data_A1ARD # _chem_comp.id A1ARD _chem_comp.name "(3Z)-3-[(4-{[2-(dimethylamino)ethyl]carbamoyl}-3,5-dimethyl-1H-pyrrol-2-yl)methylidene]-2-oxo-N-[(1R)-1-phenylethyl]-3,7-dihydro-2H-indole-5-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H33 N5 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-05-13 _chem_comp.pdbx_modified_date 2025-11-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 499.604 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1ARD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9BRN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1ARD C10 C1 C 0 1 N N N N N N 40.404 -4.594 0.380 -4.536 -1.729 -0.159 C10 A1ARD 1 A1ARD C13 C2 C 0 1 N N N N N N 40.022 -3.294 0.715 -4.930 -3.020 -0.075 C13 A1ARD 2 A1ARD C15 C3 C 0 1 N N N N N N 40.823 -3.662 2.987 -2.432 -3.682 0.148 C15 A1ARD 3 A1ARD C17 C4 C 0 1 N N N N N N 40.991 -5.414 1.338 -3.124 -1.363 -0.097 C17 A1ARD 4 A1ARD C20 C5 C 0 1 N N N N N N 41.755 -5.511 3.820 -0.654 -2.208 0.140 C20 A1ARD 5 A1ARD C22 C6 C 0 1 N N N N N N 42.229 -6.751 3.849 0.135 -1.078 0.095 C22 A1ARD 6 A1ARD C26 C7 C 0 1 Y N N N N N 43.484 -8.992 6.530 3.737 -0.838 0.313 C26 A1ARD 7 A1ARD C28 C8 C 0 1 N N N N N N 42.395 -9.885 4.335 2.138 0.908 1.405 C28 A1ARD 8 A1ARD C01 C9 C 0 1 Y N N N N N 43.792 -7.007 -3.629 -3.827 4.516 0.213 C01 A1ARD 9 A1ARD C02 C10 C 0 1 Y N N N N N 43.720 -6.489 -4.912 -4.648 5.366 0.929 C02 A1ARD 10 A1ARD C03 C11 C 0 1 Y N N N N N 42.487 -6.165 -5.455 -5.967 5.020 1.160 C03 A1ARD 11 A1ARD C04 C12 C 0 1 Y N N N N N 41.327 -6.359 -4.721 -6.463 3.825 0.674 C04 A1ARD 12 A1ARD C05 C13 C 0 1 Y N N N N N 41.398 -6.876 -3.437 -5.642 2.975 -0.042 C05 A1ARD 13 A1ARD C06 C14 C 0 1 Y N N N N N 42.632 -7.199 -2.893 -4.325 3.323 -0.278 C06 A1ARD 14 A1ARD C07 C15 C 0 1 N N R N N N 40.118 -7.088 -2.624 -6.183 1.673 -0.572 C07 A1ARD 15 A1ARD C09 C16 C 0 1 N N N N N N 40.188 -5.127 -1.034 -5.554 -0.668 -0.324 C09 A1ARD 16 A1ARD C12 C17 C 0 1 N N N N N N 39.794 -8.576 -2.532 -6.523 1.827 -2.056 C12 A1ARD 17 A1ARD C14 C18 C 0 1 N N N N N N 40.224 -2.820 2.008 -3.886 -4.102 0.087 C14 A1ARD 18 A1ARD C16 C19 C 0 1 N N N N N N 41.199 -4.935 2.655 -2.132 -2.299 0.049 C16 A1ARD 19 A1ARD C19 C20 C 0 1 N N N N N N 41.690 -4.546 4.824 -0.227 -3.613 0.288 C19 A1ARD 20 A1ARD C23 C21 C 0 1 Y N N N N N 42.825 -7.421 5.090 1.541 -1.199 0.041 C23 A1ARD 21 A1ARD C25 C22 C 0 1 Y N N N N N 43.757 -7.726 7.030 3.561 -1.994 -0.426 C25 A1ARD 22 A1ARD C27 C23 C 0 1 Y N N N N N 42.885 -8.798 5.290 2.453 -0.335 0.613 C27 A1ARD 23 A1ARD C29 C24 C 0 1 N N N N N N 44.420 -7.415 8.372 4.664 -2.869 -0.964 C29 A1ARD 24 A1ARD C30 C25 C 0 1 N N N N N N 43.788 -10.327 7.218 5.025 -0.246 0.716 C30 A1ARD 25 A1ARD C32 C26 C 0 1 N N N N N N 45.451 -12.069 7.958 6.911 1.245 0.320 C32 A1ARD 26 A1ARD C33 C27 C 0 1 N N N N N N 45.849 -11.814 9.414 7.379 2.229 -0.754 C33 A1ARD 27 A1ARD C36 C28 C 0 1 N N N N N N 45.848 -9.738 10.585 9.723 1.804 -0.323 C36 A1ARD 28 A1ARD C37 C29 C 0 1 N N N N N N 44.127 -11.320 10.998 9.027 3.937 -1.233 C37 A1ARD 29 A1ARD N08 N1 N 0 1 N N N N N N 40.317 -6.555 -1.287 -5.175 0.622 -0.409 N08 A1ARD 30 A1ARD N18 N2 N 0 1 N N N N N N 41.130 -3.449 4.305 -1.331 -4.376 0.280 N18 A1ARD 31 A1ARD N24 N3 N 0 1 Y N N N N N 43.352 -6.832 6.147 2.244 -2.209 -0.583 N24 A1ARD 32 A1ARD N31 N4 N 0 1 N N N N N N 45.159 -10.807 7.298 5.631 0.656 -0.081 N31 A1ARD 33 A1ARD N35 N5 N 0 1 N N N N N N 45.016 -10.768 9.990 8.662 2.819 -0.352 N35 A1ARD 34 A1ARD O11 O1 O 0 1 N N N N N N 39.914 -4.384 -1.911 -6.732 -0.961 -0.382 O11 A1ARD 35 A1ARD O21 O2 O 0 1 N N N N N N 42.055 -4.646 5.945 0.922 -4.009 0.398 O21 A1ARD 36 A1ARD O34 O3 O 0 1 N N N N N N 42.910 -10.966 7.693 5.540 -0.570 1.769 O34 A1ARD 37 A1ARD H131 H1 H 0 0 N N N N N N 39.569 -2.656 -0.029 -5.978 -3.276 -0.122 H131 A1ARD 38 A1ARD H171 H2 H 0 0 N N N N N N 41.289 -6.419 1.077 -2.851 -0.320 -0.168 H171 A1ARD 39 A1ARD H221 H3 H 0 0 N N N N N N 42.192 -7.326 2.935 -0.323 -0.100 0.101 H221 A1ARD 40 A1ARD H281 H4 H 0 0 N N N N N N 41.344 -10.123 4.558 2.077 1.763 0.732 H281 A1ARD 41 A1ARD H282 H5 H 0 0 N N N N N N 42.478 -9.527 3.298 1.184 0.780 1.917 H282 A1ARD 42 A1ARD H283 H6 H 0 0 N N N N N N 43.010 -10.788 4.461 2.924 1.079 2.140 H283 A1ARD 43 A1ARD H011 H7 H 0 0 N N N N N N 44.751 -7.261 -3.202 -2.796 4.786 0.032 H011 A1ARD 44 A1ARD H021 H8 H 0 0 N N N N N N 44.622 -6.338 -5.487 -4.260 6.299 1.309 H021 A1ARD 45 A1ARD H031 H9 H 0 0 N N N N N N 42.429 -5.760 -6.454 -6.609 5.684 1.721 H031 A1ARD 46 A1ARD H041 H10 H 0 0 N N N N N N 40.368 -6.107 -5.150 -7.493 3.555 0.855 H041 A1ARD 47 A1ARD H061 H11 H 0 0 N N N N N N 42.690 -7.602 -1.893 -3.683 2.659 -0.838 H061 A1ARD 48 A1ARD H071 H12 H 0 0 N N N N N N 39.286 -6.567 -3.120 -7.083 1.401 -0.019 H071 A1ARD 49 A1ARD H123 H13 H 0 0 N N N N N N 38.873 -8.716 -1.946 -7.274 2.608 -2.177 H123 A1ARD 50 A1ARD H122 H14 H 0 0 N N N N N N 39.650 -8.983 -3.544 -5.624 2.098 -2.608 H122 A1ARD 51 A1ARD H121 H15 H 0 0 N N N N N N 40.625 -9.102 -2.040 -6.915 0.885 -2.438 H121 A1ARD 52 A1ARD H141 H16 H 0 0 N N N N N N 40.861 -1.927 1.924 -4.113 -4.648 1.003 H141 A1ARD 53 A1ARD H1 H17 H 0 1 N N N N N N 39.237 -2.531 2.398 -3.997 -4.797 -0.745 H1 A1ARD 54 A1ARD H291 H18 H 0 0 N N N N N N 43.648 -7.317 9.149 4.916 -3.631 -0.227 H291 A1ARD 55 A1ARD H293 H19 H 0 0 N N N N N N 45.107 -8.231 8.639 4.330 -3.349 -1.884 H293 A1ARD 56 A1ARD H292 H20 H 0 0 N N N N N N 44.983 -6.473 8.293 5.543 -2.259 -1.171 H292 A1ARD 57 A1ARD H321 H21 H 0 0 N N N N N N 44.558 -12.710 7.931 7.654 0.455 0.437 H321 A1ARD 58 A1ARD H322 H22 H 0 0 N N N N N N 46.279 -12.571 7.436 6.788 1.771 1.266 H322 A1ARD 59 A1ARD H332 H23 H 0 0 N N N N N N 45.720 -12.740 9.993 7.502 1.703 -1.701 H332 A1ARD 60 A1ARD H331 H24 H 0 0 N N N N N N 46.903 -11.501 9.453 6.636 3.019 -0.871 H331 A1ARD 61 A1ARD H362 H25 H 0 0 N N N N N N 45.209 -8.954 11.017 9.835 1.367 -1.316 H362 A1ARD 62 A1ARD H363 H26 H 0 0 N N N N N N 46.470 -10.181 11.377 10.663 2.268 -0.022 H363 A1ARD 63 A1ARD H361 H27 H 0 0 N N N N N N 46.496 -9.299 9.812 9.459 1.023 0.390 H361 A1ARD 64 A1ARD H372 H28 H 0 0 N N N N N N 43.507 -10.516 11.421 8.257 4.707 -1.181 H372 A1ARD 65 A1ARD H373 H29 H 0 0 N N N N N N 43.478 -12.080 10.538 9.981 4.356 -0.913 H373 A1ARD 66 A1ARD H371 H30 H 0 0 N N N N N N 44.723 -11.783 11.799 9.114 3.578 -2.258 H371 A1ARD 67 A1ARD H081 H31 H 0 0 N N N N N N 40.544 -7.174 -0.535 -4.234 0.856 -0.362 H081 A1ARD 68 A1ARD H2 H32 H 0 1 N N N N N N 43.434 -5.842 6.263 1.850 -2.953 -1.065 H2 A1ARD 69 A1ARD H311 H33 H 0 0 N N N N N N 45.901 -10.269 6.899 5.220 0.915 -0.921 H311 A1ARD 70 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1ARD C01 C02 DOUB Y N 1 A1ARD C02 C03 SING Y N 2 A1ARD C03 C04 DOUB Y N 3 A1ARD C04 C05 SING Y N 4 A1ARD C05 C06 DOUB Y N 5 A1ARD C06 C01 SING Y N 6 A1ARD C05 C07 SING N N 7 A1ARD C07 N08 SING N N 8 A1ARD N08 C09 SING N N 9 A1ARD C09 C10 SING N N 10 A1ARD C09 O11 DOUB N N 11 A1ARD C07 C12 SING N N 12 A1ARD C10 C13 DOUB N N 13 A1ARD C13 C14 SING N N 14 A1ARD C14 C15 SING N N 15 A1ARD C15 C16 SING N N 16 A1ARD C16 C17 DOUB N N 17 A1ARD C17 C10 SING N N 18 A1ARD C15 N18 DOUB N N 19 A1ARD N18 C19 SING N N 20 A1ARD C19 C20 SING N N 21 A1ARD C20 C16 SING N N 22 A1ARD C19 O21 DOUB N N 23 A1ARD C20 C22 DOUB N Z 24 A1ARD C22 C23 SING N N 25 A1ARD C23 N24 SING Y N 26 A1ARD N24 C25 SING Y N 27 A1ARD C25 C26 DOUB Y N 28 A1ARD C26 C27 SING Y N 29 A1ARD C27 C23 DOUB Y N 30 A1ARD C27 C28 SING N N 31 A1ARD C25 C29 SING N N 32 A1ARD C26 C30 SING N N 33 A1ARD C30 N31 SING N N 34 A1ARD N31 C32 SING N N 35 A1ARD C32 C33 SING N N 36 A1ARD C30 O34 DOUB N N 37 A1ARD C33 N35 SING N N 38 A1ARD N35 C36 SING N N 39 A1ARD N35 C37 SING N N 40 A1ARD C13 H131 SING N N 41 A1ARD C17 H171 SING N N 42 A1ARD C22 H221 SING N N 43 A1ARD C28 H281 SING N N 44 A1ARD C28 H282 SING N N 45 A1ARD C28 H283 SING N N 46 A1ARD C01 H011 SING N N 47 A1ARD C02 H021 SING N N 48 A1ARD C03 H031 SING N N 49 A1ARD C04 H041 SING N N 50 A1ARD C06 H061 SING N N 51 A1ARD C07 H071 SING N N 52 A1ARD C12 H123 SING N N 53 A1ARD C12 H122 SING N N 54 A1ARD C12 H121 SING N N 55 A1ARD C14 H141 SING N N 56 A1ARD C14 H1 SING N N 57 A1ARD C29 H291 SING N N 58 A1ARD C29 H293 SING N N 59 A1ARD C29 H292 SING N N 60 A1ARD C32 H321 SING N N 61 A1ARD C32 H322 SING N N 62 A1ARD C33 H332 SING N N 63 A1ARD C33 H331 SING N N 64 A1ARD C36 H362 SING N N 65 A1ARD C36 H363 SING N N 66 A1ARD C36 H361 SING N N 67 A1ARD C37 H372 SING N N 68 A1ARD C37 H373 SING N N 69 A1ARD C37 H371 SING N N 70 A1ARD N08 H081 SING N N 71 A1ARD N24 H2 SING N N 72 A1ARD N31 H311 SING N N 73 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1ARD SMILES ACDLabs 12.01 "CN(C)CCNC(=O)c1c(C)[NH]c(/C=C2\C(=O)N=C3CC=C(C=C23)C(=O)NC(C)c2ccccc2)c1C" A1ARD InChI InChI 1.06 "InChI=1S/C29H33N5O3/c1-17-25(31-19(3)26(17)29(37)30-13-14-34(4)5)16-23-22-15-21(11-12-24(22)33-28(23)36)27(35)32-18(2)20-9-7-6-8-10-20/h6-11,15-16,18,31H,12-14H2,1-5H3,(H,30,37)(H,32,35)/b23-16-/t18-/m1/s1" A1ARD InChIKey InChI 1.06 HKWYOXJKRXXECG-MPGAHLTBSA-N A1ARD SMILES_CANONICAL CACTVS 3.385 "C[C@@H](NC(=O)C1=CCC2=NC(=O)C(=C\c3[nH]c(C)c(C(=O)NCCN(C)C)c3C)/C2=C1)c4ccccc4" A1ARD SMILES CACTVS 3.385 "C[CH](NC(=O)C1=CCC2=NC(=O)C(=Cc3[nH]c(C)c(C(=O)NCCN(C)C)c3C)C2=C1)c4ccccc4" A1ARD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c([nH]c(c1C(=O)NCCN(C)C)C)/C=C\2/C3=CC(=CCC3=NC2=O)C(=O)N[C@H](C)c4ccccc4" A1ARD SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c([nH]c(c1C(=O)NCCN(C)C)C)C=C2C3=CC(=CCC3=NC2=O)C(=O)NC(C)c4ccccc4" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1ARD "SYSTEMATIC NAME" ACDLabs 12.01 "(3Z)-3-[(4-{[2-(dimethylamino)ethyl]carbamoyl}-3,5-dimethyl-1H-pyrrol-2-yl)methylidene]-2-oxo-N-[(1R)-1-phenylethyl]-3,7-dihydro-2H-indole-5-carboxamide" A1ARD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{Z})-3-[[4-[2-(dimethylamino)ethylcarbamoyl]-3,5-dimethyl-1~{H}-pyrrol-2-yl]methylidene]-2-oxidanylidene-~{N}-[(1~{R})-1-phenylethyl]-7~{H}-indole-5-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1ARD "Create component" 2024-05-13 RCSB A1ARD "Initial release" 2025-11-12 RCSB #