data_A1AUG # _chem_comp.id A1AUG _chem_comp.name 5-oxo-L-norvaline _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C5 H9 N O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "L-glutamate gamma-aldehyde" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-06-05 _chem_comp.pdbx_modified_date 2025-05-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 131.130 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AUG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9C36 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AUG N N1 N 0 1 N N N N N N -20.601 73.991 102.224 -0.861 1.802 -0.321 N A1AUG 1 A1AUG CA C1 C 0 1 N N S N N N -21.482 74.887 101.531 -0.736 0.349 -0.494 CA A1AUG 2 A1AUG C C2 C 0 1 N N N N N N -21.873 74.369 100.142 -1.986 -0.326 0.010 C A1AUG 3 A1AUG CB C3 C 0 1 N N N N N N -20.741 76.197 101.332 0.472 -0.157 0.297 CB A1AUG 4 A1AUG CG C4 C 0 1 N N N N N N -20.866 77.024 102.591 1.753 0.432 -0.295 CG A1AUG 5 A1AUG CD C5 C 0 1 N N N N N N -21.685 78.201 102.120 2.943 -0.066 0.484 CD A1AUG 6 A1AUG OE1 O1 O 0 1 N N N N N N -21.242 79.210 101.970 3.849 -0.622 -0.088 OE1 A1AUG 7 A1AUG O O2 O 0 1 N N N N N N -22.894 74.822 99.582 -2.285 -1.571 -0.393 O A1AUG 8 A1AUG OXT O3 O 0 1 N N N N N N -21.182 73.508 99.564 -2.718 0.253 0.777 OXT A1AUG 9 A1AUG H2 H1 H 0 1 N N N N N N -20.376 74.372 103.121 -1.612 2.170 -0.885 H2 A1AUG 10 A1AUG H H2 H 0 1 N N N N N N -21.051 73.106 102.341 -0.988 2.041 0.651 H A1AUG 11 A1AUG HA H4 H 0 1 N N N N N N -22.393 75.068 102.120 -0.600 0.119 -1.551 HA A1AUG 12 A1AUG HB2 H5 H 0 1 N N N N N N -19.680 75.994 101.127 0.378 0.150 1.339 HB2 A1AUG 13 A1AUG HB3 H6 H 0 1 N N N N N N -21.180 76.745 100.485 0.513 -1.245 0.241 HB3 A1AUG 14 A1AUG HG3 H7 H 0 1 N N N N N N -21.387 76.467 103.384 1.847 0.125 -1.337 HG3 A1AUG 15 A1AUG HG2 H8 H 0 1 N N N N N N -19.880 77.345 102.957 1.712 1.520 -0.239 HG2 A1AUG 16 A1AUG HD H9 H 0 1 N N N N N N -22.737 78.059 101.922 2.984 0.074 1.554 HD A1AUG 17 A1AUG H3 H10 H 0 1 N N N N N N -22.999 74.410 98.733 -3.097 -1.963 -0.043 H3 A1AUG 18 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AUG OXT C DOUB N N 1 A1AUG O C SING N N 2 A1AUG C CA SING N N 3 A1AUG CB CA SING N N 4 A1AUG CB CG SING N N 5 A1AUG CA N SING N N 6 A1AUG OE1 CD DOUB N N 7 A1AUG CD CG SING N N 8 A1AUG N H2 SING N N 9 A1AUG N H SING N N 10 A1AUG CA HA SING N N 11 A1AUG CB HB2 SING N N 12 A1AUG CB HB3 SING N N 13 A1AUG CG HG3 SING N N 14 A1AUG CG HG2 SING N N 15 A1AUG CD HD SING N N 16 A1AUG O H3 SING N N 17 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AUG SMILES ACDLabs 12.01 "O=CCCC(N)C(=O)O" A1AUG InChI InChI 1.06 "InChI=1S/C5H9NO3/c6-4(5(8)9)2-1-3-7/h3-4H,1-2,6H2,(H,8,9)/t4-/m0/s1" A1AUG InChIKey InChI 1.06 KABXUUFDPUOJMW-BYPYZUCNSA-N A1AUG SMILES_CANONICAL CACTVS 3.385 "N[C@@H](CCC=O)C(O)=O" A1AUG SMILES CACTVS 3.385 "N[CH](CCC=O)C(O)=O" A1AUG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C(C[C@@H](C(=O)O)N)C=O" A1AUG SMILES "OpenEye OEToolkits" 2.0.7 "C(CC(C(=O)O)N)C=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AUG "SYSTEMATIC NAME" ACDLabs 12.01 5-oxo-L-norvaline A1AUG "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-2-azanyl-5-oxidanylidene-pentanoic acid" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1AUG _pdbx_chem_comp_synonyms.name "L-glutamate gamma-aldehyde" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AUG "Create component" 2024-06-05 RCSB A1AUG "Modify formula" 2024-07-18 PDBE A1AUG "Modify PCM" 2024-09-27 PDBE A1AUG "Initial release" 2025-06-04 RCSB # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1AUG _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom CD _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #