data_A1ARI # _chem_comp.id A1ARI _chem_comp.name "O-tert-butyl-N-{[(propan-2-yl)oxy]carbonyl}-L-threonyl-3-cyclohexyl-N-{(2R)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-alaninamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H50 N4 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-05-13 _chem_comp.pdbx_modified_date 2025-05-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 554.719 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1ARI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9BQM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1ARI N N1 N 0 1 N N N N N N -9.799 -15.290 -18.182 -0.650 0.433 1.041 N A1ARI 1 A1ARI C C1 C 0 1 N N S N N N -10.147 -17.647 -18.340 -3.084 0.182 0.676 C A1ARI 2 A1ARI O O1 O 0 1 N N N N N N -10.836 -16.305 -16.466 -1.566 1.157 -0.846 O A1ARI 3 A1ARI C1 C2 C 0 1 N N N N N N -10.296 -16.361 -17.577 -1.713 0.626 0.235 C1 A1ARI 4 A1ARI C10 C3 C 0 1 N N N N N N -14.982 -15.678 -14.970 3.351 -1.496 -1.478 C10 A1ARI 5 A1ARI C11 C4 C 0 1 N N N N N N -9.098 -12.979 -18.355 0.972 2.251 0.836 C11 A1ARI 6 A1ARI C12 C5 C 0 1 N N N N N N -7.749 -12.596 -17.734 2.368 2.609 0.320 C12 A1ARI 7 A1ARI C13 C6 C 0 1 N N R N N N -11.526 -18.230 -18.672 -3.076 -1.329 0.922 C13 A1ARI 8 A1ARI C14 C7 C 0 1 N N N N N N -12.439 -17.163 -19.289 -4.495 -1.799 1.249 C14 A1ARI 9 A1ARI C15 C8 C 0 1 N N N N N N -8.066 -18.839 -17.771 -5.358 0.677 -0.046 C15 A1ARI 10 A1ARI C16 C9 C 0 1 N N N N N N -6.163 -20.239 -17.162 -7.634 1.147 -0.587 C16 A1ARI 11 A1ARI C17 C10 C 0 1 N N N N N N -12.037 -20.554 -19.293 -1.803 -3.148 0.020 C17 A1ARI 12 A1ARI C18 C11 C 0 1 N N N N N N -11.175 -21.281 -18.266 -2.571 -4.109 0.928 C18 A1ARI 13 A1ARI C19 C12 C 0 1 N N N N N N -12.129 -21.374 -20.574 -0.511 -2.711 0.715 C19 A1ARI 14 A1ARI C2 C13 C 0 1 N N S N N N -9.912 -13.994 -17.550 0.696 0.770 0.571 C2 A1ARI 15 A1ARI C20 C14 C 0 1 N N N N N N -13.460 -20.405 -18.754 -1.461 -3.852 -1.295 C20 A1ARI 16 A1ARI C21 C15 C 0 1 N N N N N N -6.715 -12.429 -18.848 2.704 4.048 0.718 C21 A1ARI 17 A1ARI C22 C16 C 0 1 N N N N N N -5.307 -12.070 -18.372 4.100 4.406 0.203 C22 A1ARI 18 A1ARI C23 C17 C 0 1 N N N N N N -5.041 -12.540 -16.950 4.129 4.279 -1.321 C23 A1ARI 19 A1ARI C24 C18 C 0 1 N N N N N N -5.768 -13.848 -16.690 3.792 2.840 -1.719 C24 A1ARI 20 A1ARI C25 C19 C 0 1 N N N N N N -7.283 -13.647 -16.724 2.397 2.482 -1.204 C25 A1ARI 21 A1ARI C26 C20 C 0 1 N N N N N N -6.373 -21.684 -17.588 -7.877 2.616 -0.235 C26 A1ARI 22 A1ARI C27 C21 C 0 1 N N N N N N -5.250 -20.218 -15.950 -8.570 0.734 -1.725 C27 A1ARI 23 A1ARI C3 C22 C 0 1 N N N N N N -11.360 -13.602 -17.470 1.709 -0.070 1.306 C3 A1ARI 24 A1ARI C4 C23 C 0 1 N N S N N N -13.163 -12.568 -16.397 3.904 -1.117 1.456 C4 A1ARI 25 A1ARI C5 C24 C 0 1 N N N N N N -13.108 -11.069 -16.100 4.591 -0.411 2.627 C5 A1ARI 26 A1ARI C6 C25 C 0 1 N N N N N N -14.054 -13.382 -15.457 4.957 -1.555 0.437 C6 A1ARI 27 A1ARI C7 C26 C 0 1 N N S N N N -14.157 -14.846 -15.906 4.286 -2.369 -0.672 C7 A1ARI 28 A1ARI C8 C27 C 0 1 N N N N N N -14.903 -14.998 -17.238 5.336 -2.851 -1.700 C8 A1ARI 29 A1ARI C9 C28 C 0 1 N N N N N N -15.788 -16.232 -17.065 5.269 -1.733 -2.765 C9 A1ARI 30 A1ARI N1 N2 N 0 1 N N N N N N -11.808 -13.069 -16.343 2.959 -0.197 0.818 N1 A1ARI 31 A1ARI N2 N3 N 0 1 N N N N N N -15.853 -16.428 -15.634 3.924 -1.159 -2.646 N2 A1ARI 32 A1ARI N3 N4 N 0 1 N N N N N N -9.355 -18.567 -17.550 -4.061 0.501 -0.368 N3 A1ARI 33 A1ARI O1 O2 O 0 1 N N N N N N -12.120 -13.779 -18.408 1.400 -0.630 2.336 O1 A1ARI 34 A1ARI O2 O3 O 0 1 N N N N N N -14.405 -10.472 -16.003 5.388 0.667 2.132 O2 A1ARI 35 A1ARI O3 O4 O 0 1 N N N N N N -14.854 -15.656 -13.755 2.243 -1.153 -1.123 O3 A1ARI 36 A1ARI O4 O5 O 0 1 N N N N N N -11.409 -19.301 -19.613 -2.610 -2.000 -0.250 O4 A1ARI 37 A1ARI O5 O6 O 0 1 N N N N N N -7.398 -19.647 -16.766 -6.255 0.971 -1.006 O5 A1ARI 38 A1ARI O6 O7 O 0 1 N N N N N N -7.430 -18.450 -18.737 -5.717 0.571 1.110 O6 A1ARI 39 A1ARI HN H1 H 0 1 N N N N N N -9.349 -15.378 -19.070 -0.777 0.074 1.933 HN A1ARI 40 A1ARI H0 H2 H 0 1 N N N N N N -9.626 -17.436 -19.285 -3.354 0.698 1.597 H0 A1ARI 41 A1ARI H111 H3 H 0 0 N N N N N N -8.907 -13.406 -19.350 0.920 2.444 1.907 H111 A1ARI 42 A1ARI H112 H4 H 0 0 N N N N N N -9.699 -12.064 -18.458 0.228 2.857 0.320 H112 A1ARI 43 A1ARI H12 H5 H 0 1 N N N N N N -7.863 -11.634 -17.213 3.101 1.931 0.756 H12 A1ARI 44 A1ARI H13 H6 H 0 1 N N N N N N -11.988 -18.593 -17.742 -2.416 -1.557 1.759 H13 A1ARI 45 A1ARI H142 H7 H 0 0 N N N N N N -13.420 -17.606 -19.517 -5.134 -1.657 0.378 H142 A1ARI 46 A1ARI H141 H8 H 0 0 N N N N N N -12.568 -16.335 -18.577 -4.474 -2.856 1.516 H141 A1ARI 47 A1ARI H143 H9 H 0 0 N N N N N N -11.984 -16.783 -20.215 -4.886 -1.220 2.086 H143 A1ARI 48 A1ARI H162 H10 H 0 0 N N N N N N -5.700 -19.674 -17.985 -7.830 0.527 0.288 H162 A1ARI 49 A1ARI H182 H11 H 0 0 N N N N N N -11.642 -22.243 -18.010 -3.513 -4.384 0.453 H182 A1ARI 50 A1ARI H183 H12 H 0 0 N N N N N N -10.175 -21.460 -18.688 -1.974 -5.006 1.096 H183 A1ARI 51 A1ARI H181 H13 H 0 0 N N N N N N -11.086 -20.664 -17.360 -2.773 -3.624 1.883 H181 A1ARI 52 A1ARI H191 H14 H 0 0 N N N N N N -12.607 -22.341 -20.358 -0.755 -2.210 1.652 H191 A1ARI 53 A1ARI H192 H15 H 0 0 N N N N N N -12.728 -20.827 -21.317 0.104 -3.587 0.921 H192 A1ARI 54 A1ARI H193 H16 H 0 0 N N N N N N -11.118 -21.546 -20.973 0.036 -2.026 0.068 H193 A1ARI 55 A1ARI H2 H17 H 0 1 N N N N N N -9.500 -14.043 -16.531 0.768 0.572 -0.499 H2 A1ARI 56 A1ARI H201 H18 H 0 0 N N N N N N -13.875 -21.399 -18.532 -0.914 -3.166 -1.942 H201 A1ARI 57 A1ARI H203 H19 H 0 0 N N N N N N -13.442 -19.802 -17.834 -0.845 -4.727 -1.089 H203 A1ARI 58 A1ARI H202 H20 H 0 0 N N N N N N -14.087 -19.906 -19.508 -2.381 -4.162 -1.790 H202 A1ARI 59 A1ARI H212 H21 H 0 0 N N N N N N -6.656 -13.376 -19.404 1.971 4.727 0.283 H212 A1ARI 60 A1ARI H211 H22 H 0 0 N N N N N N -7.063 -11.630 -19.520 2.684 4.139 1.804 H211 A1ARI 61 A1ARI H221 H23 H 0 0 N N N N N N -4.575 -12.543 -19.044 4.339 5.431 0.486 H221 A1ARI 62 A1ARI H222 H24 H 0 0 N N N N N N -5.188 -10.977 -18.411 4.833 3.728 0.638 H222 A1ARI 63 A1ARI H231 H25 H 0 0 N N N N N N -3.960 -12.691 -16.812 3.395 4.957 -1.757 H231 A1ARI 64 A1ARI H232 H26 H 0 0 N N N N N N -5.398 -11.778 -16.242 5.123 4.534 -1.689 H232 A1ARI 65 A1ARI H241 H27 H 0 0 N N N N N N -5.484 -14.577 -17.463 3.813 2.749 -2.805 H241 A1ARI 66 A1ARI H242 H28 H 0 0 N N N N N N -5.478 -14.231 -15.700 4.526 2.162 -1.284 H242 A1ARI 67 A1ARI H251 H29 H 0 0 N N N N N N -7.613 -13.334 -15.722 2.157 1.457 -1.487 H251 A1ARI 68 A1ARI H252 H30 H 0 0 N N N N N N -7.754 -14.607 -16.982 1.663 3.160 -1.640 H252 A1ARI 69 A1ARI H26 H31 H 0 1 N N N N N N -5.410 -22.122 -17.889 -8.912 2.748 0.080 H26 A1ARI 70 A1ARI H261 H32 H 0 0 N N N N N N -6.789 -22.257 -16.747 -7.210 2.910 0.576 H261 A1ARI 71 A1ARI H262 H33 H 0 0 N N N N N N -7.072 -21.718 -18.436 -7.681 3.236 -1.110 H262 A1ARI 72 A1ARI H271 H34 H 0 0 N N N N N N -4.281 -20.668 -16.212 -8.397 -0.313 -1.975 H271 A1ARI 73 A1ARI H27 H35 H 0 1 N N N N N N -5.096 -19.178 -15.625 -9.605 0.866 -1.410 H27 A1ARI 74 A1ARI H272 H36 H 0 0 N N N N N N -5.712 -20.792 -15.133 -8.374 1.354 -2.599 H272 A1ARI 75 A1ARI H4 H37 H 0 1 N N N N N N -13.549 -12.694 -17.419 3.368 -1.992 1.824 H4 A1ARI 76 A1ARI H5 H38 H 0 1 N N N N N N -12.581 -10.919 -15.146 3.835 -0.021 3.310 H5 A1ARI 77 A1ARI H H39 H 0 1 N N N N N N -12.552 -10.571 -16.908 5.227 -1.120 3.157 H A1ARI 78 A1ARI H61 H40 H 0 1 N N N N N N -15.061 -12.940 -15.447 5.433 -0.675 0.004 H61 A1ARI 79 A1ARI H62 H41 H 0 1 N N N N N N -13.629 -13.348 -14.443 5.710 -2.168 0.933 H62 A1ARI 80 A1ARI H7 H42 H 0 1 N N N N N N -13.148 -15.274 -15.999 3.747 -3.217 -0.248 H7 A1ARI 81 A1ARI H82 H43 H 0 1 N N N N N N -14.191 -15.147 -18.064 6.328 -2.902 -1.251 H82 A1ARI 82 A1ARI H81 H44 H 0 1 N N N N N N -15.517 -14.108 -17.439 5.052 -3.813 -2.126 H81 A1ARI 83 A1ARI H92 H45 H 0 1 N N N N N N -15.338 -17.106 -17.558 6.023 -0.973 -2.561 H92 A1ARI 84 A1ARI H91 H46 H 0 1 N N N N N N -16.791 -16.053 -17.480 5.416 -2.152 -3.761 H91 A1ARI 85 A1ARI HN1 H47 H 0 1 N N N N N N -11.250 -13.017 -15.515 3.233 0.320 0.044 HN1 A1ARI 86 A1ARI HN2 H48 H 0 1 N N N N N N -16.487 -17.062 -15.191 3.502 -0.608 -3.324 HN2 A1ARI 87 A1ARI HN3 H49 H 0 1 N N N N N N -9.804 -19.031 -16.786 -3.774 0.586 -1.291 HN3 A1ARI 88 A1ARI HO2 H50 H 0 1 N N N N N N -14.314 -9.545 -15.818 5.853 1.160 2.822 HO2 A1ARI 89 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1ARI O3 C10 DOUB N N 1 A1ARI C10 N2 SING N N 2 A1ARI C10 C7 SING N N 3 A1ARI N2 C9 SING N N 4 A1ARI C9 C8 SING N N 5 A1ARI C8 C7 SING N N 6 A1ARI C7 C6 SING N N 7 A1ARI C6 C4 SING N N 8 A1ARI C5 C4 SING N N 9 A1ARI C4 N1 SING N N 10 A1ARI O2 C5 SING N N 11 A1ARI N1 C3 SING N N 12 A1ARI O1 C3 DOUB N N 13 A1ARI C3 C2 SING N N 14 A1ARI C11 C2 SING N N 15 A1ARI C2 N SING N N 16 A1ARI C12 C11 SING N N 17 A1ARI C12 C21 SING N N 18 A1ARI C25 C12 SING N N 19 A1ARI C21 C22 SING N N 20 A1ARI C22 C23 SING N N 21 A1ARI C23 C24 SING N N 22 A1ARI C24 C25 SING N N 23 A1ARI N C1 SING N N 24 A1ARI O C1 DOUB N N 25 A1ARI C1 C SING N N 26 A1ARI C13 C SING N N 27 A1ARI C N3 SING N N 28 A1ARI C14 C13 SING N N 29 A1ARI O4 C13 SING N N 30 A1ARI C17 O4 SING N N 31 A1ARI C18 C17 SING N N 32 A1ARI C19 C17 SING N N 33 A1ARI C20 C17 SING N N 34 A1ARI N3 C15 SING N N 35 A1ARI C15 O6 DOUB N N 36 A1ARI O5 C15 SING N N 37 A1ARI C16 O5 SING N N 38 A1ARI C26 C16 SING N N 39 A1ARI C27 C16 SING N N 40 A1ARI N HN SING N N 41 A1ARI C H0 SING N N 42 A1ARI C11 H111 SING N N 43 A1ARI C11 H112 SING N N 44 A1ARI C12 H12 SING N N 45 A1ARI C13 H13 SING N N 46 A1ARI C14 H142 SING N N 47 A1ARI C14 H141 SING N N 48 A1ARI C14 H143 SING N N 49 A1ARI C16 H162 SING N N 50 A1ARI C18 H182 SING N N 51 A1ARI C18 H183 SING N N 52 A1ARI C18 H181 SING N N 53 A1ARI C19 H191 SING N N 54 A1ARI C19 H192 SING N N 55 A1ARI C19 H193 SING N N 56 A1ARI C2 H2 SING N N 57 A1ARI C20 H201 SING N N 58 A1ARI C20 H203 SING N N 59 A1ARI C20 H202 SING N N 60 A1ARI C21 H212 SING N N 61 A1ARI C21 H211 SING N N 62 A1ARI C22 H221 SING N N 63 A1ARI C22 H222 SING N N 64 A1ARI C23 H231 SING N N 65 A1ARI C23 H232 SING N N 66 A1ARI C24 H241 SING N N 67 A1ARI C24 H242 SING N N 68 A1ARI C25 H251 SING N N 69 A1ARI C25 H252 SING N N 70 A1ARI C26 H26 SING N N 71 A1ARI C26 H261 SING N N 72 A1ARI C26 H262 SING N N 73 A1ARI C27 H271 SING N N 74 A1ARI C27 H27 SING N N 75 A1ARI C27 H272 SING N N 76 A1ARI C4 H4 SING N N 77 A1ARI C5 H5 SING N N 78 A1ARI C5 H SING N N 79 A1ARI C6 H61 SING N N 80 A1ARI C6 H62 SING N N 81 A1ARI C7 H7 SING N N 82 A1ARI C8 H82 SING N N 83 A1ARI C8 H81 SING N N 84 A1ARI C9 H92 SING N N 85 A1ARI C9 H91 SING N N 86 A1ARI N1 HN1 SING N N 87 A1ARI N2 HN2 SING N N 88 A1ARI N3 HN3 SING N N 89 A1ARI O2 HO2 SING N N 90 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1ARI SMILES ACDLabs 12.01 "CC(C)(C)OC(C)C(NC(=O)OC(C)C)C(=O)NC(CC1CCCCC1)C(=O)NC(CC1CCNC1=O)CO" A1ARI InChI InChI 1.06 "InChI=1S/C28H50N4O7/c1-17(2)38-27(37)32-23(18(3)39-28(4,5)6)26(36)31-22(14-19-10-8-7-9-11-19)25(35)30-21(16-33)15-20-12-13-29-24(20)34/h17-23,33H,7-16H2,1-6H3,(H,29,34)(H,30,35)(H,31,36)(H,32,37)/t18-,20+,21-,22+,23?/m1/s1" A1ARI InChIKey InChI 1.06 UBWPCMLMIZPHFF-PDTZRLOFSA-N A1ARI SMILES_CANONICAL CACTVS 3.385 "CC(C)OC(=O)N[C@@H]([C@@H](C)OC(C)(C)C)C(=O)N[C@@H](CC1CCCCC1)C(=O)N[C@H](CO)C[C@@H]2CCNC2=O" A1ARI SMILES CACTVS 3.385 "CC(C)OC(=O)N[CH]([CH](C)OC(C)(C)C)C(=O)N[CH](CC1CCCCC1)C(=O)N[CH](CO)C[CH]2CCNC2=O" A1ARI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]([C@@H](C(=O)N[C@@H](CC1CCCCC1)C(=O)N[C@@H](C[C@@H]2CCNC2=O)CO)NC(=O)OC(C)C)OC(C)(C)C" A1ARI SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)OC(=O)NC(C(C)OC(C)(C)C)C(=O)NC(CC1CCCCC1)C(=O)NC(CC2CCNC2=O)CO" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1ARI "SYSTEMATIC NAME" ACDLabs 12.01 "O-tert-butyl-N-{[(propan-2-yl)oxy]carbonyl}-L-threonyl-3-cyclohexyl-N-{(2R)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-alaninamide" A1ARI "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "propan-2-yl ~{N}-[(2~{S},3~{R})-1-[[(2~{S})-3-cyclohexyl-1-oxidanylidene-1-[[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]propan-2-yl]amino]-3-[(2-methylpropan-2-yl)oxy]-1-oxidanylidene-butan-2-yl]carbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1ARI "Create component" 2024-05-13 RCSB A1ARI "Modify PCM" 2024-09-27 PDBE A1ARI "Initial release" 2025-05-14 RCSB # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1ARI _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C5 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #