data_A1AV2 # _chem_comp.id A1AV2 _chem_comp.name "(3P)-5-[(1R)-1-(3,5-dichloropyridin-4-yl)ethoxy]-3-{6-[6-(methanesulfonyl)-2,6-diazaspiro[3.3]heptan-2-yl]pyridin-3-yl}-1H-indazole" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H24 Cl2 N6 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-06-25 _chem_comp.pdbx_modified_date 2024-09-20 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 559.467 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AV2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9CD5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AV2 C1 C1 C 0 1 N N N N N N -18.731 6.428 13.097 -5.895 -0.336 1.686 C1 A1AV2 1 A1AV2 C2 C2 C 0 1 N N R N N N -18.488 5.180 12.274 -5.179 -0.594 0.359 C2 A1AV2 2 A1AV2 C3 C3 C 0 1 Y N N N N N -19.780 4.433 12.031 -5.207 -2.069 0.052 C3 A1AV2 3 A1AV2 C4 C4 C 0 1 Y N N N N N -20.391 3.681 13.034 -6.060 -2.577 -0.917 C4 A1AV2 4 A1AV2 C5 C5 C 0 1 Y N N N N N -21.565 3.006 12.771 -6.058 -3.937 -1.172 C5 A1AV2 5 A1AV2 C6 C6 C 0 1 Y N N N N N -21.596 3.744 10.611 -4.435 -4.299 0.423 C6 A1AV2 6 A1AV2 C10 C7 C 0 1 Y N N N N N -15.261 1.570 12.817 -4.429 3.359 -0.246 C10 A1AV2 7 A1AV2 C13 C8 C 0 1 Y N N N N N -15.568 1.075 11.545 -3.129 3.855 -0.284 C13 A1AV2 8 A1AV2 CL1 CL1 CL 0 0 N N N N N N -19.700 3.564 14.626 -7.117 -1.519 -1.800 CL1 A1AV2 9 A1AV2 N1 N1 N 0 1 Y N N N N N -22.165 3.034 11.583 -5.258 -4.746 -0.505 N1 A1AV2 10 A1AV2 C7 C9 C 0 1 Y N N N N N -20.424 4.449 10.792 -4.377 -2.951 0.728 C7 A1AV2 11 A1AV2 CL2 CL2 CL 0 0 N N N N N N -19.783 5.340 9.442 -3.284 -2.372 1.946 CL2 A1AV2 12 A1AV2 O1 O1 O 0 1 N N N N N N -17.506 4.421 13.022 -3.823 -0.153 0.456 O1 A1AV2 13 A1AV2 C8 C10 C 0 1 Y N N N N N -16.906 3.320 12.458 -3.583 1.163 0.213 C8 A1AV2 14 A1AV2 C9 C11 C 0 1 Y N N N N N -15.939 2.686 13.257 -4.649 2.034 -0.001 C9 A1AV2 15 A1AV2 C11 C12 C 0 1 Y N N N N N -17.211 2.825 11.191 -2.284 1.627 0.170 C11 A1AV2 16 A1AV2 C12 C13 C 0 1 Y N N N N N -16.536 1.687 10.730 -2.046 2.982 -0.074 C12 A1AV2 17 A1AV2 N2 N2 N 0 1 Y N N N N N -15.093 0.010 10.833 -2.598 5.104 -0.497 N2 A1AV2 18 A1AV2 N3 N3 N 0 1 Y N N N N N -15.701 -0.084 9.625 -1.203 5.031 -0.424 N3 A1AV2 19 A1AV2 C14 C14 C 0 1 Y N N N N N -16.574 0.915 9.526 -0.831 3.797 -0.186 C14 A1AV2 20 A1AV2 C15 C15 C 0 1 Y N N N N N -17.389 1.056 8.303 0.563 3.313 -0.050 C15 A1AV2 21 A1AV2 C16 C16 C 0 1 Y N N N N N -16.961 0.562 7.076 1.587 3.872 -0.825 C16 A1AV2 22 A1AV2 C17 C17 C 0 1 Y N N N N N -17.747 0.710 5.949 2.870 3.389 -0.663 C17 A1AV2 23 A1AV2 C18 C18 C 0 1 Y N N N N N -18.625 1.691 8.333 0.874 2.301 0.855 C18 A1AV2 24 A1AV2 N4 N4 N 0 1 Y N N N N N -19.403 1.838 7.238 2.113 1.868 0.979 N4 A1AV2 25 A1AV2 C19 C19 C 0 1 Y N N N N N -18.968 1.364 6.061 3.103 2.371 0.257 C19 A1AV2 26 A1AV2 N5 N5 N 0 1 N N N N N N -19.824 1.537 4.948 4.392 1.879 0.425 N5 A1AV2 27 A1AV2 C20 C20 C 0 1 N N N N N N -19.567 1.418 3.502 4.422 0.809 1.443 C20 A1AV2 28 A1AV2 C21 C21 C 0 1 N N N N N N -21.275 1.296 4.862 4.705 0.855 -0.593 C21 A1AV2 29 A1AV2 C22 C22 C 0 1 N N N N N N -21.093 1.145 3.327 5.359 0.045 0.517 C22 A1AV2 30 A1AV2 C23 C23 C 0 1 N N N N N N -21.969 1.996 2.379 6.872 0.026 0.727 C23 A1AV2 31 A1AV2 C24 C24 C 0 1 N N N N N N -21.550 -0.138 2.591 5.407 -1.481 0.489 C24 A1AV2 32 A1AV2 N6 N6 N 0 1 N N N N N N -22.372 0.730 1.690 6.827 -1.317 0.111 N6 A1AV2 33 A1AV2 S1 S1 S 0 1 N N N N N N -22.323 0.612 0.065 7.929 -2.262 -0.685 S1 A1AV2 34 A1AV2 C25 C25 C 0 1 N N N N N N -20.714 1.055 -0.488 8.720 -3.237 0.625 C25 A1AV2 35 A1AV2 O2 O2 O 0 1 N N N N N N -22.515 -0.765 -0.284 7.137 -3.097 -1.519 O2 A1AV2 36 A1AV2 O3 O3 O 0 1 N N N N N N -23.237 1.592 -0.442 8.850 -1.334 -1.241 O3 A1AV2 37 A1AV2 H2 H1 H 0 1 N N N N N N -17.778 6.952 13.259 -5.875 0.731 1.909 H2 A1AV2 38 A1AV2 H1 H2 H 0 1 N N N N N N -19.427 7.090 12.561 -6.930 -0.672 1.613 H1 A1AV2 39 A1AV2 H3 H3 H 0 1 N N N N N N -19.165 6.148 14.068 -5.391 -0.882 2.484 H3 A1AV2 40 A1AV2 H4 H4 H 0 1 N N N N N N -18.063 5.475 11.303 -5.683 -0.047 -0.438 H4 A1AV2 41 A1AV2 H5 H5 H 0 1 N N N N N N -22.017 2.429 13.564 -6.719 -4.340 -1.924 H5 A1AV2 42 A1AV2 H6 H6 H 0 1 N N N N N N -22.071 3.769 9.641 -3.792 -4.993 0.945 H6 A1AV2 43 A1AV2 H8 H7 H 0 1 N N N N N N -14.515 1.092 13.435 -5.265 4.024 -0.406 H8 A1AV2 44 A1AV2 H7 H8 H 0 1 N N N N N N -15.722 3.082 14.238 -5.661 1.657 0.026 H7 A1AV2 45 A1AV2 H9 H9 H 0 1 N N N N N N -17.954 3.310 10.576 -1.459 0.949 0.328 H9 A1AV2 46 A1AV2 H10 H10 H 0 1 N N N N N N -14.388 -0.619 11.161 -3.110 5.909 -0.671 H10 A1AV2 47 A1AV2 H11 H11 H 0 1 N N N N N N -16.008 0.059 7.003 1.378 4.661 -1.532 H11 A1AV2 48 A1AV2 H12 H12 H 0 1 N N N N N N -17.417 0.323 4.996 3.684 3.796 -1.245 H12 A1AV2 49 A1AV2 H13 H13 H 0 1 N N N N N N -18.980 2.085 9.274 0.093 1.867 1.460 H13 A1AV2 50 A1AV2 H14 H14 H 0 1 N N N N N N -19.207 2.340 3.022 4.888 1.113 2.380 H14 A1AV2 51 A1AV2 H15 H15 H 0 1 N N N N N N -18.915 0.579 3.219 3.459 0.319 1.589 H15 A1AV2 52 A1AV2 H17 H16 H 0 1 N N N N N N -21.620 0.386 5.374 3.821 0.379 -1.017 H17 A1AV2 53 A1AV2 H16 H17 H 0 1 N N N N N N -21.900 2.148 5.168 5.407 1.198 -1.353 H16 A1AV2 54 A1AV2 H18 H18 H 0 1 N N N N N N -22.794 2.528 2.875 7.408 0.766 0.132 H18 A1AV2 55 A1AV2 H19 H19 H 0 1 N N N N N N -21.407 2.700 1.748 7.171 0.021 1.775 H19 A1AV2 56 A1AV2 H21 H20 H 0 1 N N N N N N -20.742 -0.686 2.084 5.262 -1.944 1.465 H21 A1AV2 57 A1AV2 H20 H21 H 0 1 N N N N N N -22.134 -0.836 3.210 4.792 -1.927 -0.292 H20 A1AV2 58 A1AV2 H22 H22 H 0 1 N N N N N N -20.669 0.979 -1.584 7.967 -3.834 1.138 H22 A1AV2 59 A1AV2 H23 H23 H 0 1 N N N N N N -20.493 2.088 -0.183 9.470 -3.895 0.185 H23 A1AV2 60 A1AV2 H24 H24 H 0 1 N N N N N N -19.973 0.375 -0.043 9.200 -2.566 1.337 H24 A1AV2 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AV2 C1 C2 SING N N 1 A1AV2 C2 C3 SING N N 2 A1AV2 C2 O1 SING N N 3 A1AV2 C3 C4 DOUB Y N 4 A1AV2 C3 C7 SING Y N 5 A1AV2 C4 CL1 SING N N 6 A1AV2 C4 C5 SING Y N 7 A1AV2 C5 N1 DOUB Y N 8 A1AV2 N1 C6 SING Y N 9 A1AV2 C6 C7 DOUB Y N 10 A1AV2 C7 CL2 SING N N 11 A1AV2 O1 C8 SING N N 12 A1AV2 C8 C9 DOUB Y N 13 A1AV2 C8 C11 SING Y N 14 A1AV2 C9 C10 SING Y N 15 A1AV2 C10 C13 DOUB Y N 16 A1AV2 C11 C12 DOUB Y N 17 A1AV2 C12 C13 SING Y N 18 A1AV2 C12 C14 SING Y N 19 A1AV2 C13 N2 SING Y N 20 A1AV2 N2 N3 SING Y N 21 A1AV2 N3 C14 DOUB Y N 22 A1AV2 C14 C15 SING N N 23 A1AV2 C15 C16 DOUB Y N 24 A1AV2 C15 C18 SING Y N 25 A1AV2 C16 C17 SING Y N 26 A1AV2 C17 C19 DOUB Y N 27 A1AV2 C18 N4 DOUB Y N 28 A1AV2 N4 C19 SING Y N 29 A1AV2 C19 N5 SING N N 30 A1AV2 N5 C20 SING N N 31 A1AV2 N5 C21 SING N N 32 A1AV2 C20 C22 SING N N 33 A1AV2 C21 C22 SING N N 34 A1AV2 C22 C23 SING N N 35 A1AV2 C22 C24 SING N N 36 A1AV2 C23 N6 SING N N 37 A1AV2 C24 N6 SING N N 38 A1AV2 N6 S1 SING N N 39 A1AV2 S1 C25 SING N N 40 A1AV2 S1 O2 DOUB N N 41 A1AV2 S1 O3 DOUB N N 42 A1AV2 C1 H2 SING N N 43 A1AV2 C1 H1 SING N N 44 A1AV2 C1 H3 SING N N 45 A1AV2 C2 H4 SING N N 46 A1AV2 C5 H5 SING N N 47 A1AV2 C6 H6 SING N N 48 A1AV2 C10 H8 SING N N 49 A1AV2 C9 H7 SING N N 50 A1AV2 C11 H9 SING N N 51 A1AV2 N2 H10 SING N N 52 A1AV2 C16 H11 SING N N 53 A1AV2 C17 H12 SING N N 54 A1AV2 C18 H13 SING N N 55 A1AV2 C20 H14 SING N N 56 A1AV2 C20 H15 SING N N 57 A1AV2 C21 H17 SING N N 58 A1AV2 C21 H16 SING N N 59 A1AV2 C23 H18 SING N N 60 A1AV2 C23 H19 SING N N 61 A1AV2 C24 H21 SING N N 62 A1AV2 C24 H20 SING N N 63 A1AV2 C25 H22 SING N N 64 A1AV2 C25 H23 SING N N 65 A1AV2 C25 H24 SING N N 66 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AV2 SMILES ACDLabs 12.01 "CS(=O)(=O)N1CC2(CN(C2)c2ccc(cn2)c2n[NH]c3ccc(cc32)OC(C)c2c(Cl)cncc2Cl)C1" A1AV2 InChI InChI 1.06 "InChI=1S/C25H24Cl2N6O3S/c1-15(23-19(26)9-28-10-20(23)27)36-17-4-5-21-18(7-17)24(31-30-21)16-3-6-22(29-8-16)32-11-25(12-32)13-33(14-25)37(2,34)35/h3-10,15H,11-14H2,1-2H3,(H,30,31)/t15-/m1/s1" A1AV2 InChIKey InChI 1.06 JOAFWIHZEBKYQK-OAHLLOKOSA-N A1AV2 SMILES_CANONICAL CACTVS 3.385 "C[C@@H](Oc1ccc2[nH]nc(c3ccc(nc3)N4CC5(C4)CN(C5)[S](C)(=O)=O)c2c1)c6c(Cl)cncc6Cl" A1AV2 SMILES CACTVS 3.385 "C[CH](Oc1ccc2[nH]nc(c3ccc(nc3)N4CC5(C4)CN(C5)[S](C)(=O)=O)c2c1)c6c(Cl)cncc6Cl" A1AV2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](c1c(cncc1Cl)Cl)Oc2ccc3c(c2)c(n[nH]3)c4ccc(nc4)N5CC6(C5)CN(C6)S(=O)(=O)C" A1AV2 SMILES "OpenEye OEToolkits" 2.0.7 "CC(c1c(cncc1Cl)Cl)Oc2ccc3c(c2)c(n[nH]3)c4ccc(nc4)N5CC6(C5)CN(C6)S(=O)(=O)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AV2 "SYSTEMATIC NAME" ACDLabs 12.01 "(3P)-5-[(1R)-1-(3,5-dichloropyridin-4-yl)ethoxy]-3-{6-[6-(methanesulfonyl)-2,6-diazaspiro[3.3]heptan-2-yl]pyridin-3-yl}-1H-indazole" A1AV2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-[(1~{R})-1-[3,5-bis(chloranyl)pyridin-4-yl]ethoxy]-3-[6-(2-methylsulfonyl-2,6-diazaspiro[3.3]heptan-6-yl)pyridin-3-yl]-1~{H}-indazole" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AV2 "Create component" 2024-06-25 RCSB A1AV2 "Initial release" 2024-09-25 RCSB #