A1AQ3 56 A1AQ3 H341 H24 H 0 0 N N N N N N -8.951 -12.258 -19.392 0.540 -2.813 -1.563 H341 A1AQ3 57 A1AQ3 H34 H25 H 0 1 N N N N N N -7.908 -12.238 -17.930 0.761 -3.412 0.114 H34 A1AQ3 58 A1AQ3 H4 H26 H 0 1 N N N N N N -12.542 -20.142 -18.237 -4.880 2.244 1.965 H4 A1AQ3 59 A1AQ3 H5 H27 H 0 1 N N N N N N -14.900 -19.943 -18.957 -7.222 2.830 1.481 H5 A1AQ3 60 A1AQ3 H6 H28 H 0 1 N N N N N N -15.610 -18.072 -20.397 -7.827 3.776 -0.711 H6 A1AQ3 61 A1AQ3 H7 H29 H 0 1 N N N N N N -13.957 -16.393 -21.159 -6.090 4.137 -2.418 H7 A1AQ3 62 A1AQ3 H81 H30 H 0 1 N N N N N N -12.039 -10.684 -15.712 3.112 -1.047 -3.178 H81 A1AQ3 63 A1AQ3 H8 H31 H 0 1 N N N N N N -11.951 -10.322 -17.469 4.714 -0.277 -3.268 H8 A1AQ3 64 A1AQ3 H9 H32 H 0 1 N N N N N N -11.601 -16.588 -20.436 -3.747 3.558 -1.931 H9 A1AQ3 65 A1AQ3 HN16 H33 H 0 0 N N N N N N -10.834 -12.874 -16.108 2.975 -1.315 0.135 HN16 A1AQ3 66 A1AQ3 HN23 H34 H 0 0 N N N N N N -15.728 -16.862 -15.487 6.768 2.893 2.382 HN23 A1AQ3 67 A1AQ3 HO9 H35 H 0 1 N N N N N N -13.707 -9.246 -16.417 4.879 -2.644 -2.992 HO9 A1AQ3 68 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AQ3 C6 C5 DOUB Y N 1 A1AQ3 C6 C7 SING Y N 2 A1AQ3 C5 C4 SING Y N 3 A1AQ3 C4 C3 DOUB Y N 4 A1AQ3 C7 C9 DOUB Y N 5 A1AQ3 C9 C3 SING Y N 6 A1AQ3 C3 C1 SING N N 7 A1AQ3 C1 O11 SING N N 8 A1AQ3 O11 C12 SING N N 9 A1AQ3 O33 C12 DOUB N N 10 A1AQ3 C12 N13 SING N N 11 A1AQ3 N13 C14 SING N N 12 A1AQ3 N13 C13 SING N N 13 A1AQ3 C34 C14 SING N N 14 A1AQ3 C14 C15 SING N N 15 A1AQ3 C16 C34 SING N N 16 A1AQ3 C13 C16 SING N N 17 A1AQ3 O3 C16 SING N N 18 A1AQ3 O38 C15 DOUB N N 19 A1AQ3 C15 N16 SING N N 20 A1AQ3 N16 C17 SING N N 21 A1AQ3 C8 C17 SING N N 22 A1AQ3 C17 C19 SING N N 23 A1AQ3 O9 C8 SING N N 24 A1AQ3 C19 C20 SING N N 25 A1AQ3 C20 C21 SING N N 26 A1AQ3 C20 C24 SING N N 27 A1AQ3 C21 C22 SING N N 28 A1AQ3 C22 N23 SING N N 29 A1AQ3 N23 C24 SING N N 30 A1AQ3 C24 O26 DOUB N N 31 A1AQ3 C10 O3 SING N N 32 A1AQ3 C11 C10 SING N N 33 A1AQ3 C18 C10 SING N N 34 A1AQ3 C23 C10 SING N N 35 A1AQ3 C1 H12 SING N N 36 A1AQ3 C1 H1 SING N N 37 A1AQ3 C11 H11 SING N N 38 A1AQ3 C11 H111 SING N N 39 A1AQ3 C11 H112 SING N N 40 A1AQ3 C13 H13 SING N N 41 A1AQ3 C13 H131 SING N N 42 A1AQ3 C14 H14 SING N N 43 A1AQ3 C16 H16 SING N N 44 A1AQ3 C17 H17 SING N N 45 A1AQ3 C18 H18 SING N N 46 A1AQ3 C18 H182 SING N N 47 A1AQ3 C18 H181 SING N N 48 A1AQ3 C19 H191 SING N N 49 A1AQ3 C19 H19 SING N N 50 A1AQ3 C20 H20 SING N N 51 A1AQ3 C21 H211 SING N N 52 A1AQ3 C21 H21 SING N N 53 A1AQ3 C22 H22 SING N N 54 A1AQ3 C22 H221 SING N N 55 A1AQ3 C23 H232 SING N N 56 A1AQ3 C23 H23 SING N N 57 A1AQ3 C23 H231 SING N N 58 A1AQ3 C34 H341 SING N N 59 A1AQ3 C34 H34 SING N N 60 A1AQ3 C4 H4 SING N N 61 A1AQ3 C5 H5 SING N N 62 A1AQ3 C6 H6 SING N N 63 A1AQ3 C7 H7 SING N N 64 A1AQ3 C8 H81 SING N N 65 A1AQ3 C8 H8 SING N N 66 A1AQ3 C9 H9 SING N N 67 A1AQ3 N16 HN16 SING N N 68 A1AQ3 N23 HN23 SING N N 69 A1AQ3 O9 HO9 SING N N 70 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AQ3 SMILES ACDLabs 12.01 "O=C1NCCC1CC(CO)NC(=O)C1CC(CN1C(=O)OCc1ccccc1)OC(C)(C)C" A1AQ3 InChI InChI 1.06 "InChI=1S/C24H35N3O6/c1-24(2,3)33-19-12-20(22(30)26-18(14-28)11-17-9-10-25-21(17)29)27(13-19)23(31)32-15-16-7-5-4-6-8-16/h4-8,17-20,28H,9-15H2,1-3H3,(H,25,29)(H,26,30)/t17-,18+,19?,20-/m0/s1" A1AQ3 InChIKey InChI 1.06 AZFXZMWDOMBITR-XNMUZJSGSA-N A1AQ3 SMILES_CANONICAL CACTVS 3.385 "CC(C)(C)O[C@@H]1C[C@H](N(C1)C(=O)OCc2ccccc2)C(=O)N[C@H](CO)C[C@@H]3CCNC3=O" A1AQ3 SMILES CACTVS 3.385 "CC(C)(C)O[CH]1C[CH](N(C1)C(=O)OCc2ccccc2)C(=O)N[CH](CO)C[CH]3CCNC3=O" A1AQ3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(C)O[C@@H]1C[C@H](N(C1)C(=O)OCc2ccccc2)C(=O)N[C@@H](C[C@@H]3CCNC3=O)CO" A1AQ3 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)(C)OC1CC(N(C1)C(=O)OCc2ccccc2)C(=O)NC(CC3CCNC3=O)CO" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AQ3 "SYSTEMATIC NAME" ACDLabs 12.01 "benzyl (2S,4S)-4-tert-butoxy-2-({(2R)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}carbamoyl)pyrrolidine-1-carboxylate" A1AQ3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(phenylmethyl) (2~{S},4~{R})-4-[(2-methylpropan-2-yl)oxy]-2-[[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]carbamoyl]pyrrolidine-1-carboxylate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AQ3 "Create component" 2024-05-10 RCSB A1AQ3 "Modify PCM" 2024-09-27 PDBE A1AQ3 "Initial release" 2025-05-14 RCSB # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1AQ3 _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C8 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #