data_A1ARC # _chem_comp.id A1ARC _chem_comp.name "(3Z)-3-[(4-{[(2S)-2-hydroxy-2-(oxan-4-yl)ethyl]carbamoyl}-3,5-dimethyl-1H-pyrrol-2-yl)methylidene]-2-oxo-N-[(1R)-1-phenylethyl]-3,7-dihydro-2H-indole-5-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C32 H36 N4 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-05-13 _chem_comp.pdbx_modified_date 2025-11-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 556.652 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1ARC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9BRM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1ARC C12 C1 C 0 1 N N N N N N 39.293 -8.009 -2.657 8.241 1.221 1.374 C12 A1ARC 1 A1ARC C14 C2 C 0 1 N N N N N N 39.852 -2.576 2.179 4.642 -3.954 -1.267 C14 A1ARC 2 A1ARC C15 C3 C 0 1 N N N N N N 40.480 -3.501 3.061 3.261 -3.496 -0.845 C15 A1ARC 3 A1ARC C16 C4 C 0 1 N N N N N N 40.841 -4.726 2.674 3.117 -2.171 -0.361 C16 A1ARC 4 A1ARC C22 C5 C 0 1 N N N N N N 41.940 -6.613 3.818 1.025 -0.918 0.470 C22 A1ARC 5 A1ARC C23 C6 C 0 1 Y N N N N N 42.511 -7.168 5.154 -0.328 -1.014 0.862 C23 A1ARC 6 A1ARC C25 C7 C 0 1 Y N N N N N 43.710 -7.484 6.936 -2.228 -1.844 1.657 C25 A1ARC 7 A1ARC C26 C8 C 0 1 Y N N N N N 42.660 -8.393 7.028 -2.483 -0.542 1.265 C26 A1ARC 8 A1ARC C27 C9 C 0 1 Y N N N N N 41.873 -8.186 5.891 -1.276 -0.015 0.757 C27 A1ARC 9 A1ARC C28 C10 C 0 1 N N N N N N 40.599 -8.909 5.508 -1.062 1.372 0.208 C28 A1ARC 10 A1ARC C29 C11 C 0 1 N N N N N N 44.826 -7.327 7.953 -3.232 -2.793 2.259 C29 A1ARC 11 A1ARC O21 O1 O 0 1 N N N N N N 41.776 -4.578 5.934 -0.065 -3.669 -0.270 O21 A1ARC 12 A1ARC C33 C12 C 0 1 N N N N N N 43.354 -11.123 9.824 -5.931 0.808 0.430 C33 A1ARC 13 A1ARC C34 C13 C 0 1 N N S N N N 44.556 -11.150 10.740 -6.730 0.586 -0.856 C34 A1ARC 14 A1ARC C35 C14 C 0 1 N N N N N N 45.120 -9.678 11.000 -8.013 1.417 -0.810 C35 A1ARC 15 A1ARC O32 O2 O 0 1 N N N N N N 41.332 -9.578 8.591 -4.050 0.794 2.362 O32 A1ARC 16 A1ARC N31 N1 N 0 1 N N N N N N 43.565 -10.154 8.729 -4.648 0.108 0.336 N31 A1ARC 17 A1ARC C41 C15 C 0 1 N N N N N N 46.475 -9.551 10.400 -8.863 0.982 0.388 C41 A1ARC 18 A1ARC C01 C16 C 0 1 Y N N N N N 43.556 -6.462 -3.712 5.298 4.439 0.577 C01 A1ARC 19 A1ARC C02 C17 C 0 1 Y N N N N N 43.478 -6.559 -5.101 5.980 5.416 -0.123 C02 A1ARC 20 A1ARC C03 C18 C 0 1 Y N N N N N 42.241 -6.667 -5.722 7.161 5.105 -0.770 C03 A1ARC 21 A1ARC C04 C19 C 0 1 Y N N N N N 41.080 -6.677 -4.958 7.660 3.817 -0.717 C04 A1ARC 22 A1ARC C05 C20 C 0 1 Y N N N N N 41.161 -6.586 -3.572 6.978 2.840 -0.017 C05 A1ARC 23 A1ARC C06 C21 C 0 1 Y N N N N N 42.395 -6.474 -2.947 5.800 3.152 0.635 C06 A1ARC 24 A1ARC C07 C22 C 0 1 N N R N N N 39.875 -6.597 -2.748 7.522 1.435 0.041 C07 A1ARC 25 A1ARC C09 C23 C 0 1 N N N N N N 39.754 -4.778 -0.976 6.650 -0.762 -0.550 C09 A1ARC 26 A1ARC C10 C24 C 0 1 N N N N N N 40.023 -4.330 0.464 5.536 -1.727 -0.670 C10 A1ARC 27 A1ARC C13 C25 C 0 1 N N N N N N 39.629 -3.030 0.871 5.783 -2.970 -1.146 C13 A1ARC 28 A1ARC C17 C26 C 0 1 N N N N N N 40.636 -5.227 1.359 4.191 -1.322 -0.274 C17 A1ARC 29 A1ARC C19 C27 C 0 1 N N N N N N 41.378 -4.419 4.830 1.105 -3.340 -0.380 C19 A1ARC 30 A1ARC C20 C28 C 0 1 N N N N N N 41.434 -5.376 3.786 1.676 -2.024 -0.035 C20 A1ARC 31 A1ARC C30 C29 C 0 1 N N N N N N 42.429 -9.409 8.165 -3.774 0.163 1.360 C30 A1ARC 32 A1ARC C37 C30 C 0 1 N N N N N N 45.138 -9.415 12.462 -8.814 1.196 -2.097 C37 A1ARC 33 A1ARC C38 C31 C 0 1 N N N N N N 46.568 -9.354 13.025 -10.132 1.969 -2.008 C38 A1ARC 34 A1ARC C40 C32 C 0 1 N N N N N N 47.266 -8.341 10.912 -10.179 1.764 0.381 C40 A1ARC 35 A1ARC N08 N2 N 0 1 N N N N N N 40.136 -6.132 -1.389 6.418 0.479 -0.078 N08 A1ARC 36 A1ARC N18 N3 N 0 1 N N N N N N 40.797 -3.278 4.378 2.105 -4.109 -0.836 N18 A1ARC 37 A1ARC N24 N4 N 0 1 Y N N N N N 43.576 -6.769 5.820 -0.937 -2.123 1.412 N24 A1ARC 38 A1ARC O11 O3 O 0 1 N N N N N N 39.223 -4.041 -1.734 7.774 -1.088 -0.877 O11 A1ARC 39 A1ARC O36 O4 O 0 1 N N N N N N 45.501 -11.952 10.118 -7.063 -0.798 -0.977 O36 A1ARC 40 A1ARC O39 O5 O 0 1 N N N N N N 47.388 -8.305 12.385 -10.859 1.538 -0.856 O39 A1ARC 41 A1ARC H121 H1 H 0 0 N N N N N N 38.370 -7.988 -2.060 7.538 1.373 2.194 H121 A1ARC 42 A1ARC H122 H2 H 0 0 N N N N N N 39.067 -8.378 -3.668 8.634 0.206 1.416 H122 A1ARC 43 A1ARC H123 H3 H 0 0 N N N N N N 40.024 -8.677 -2.178 9.061 1.933 1.463 H123 A1ARC 44 A1ARC H141 H4 H 0 0 N N N N N N 40.489 -1.681 2.121 4.896 -4.832 -0.674 H141 A1ARC 45 A1ARC H1 H5 H 0 1 N N N N N N 38.878 -2.306 2.612 4.584 -4.268 -2.309 H1 A1ARC 46 A1ARC H221 H6 H 0 0 N N N N N N 41.952 -7.221 2.925 1.550 0.021 0.565 H221 A1ARC 47 A1ARC H283 H7 H 0 0 N N N N N N 39.733 -8.373 5.924 -0.762 2.040 1.014 H283 A1ARC 48 A1ARC H281 H8 H 0 0 N N N N N N 40.514 -8.947 4.412 -0.281 1.345 -0.552 H281 A1ARC 49 A1ARC H282 H9 H 0 0 N N N N N N 40.624 -9.933 5.909 -1.990 1.733 -0.237 H282 A1ARC 50 A1ARC H291 H10 H 0 0 N N N N N N 44.530 -6.588 8.712 -3.724 -3.353 1.464 H291 A1ARC 51 A1ARC H292 H11 H 0 0 N N N N N N 45.018 -8.295 8.439 -2.722 -3.484 2.929 H292 A1ARC 52 A1ARC H293 H12 H 0 0 N N N N N N 45.739 -6.984 7.445 -3.976 -2.226 2.819 H293 A1ARC 53 A1ARC H332 H13 H 0 0 N N N N N N 42.465 -10.830 10.401 -5.754 1.875 0.568 H332 A1ARC 54 A1ARC H331 H14 H 0 0 N N N N N N 43.201 -12.125 9.397 -6.495 0.422 1.279 H331 A1ARC 55 A1ARC H341 H15 H 0 0 N N N N N N 44.259 -11.576 11.710 -6.130 0.891 -1.713 H341 A1ARC 56 A1ARC H351 H16 H 0 0 N N N N N N 44.439 -8.965 10.512 -7.760 2.474 -0.715 H351 A1ARC 57 A1ARC H311 H17 H 0 0 N N N N N N 44.486 -10.004 8.369 -4.428 -0.396 -0.463 H311 A1ARC 58 A1ARC H411 H18 H 0 0 N N N N N N 46.364 -9.457 9.310 -9.072 -0.085 0.317 H411 A1ARC 59 A1ARC H412 H19 H 0 0 N N N N N N 47.045 -10.462 10.634 -8.322 1.187 1.312 H412 A1ARC 60 A1ARC H011 H20 H 0 0 N N N N N N 44.519 -6.378 -3.230 4.375 4.681 1.083 H011 A1ARC 61 A1ARC H021 H21 H 0 0 N N N N N N 44.381 -6.550 -5.694 5.590 6.422 -0.164 H021 A1ARC 62 A1ARC H031 H22 H 0 0 N N N N N N 42.181 -6.743 -6.798 7.694 5.868 -1.317 H031 A1ARC 63 A1ARC H041 H23 H 0 0 N N N N N N 40.116 -6.755 -5.439 8.583 3.574 -1.223 H041 A1ARC 64 A1ARC H061 H24 H 0 0 N N N N N N 42.453 -6.397 -1.871 5.266 2.388 1.182 H061 A1ARC 65 A1ARC H071 H25 H 0 0 N N N N N N 39.137 -5.939 -3.231 8.224 1.284 -0.779 H071 A1ARC 66 A1ARC H131 H26 H 0 0 N N N N N N 39.147 -2.376 0.159 6.783 -3.256 -1.435 H131 A1ARC 67 A1ARC H171 H27 H 0 0 N N N N N N 40.930 -6.225 1.068 4.036 -0.321 0.101 H171 A1ARC 68 A1ARC H371 H28 H 0 0 N N N N N N 44.640 -8.453 12.655 -8.238 1.554 -2.950 H371 A1ARC 69 A1ARC H372 H29 H 0 0 N N N N N N 44.590 -10.220 12.973 -9.022 0.133 -2.218 H372 A1ARC 70 A1ARC H381 H30 H 0 0 N N N N N N 46.513 -9.148 14.104 -9.923 3.036 -1.928 H381 A1ARC 71 A1ARC H382 H31 H 0 0 N N N N N N 47.052 -10.328 12.862 -10.725 1.781 -2.903 H382 A1ARC 72 A1ARC H402 H32 H 0 0 N N N N N N 46.756 -7.424 10.581 -10.806 1.427 1.207 H402 A1ARC 73 A1ARC H401 H33 H 0 0 N N N N N N 48.276 -8.375 10.478 -9.971 2.828 0.493 H401 A1ARC 74 A1ARC H081 H34 H 0 0 N N N N N N 40.580 -6.743 -0.733 5.521 0.739 0.182 H081 A1ARC 75 A1ARC H2 H35 H 0 1 N N N N N N 44.193 -6.037 5.530 -0.501 -2.971 1.592 H2 A1ARC 76 A1ARC H361 H36 H 0 0 N N N N N N 46.281 -12.001 10.658 -7.597 -1.139 -0.246 H361 A1ARC 77 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1ARC C01 C02 DOUB Y N 1 A1ARC C02 C03 SING Y N 2 A1ARC C03 C04 DOUB Y N 3 A1ARC C04 C05 SING Y N 4 A1ARC C05 C06 DOUB Y N 5 A1ARC C06 C01 SING Y N 6 A1ARC C05 C07 SING N N 7 A1ARC C07 N08 SING N N 8 A1ARC N08 C09 SING N N 9 A1ARC C09 C10 SING N N 10 A1ARC C09 O11 DOUB N N 11 A1ARC C07 C12 SING N N 12 A1ARC C10 C13 DOUB N N 13 A1ARC C13 C14 SING N N 14 A1ARC C14 C15 SING N N 15 A1ARC C15 C16 SING N N 16 A1ARC C16 C17 DOUB N N 17 A1ARC C17 C10 SING N N 18 A1ARC C15 N18 DOUB N N 19 A1ARC N18 C19 SING N N 20 A1ARC C19 C20 SING N N 21 A1ARC C20 C16 SING N N 22 A1ARC C19 O21 DOUB N N 23 A1ARC C20 C22 DOUB N Z 24 A1ARC C22 C23 SING N N 25 A1ARC C23 N24 SING Y N 26 A1ARC N24 C25 SING Y N 27 A1ARC C25 C26 DOUB Y N 28 A1ARC C26 C27 SING Y N 29 A1ARC C27 C23 DOUB Y N 30 A1ARC C27 C28 SING N N 31 A1ARC C25 C29 SING N N 32 A1ARC C26 C30 SING N N 33 A1ARC C30 N31 SING N N 34 A1ARC C30 O32 DOUB N N 35 A1ARC N31 C33 SING N N 36 A1ARC C33 C34 SING N N 37 A1ARC C34 C35 SING N N 38 A1ARC C34 O36 SING N N 39 A1ARC C35 C37 SING N N 40 A1ARC C37 C38 SING N N 41 A1ARC C38 O39 SING N N 42 A1ARC O39 C40 SING N N 43 A1ARC C40 C41 SING N N 44 A1ARC C41 C35 SING N N 45 A1ARC C12 H121 SING N N 46 A1ARC C12 H122 SING N N 47 A1ARC C12 H123 SING N N 48 A1ARC C14 H141 SING N N 49 A1ARC C14 H1 SING N N 50 A1ARC C22 H221 SING N N 51 A1ARC C28 H283 SING N N 52 A1ARC C28 H281 SING N N 53 A1ARC C28 H282 SING N N 54 A1ARC C29 H291 SING N N 55 A1ARC C29 H292 SING N N 56 A1ARC C29 H293 SING N N 57 A1ARC C33 H332 SING N N 58 A1ARC C33 H331 SING N N 59 A1ARC C34 H341 SING N N 60 A1ARC C35 H351 SING N N 61 A1ARC N31 H311 SING N N 62 A1ARC C41 H411 SING N N 63 A1ARC C41 H412 SING N N 64 A1ARC C01 H011 SING N N 65 A1ARC C02 H021 SING N N 66 A1ARC C03 H031 SING N N 67 A1ARC C04 H041 SING N N 68 A1ARC C06 H061 SING N N 69 A1ARC C07 H071 SING N N 70 A1ARC C13 H131 SING N N 71 A1ARC C17 H171 SING N N 72 A1ARC C37 H371 SING N N 73 A1ARC C37 H372 SING N N 74 A1ARC C38 H381 SING N N 75 A1ARC C38 H382 SING N N 76 A1ARC C40 H402 SING N N 77 A1ARC C40 H401 SING N N 78 A1ARC N08 H081 SING N N 79 A1ARC N24 H2 SING N N 80 A1ARC O36 H361 SING N N 81 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1ARC SMILES ACDLabs 12.01 "OC(CNC(=O)c1c(C)c(/C=C2/C3=CC(=CCC3=NC2=O)C(=O)NC(C)c2ccccc2)[NH]c1C)C1CCOCC1" A1ARC InChI InChI 1.06 "InChI=1S/C32H36N4O5/c1-18-27(34-20(3)29(18)32(40)33-17-28(37)22-11-13-41-14-12-22)16-25-24-15-23(9-10-26(24)36-31(25)39)30(38)35-19(2)21-7-5-4-6-8-21/h4-9,15-16,19,22,28,34,37H,10-14,17H2,1-3H3,(H,33,40)(H,35,38)/b25-16-/t19-,28-/m1/s1" A1ARC InChIKey InChI 1.06 ZZTIMXSGQZCALR-SKWDJENRSA-N A1ARC SMILES_CANONICAL CACTVS 3.385 "C[C@@H](NC(=O)C1=CCC2=NC(=O)C(=C\c3[nH]c(C)c(C(=O)NC[C@@H](O)C4CCOCC4)c3C)/C2=C1)c5ccccc5" A1ARC SMILES CACTVS 3.385 "C[CH](NC(=O)C1=CCC2=NC(=O)C(=Cc3[nH]c(C)c(C(=O)NC[CH](O)C4CCOCC4)c3C)C2=C1)c5ccccc5" A1ARC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c([nH]c(c1C(=O)NC[C@H](C2CCOCC2)O)C)/C=C\3/C4=CC(=CCC4=NC3=O)C(=O)N[C@H](C)c5ccccc5" A1ARC SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c([nH]c(c1C(=O)NCC(C2CCOCC2)O)C)C=C3C4=CC(=CCC4=NC3=O)C(=O)NC(C)c5ccccc5" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1ARC "SYSTEMATIC NAME" ACDLabs 12.01 "(3Z)-3-[(4-{[(2S)-2-hydroxy-2-(oxan-4-yl)ethyl]carbamoyl}-3,5-dimethyl-1H-pyrrol-2-yl)methylidene]-2-oxo-N-[(1R)-1-phenylethyl]-3,7-dihydro-2H-indole-5-carboxamide" A1ARC "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{Z})-3-[[3,5-dimethyl-4-[[(2~{S})-2-(oxan-4-yl)-2-oxidanyl-ethyl]carbamoyl]-1~{H}-pyrrol-2-yl]methylidene]-2-oxidanylidene-~{N}-[(1~{R})-1-phenylethyl]-7~{H}-indole-5-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1ARC "Create component" 2024-05-13 RCSB A1ARC "Initial release" 2025-11-12 RCSB #