data_A1ARV # _chem_comp.id A1ARV _chem_comp.name "(1H-indol-4-yl)methanol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H9 N O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-05-14 _chem_comp.pdbx_modified_date 2025-05-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 179.239 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1ARV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9BQZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1ARV C1 C1 C 0 1 Y N N N N N -9.013 -12.260 -17.430 0.725 -0.309 -0.221 C1 A1ARV 1 A1ARV C10 C2 C 0 1 N N R N N N -10.038 -10.592 -15.920 -1.755 -0.131 -0.606 C10 A1ARV 2 A1ARV C2 C3 C 0 1 Y N N N N N -8.883 -11.446 -16.316 -0.425 0.482 -0.254 C2 A1ARV 3 A1ARV C3 C4 C 0 1 Y N N N N N -7.696 -11.464 -15.582 -0.339 1.816 0.035 C3 A1ARV 4 A1ARV C4 C5 C 0 1 Y N N N N N -6.635 -12.289 -15.963 0.882 2.389 0.361 C4 A1ARV 5 A1ARV C5 C6 C 0 1 Y N N N N N -6.762 -13.103 -17.088 2.029 1.626 0.399 C5 A1ARV 6 A1ARV C6 C7 C 0 1 Y N N N N N -7.957 -13.076 -17.808 1.965 0.268 0.109 C6 A1ARV 7 A1ARV C8 C8 C 0 1 Y N N N N N -9.662 -13.339 -19.238 2.306 -1.919 -0.279 C8 A1ARV 8 A1ARV C9 C9 C 0 1 Y N N N N N -10.122 -12.410 -18.326 0.990 -1.730 -0.461 C9 A1ARV 9 A1ARV N7 N1 N 0 1 Y N N N N N -8.387 -13.720 -18.914 2.905 -0.737 0.064 N7 A1ARV 10 A1ARV O14 O1 O 0 1 N N N N N N -10.130 -10.711 -14.499 -2.691 0.905 -0.914 O14 A1ARV 11 A1ARV H1 H1 H 0 1 N N N N N N -10.018 -9.568 -16.321 -1.637 -0.783 -1.472 H1 A1ARV 12 A1ARV H3 H3 H 0 1 N N N N N N -7.597 -10.834 -14.711 -1.228 2.428 0.009 H3 A1ARV 13 A1ARV H4 H4 H 0 1 N N N N N N -5.720 -12.296 -15.389 0.934 3.444 0.586 H4 A1ARV 14 A1ARV H5 H5 H 0 1 N N N N N N -5.949 -13.744 -17.397 2.975 2.082 0.653 H5 A1ARV 15 A1ARV H8 H6 H 0 1 N N N N N N -10.224 -13.710 -20.082 2.817 -2.865 -0.385 H8 A1ARV 16 A1ARV H9 H7 H 0 1 N N N N N N -11.082 -11.917 -18.295 0.264 -2.481 -0.733 H9 A1ARV 17 A1ARV HN7 H8 H 0 1 N N N N N N -7.847 -14.386 -19.428 3.851 -0.624 0.245 HN7 A1ARV 18 A1ARV HO14 H9 H 0 0 N N N N N N -10.855 -10.184 -14.183 -2.845 1.524 -0.187 HO14 A1ARV 19 A1ARV S1 S1 S 0 1 N Y N N N N -11.791 -11.203 -15.837 -2.366 -1.099 0.801 S1 A1ARV 20 A1ARV H2 H2 H 0 1 N Y N N N N -12.431 -10.137 -15.457 -3.539 -1.579 0.351 H2 A1ARV 21 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1ARV C1 C2 DOUB Y N 1 A1ARV C1 C6 SING Y N 2 A1ARV C1 C9 SING Y N 3 A1ARV C3 C2 SING Y N 4 A1ARV C2 C10 SING N N 5 A1ARV C4 C3 DOUB Y N 6 A1ARV C5 C4 SING Y N 7 A1ARV C6 C5 DOUB Y N 8 A1ARV N7 C6 SING Y N 9 A1ARV C8 N7 SING Y N 10 A1ARV C9 C8 DOUB Y N 11 A1ARV C10 O14 SING N N 12 A1ARV C10 H1 SING N N 13 A1ARV C3 H3 SING N N 14 A1ARV C4 H4 SING N N 15 A1ARV C5 H5 SING N N 16 A1ARV C8 H8 SING N N 17 A1ARV C9 H9 SING N N 18 A1ARV N7 HN7 SING N N 19 A1ARV O14 HO14 SING N N 20 A1ARV C10 S1 SING N N 21 A1ARV S1 H2 SING N N 22 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1ARV SMILES ACDLabs 12.01 "OC(S)c1cccc2[NH]ccc12" A1ARV InChI InChI 1.06 "InChI=1S/C9H9NOS/c11-9(12)7-2-1-3-8-6(7)4-5-10-8/h1-5,9-12H/t9-/m1/s1" A1ARV InChIKey InChI 1.06 IKCBAJPNSFJNFK-SECBINFHSA-N A1ARV SMILES_CANONICAL CACTVS 3.385 "O[C@H](S)c1cccc2[nH]ccc12" A1ARV SMILES CACTVS 3.385 "O[CH](S)c1cccc2[nH]ccc12" A1ARV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c2cc[nH]c2c1)[C@H](O)S" A1ARV SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c2cc[nH]c2c1)C(O)S" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1ARV "SYSTEMATIC NAME" ACDLabs 12.01 "(R)-(1H-indol-4-yl)(sulfanyl)methanol" A1ARV "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(~{R})-1~{H}-indol-4-yl(sulfanyl)methanol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1ARV "Create component" 2024-05-14 RCSB A1ARV "Modify PCM" 2024-09-27 PDBE A1ARV "Initial release" 2025-05-14 RCSB # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1ARV _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C10 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #