data_A1AR5 # _chem_comp.id A1AR5 _chem_comp.name "2,2-dichloro-N-(5-chloropyridin-3-yl)-N-phenylacetamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H9 Cl3 N2 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-05-15 _chem_comp.pdbx_modified_date 2025-05-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 315.582 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AR5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9BSA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AR5 C10 C1 C 0 1 Y N N N N N -10.456 -9.453 -20.522 -1.065 1.202 0.112 C10 A1AR5 1 A1AR5 C13 C2 C 0 1 Y N N N N N -10.703 -8.773 -23.209 -2.862 3.253 -0.357 C13 A1AR5 2 A1AR5 C15 C3 C 0 1 Y N N N N N -9.526 -8.606 -21.122 -2.140 1.395 0.970 C15 A1AR5 3 A1AR5 C01 C4 C 0 1 Y N N N N N -7.709 -12.354 -18.216 3.487 -0.009 -0.133 C01 A1AR5 4 A1AR5 C02 C5 C 0 1 Y N N N N N -8.590 -13.354 -17.809 3.859 1.069 0.650 C02 A1AR5 5 A1AR5 C04 C6 C 0 1 Y N N N N N -10.427 -12.041 -18.252 1.669 1.509 1.215 C04 A1AR5 6 A1AR5 C05 C7 C 0 1 Y N N N N N -9.617 -10.995 -18.690 1.216 0.448 0.441 C05 A1AR5 7 A1AR5 C06 C8 C 0 1 Y N N N N N -8.229 -11.141 -18.673 2.143 -0.332 -0.244 C06 A1AR5 8 A1AR5 C09 C9 C 0 1 N N N N N N -10.648 -8.805 -18.091 -0.592 -1.098 0.498 C09 A1AR5 9 A1AR5 C11 C10 C 0 1 Y N N N N N -11.514 -9.962 -21.268 -0.894 2.041 -0.982 C11 A1AR5 10 A1AR5 C12 C11 C 0 1 Y N N N N N -11.633 -9.617 -22.612 -1.793 3.064 -1.213 C12 A1AR5 11 A1AR5 C14 C12 C 0 1 Y N N N N N -9.644 -8.264 -22.466 -3.035 2.420 0.733 C14 A1AR5 12 A1AR5 C16 C13 C 0 1 N N N N N N -10.381 -9.079 -16.602 -2.063 -1.404 0.380 C16 A1AR5 13 A1AR5 N03 N1 N 0 1 Y N N N N N -9.905 -13.180 -17.830 2.956 1.785 1.290 N03 A1AR5 14 A1AR5 N08 N2 N 0 1 N N N N N N -10.252 -9.764 -19.118 -0.153 0.168 0.352 N08 A1AR5 15 A1AR5 O17 O1 O 0 1 N N N N N N -11.168 -7.785 -18.419 0.197 -1.992 0.724 O17 A1AR5 16 A1AR5 CL07 CL1 CL 0 0 N N N N N N -5.934 -12.621 -18.168 4.687 -0.942 -0.971 CL07 A1AR5 17 A1AR5 H131 H1 H 0 0 N N N N N N -10.804 -8.512 -24.252 -3.563 4.054 -0.539 H131 A1AR5 18 A1AR5 H151 H2 H 0 0 N N N N N N -8.707 -8.212 -20.539 -2.276 0.744 1.821 H151 A1AR5 19 A1AR5 H021 H3 H 0 0 N N N N N N -8.191 -14.297 -17.467 4.904 1.328 0.738 H021 A1AR5 20 A1AR5 H041 H4 H 0 0 N N N N N N -11.500 -11.919 -18.257 0.959 2.121 1.751 H041 A1AR5 21 A1AR5 H061 H5 H 0 0 N N N N N N -7.579 -10.343 -19.002 1.824 -1.168 -0.849 H061 A1AR5 22 A1AR5 H111 H6 H 0 0 N N N N N N -12.237 -10.619 -20.809 -0.059 1.894 -1.650 H111 A1AR5 23 A1AR5 H121 H7 H 0 0 N N N N N N -12.454 -10.008 -23.195 -1.660 3.716 -2.063 H121 A1AR5 24 A1AR5 H141 H8 H 0 0 N N N N N N -8.920 -7.609 -22.927 -3.871 2.570 1.400 H141 A1AR5 25 A1AR5 H1 H9 H 0 1 N N N N N N -10.981 -9.718 -15.938 -2.597 -0.945 1.212 H1 A1AR5 26 A1AR5 CL1 CL2 CL 0 0 N Y N N N N -8.972 -8.796 -16.569 -2.691 -0.742 -1.175 CL1 A1AR5 27 A1AR5 CL2 CL3 CL 0 0 N Y N N N N ? ? ? -2.311 -3.189 0.417 CL2 A1AR5 28 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AR5 C01 C02 DOUB Y N 1 A1AR5 C02 N03 SING Y N 2 A1AR5 N03 C04 DOUB Y N 3 A1AR5 C04 C05 SING Y N 4 A1AR5 C05 C06 DOUB Y N 5 A1AR5 C06 C01 SING Y N 6 A1AR5 C01 CL07 SING N N 7 A1AR5 C05 N08 SING N N 8 A1AR5 N08 C09 SING N N 9 A1AR5 N08 C10 SING N N 10 A1AR5 C10 C11 DOUB Y N 11 A1AR5 C11 C12 SING Y N 12 A1AR5 C12 C13 DOUB Y N 13 A1AR5 C13 C14 SING Y N 14 A1AR5 C14 C15 DOUB Y N 15 A1AR5 C15 C10 SING Y N 16 A1AR5 C09 C16 SING N N 17 A1AR5 C09 O17 DOUB N N 18 A1AR5 C13 H131 SING N N 19 A1AR5 C15 H151 SING N N 20 A1AR5 C02 H021 SING N N 21 A1AR5 C04 H041 SING N N 22 A1AR5 C06 H061 SING N N 23 A1AR5 C11 H111 SING N N 24 A1AR5 C12 H121 SING N N 25 A1AR5 C14 H141 SING N N 26 A1AR5 C16 H1 SING N N 27 A1AR5 C16 CL1 SING N N 28 A1AR5 C16 CL2 SING N N 29 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AR5 SMILES ACDLabs 12.01 "Clc1cc(cnc1)N(C(=O)C(Cl)Cl)c1ccccc1" A1AR5 InChI InChI 1.06 "InChI=1S/C13H9Cl3N2O/c14-9-6-11(8-17-7-9)18(13(19)12(15)16)10-4-2-1-3-5-10/h1-8,12H" A1AR5 InChIKey InChI 1.06 ZQXHOKOBTZIKQF-UHFFFAOYSA-N A1AR5 SMILES_CANONICAL CACTVS 3.385 "ClC(Cl)C(=O)N(c1ccccc1)c2cncc(Cl)c2" A1AR5 SMILES CACTVS 3.385 "ClC(Cl)C(=O)N(c1ccccc1)c2cncc(Cl)c2" A1AR5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)N(c2cc(cnc2)Cl)C(=O)C(Cl)Cl" A1AR5 SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)N(c2cc(cnc2)Cl)C(=O)C(Cl)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AR5 "SYSTEMATIC NAME" ACDLabs 12.01 "2,2-dichloro-N-(5-chloropyridin-3-yl)-N-phenylacetamide" A1AR5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2,2-bis(chloranyl)-~{N}-(5-chloranylpyridin-3-yl)-~{N}-phenyl-ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AR5 "Create component" 2024-05-15 RCSB A1AR5 "Modify PCM" 2024-09-27 PDBE A1AR5 "Initial release" 2025-05-14 RCSB # loop_ _pdbx_chem_comp_pcm.pcm_id _pdbx_chem_comp_pcm.comp_id _pdbx_chem_comp_pcm.modified_residue_id _pdbx_chem_comp_pcm.type _pdbx_chem_comp_pcm.category _pdbx_chem_comp_pcm.position _pdbx_chem_comp_pcm.polypeptide_position _pdbx_chem_comp_pcm.comp_id_linking_atom _pdbx_chem_comp_pcm.modified_residue_id_linking_atom _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 1 A1AR5 HIS None "Covalent chemical modification" "Amino-acid side chain" "Any position" C16 NE2 ? ? 2 A1AR5 CYS None "Covalent chemical modification" "Amino-acid side chain" "Any position" C16 SG ? ? #