data_A1AWC
#
_chem_comp.id A1AWC
_chem_comp.name "N-{6-[(4bS,8R,8aS,15bR)-1,8a-dihydroxy-5,6,8,8a,9,15b-hexahydro-7H-4,8-methano[1]benzofuro[3,2-c]pyrido[3,4-b]acridin-7-yl]hexyl}guanidine"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C30 H35 N5 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2024-07-01
_chem_comp.pdbx_modified_date 2025-03-28
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 513.631
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code A1AWC
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 9CGJ
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
_chem_comp.pdbx_pcm ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
A1AWC C21 C1 C 0 1 Y N N N N N 128.642 118.073 93.489 3.856 0.526 0.674 C21 A1AWC 1
A1AWC C12 C2 C 0 1 N N N N N N 128.693 118.797 97.237 0.247 -0.223 1.647 C12 A1AWC 2
A1AWC C13 C3 C 0 1 N N N N N N 129.134 119.911 98.174 -1.022 -0.550 0.848 C13 A1AWC 3
A1AWC C14 C4 C 0 1 Y N N N N N 127.677 120.266 95.448 1.571 -1.543 0.002 C14 A1AWC 4
A1AWC C15 C5 C 0 1 Y N N N N N 127.811 121.625 95.581 0.916 -1.916 -1.160 C15 A1AWC 5
A1AWC C16 C6 C 0 1 Y N N N N N 126.707 122.400 95.209 1.173 -3.199 -1.611 C16 A1AWC 6
A1AWC C17 C7 C 0 1 Y N N N N N 125.538 121.803 94.741 2.089 -4.001 -0.950 C17 A1AWC 7
A1AWC C18 C8 C 0 1 Y N N N N N 125.430 120.408 94.621 2.828 -3.564 0.192 C18 A1AWC 8
A1AWC C19 C9 C 0 1 Y N N N N N 126.543 119.661 94.972 2.549 -2.274 0.660 C19 A1AWC 9
A1AWC C1 C10 C 0 1 N N N N N N 131.351 123.833 104.468 -11.061 0.613 0.386 C1 A1AWC 10
A1AWC N1 N1 N 0 1 N N N N N N 131.580 125.102 104.754 -11.065 0.976 1.638 N1 A1AWC 11
A1AWC C2 C11 C 0 1 N N N N N N 133.259 123.782 102.914 -8.602 0.627 0.437 C2 A1AWC 12
A1AWC C3 C12 C 0 1 N N N N N N 133.071 124.139 101.454 -7.436 0.351 -0.514 C3 A1AWC 13
A1AWC C4 C13 C 0 1 N N N N N N 132.706 122.959 100.586 -6.113 0.566 0.225 C4 A1AWC 14
A1AWC C5 C14 C 0 1 N N N N N N 132.590 123.313 99.128 -4.947 0.290 -0.726 C5 A1AWC 15
A1AWC C6 C15 C 0 1 N N N N N N 132.182 122.153 98.258 -3.624 0.504 0.012 C6 A1AWC 16
A1AWC C7 C16 C 0 1 N N N N N N 130.823 121.590 98.634 -2.458 0.228 -0.939 C7 A1AWC 17
A1AWC C10 C17 C 0 1 N N S N N N 130.084 119.790 95.411 1.227 0.812 -0.420 C10 A1AWC 18
A1AWC C11 C18 C 0 1 N N S N N N 128.703 119.228 95.763 1.441 -0.211 0.700 C11 A1AWC 19
A1AWC C20 C19 C 0 1 N N R N N N 128.134 118.076 94.906 2.757 -0.139 1.454 C20 A1AWC 20
A1AWC C8 C20 C 0 1 N N R N N N 130.244 121.052 96.304 -0.056 0.411 -1.162 C8 A1AWC 21
A1AWC C9 C21 C 0 1 N N N N N N 129.146 122.146 96.069 0.027 -0.938 -1.857 C9 A1AWC 22
A1AWC N2 N2 N 0 1 N N N N N N 132.065 123.223 103.530 -9.868 0.422 -0.270 N2 A1AWC 23
A1AWC N3 N3 N 0 1 N N N N N N 130.358 120.565 97.692 -1.188 0.434 -0.229 N3 A1AWC 24
A1AWC N4 N4 N 0 1 Y N N N N N 128.122 117.135 92.708 5.004 0.719 1.300 N4 A1AWC 25
A1AWC N5 N5 N 0 1 N N N N N N 130.421 123.169 105.130 -12.249 0.420 -0.278 N5 A1AWC 26
A1AWC O1 O1 O 0 1 N N N N N N 131.092 118.822 95.730 1.104 2.129 0.120 O1 A1AWC 27
A1AWC O2 O2 O 0 1 N N N N N N 124.296 119.788 94.161 3.744 -4.368 0.797 O2 A1AWC 28
A1AWC C22 C22 C 0 1 Y N N N N N 128.519 117.038 91.402 6.048 1.300 0.710 C22 A1AWC 29
A1AWC C23 C23 C 0 1 Y N N N N N 127.959 116.043 90.574 7.261 1.491 1.396 C23 A1AWC 30
A1AWC C24 C24 C 0 1 Y N N N N N 128.345 115.933 89.272 8.308 2.088 0.764 C24 A1AWC 31
A1AWC C25 C25 C 0 1 Y N N N N N 129.300 116.805 88.736 8.200 2.517 -0.557 C25 A1AWC 32
A1AWC C26 C26 C 0 1 Y N N N N N 129.861 117.778 89.504 7.042 2.350 -1.254 C26 A1AWC 33
A1AWC C27 C27 C 0 1 Y N N N N N 129.479 117.913 90.861 5.943 1.736 -0.634 C27 A1AWC 34
A1AWC C28 C28 C 0 1 Y N N N N N 130.023 118.898 91.704 4.728 1.537 -1.312 C28 A1AWC 35
A1AWC C29 C29 C 0 1 Y N N N N N 129.621 118.989 93.019 3.695 0.934 -0.645 C29 A1AWC 36
A1AWC C30 C30 C 0 1 N N N N N N 130.220 120.060 93.908 2.405 0.714 -1.392 C30 A1AWC 37
A1AWC O3 O3 O 0 1 N N N N N N 126.691 118.294 94.941 3.102 -1.538 1.646 O3 A1AWC 38
A1AWC H1 H1 H 0 1 N N N N N N 127.671 118.492 97.508 0.139 0.754 2.118 H1 A1AWC 39
A1AWC H2 H2 H 0 1 N N N N N N 129.375 117.943 97.359 0.399 -0.983 2.414 H2 A1AWC 40
A1AWC H3 H3 H 0 1 N N N N N N 128.331 120.660 98.242 -0.933 -1.547 0.418 H3 A1AWC 41
A1AWC H4 H4 H 0 1 N N N N N N 129.324 119.486 99.171 -1.888 -0.514 1.509 H4 A1AWC 42
A1AWC H5 H5 H 0 1 N N N N N N 126.762 123.476 95.286 0.658 -3.576 -2.482 H5 A1AWC 43
A1AWC H6 H6 H 0 1 N N N N N N 124.699 122.425 94.465 2.259 -5.001 -1.321 H6 A1AWC 44
A1AWC H7 H7 H 0 1 N N N N N N 130.985 125.434 105.485 -11.907 1.111 2.101 H7 A1AWC 45
A1AWC H8 H8 H 0 1 N N N N N N 134.070 123.043 102.991 -8.546 -0.052 1.287 H8 A1AWC 46
A1AWC H9 H9 H 0 1 N N N N N N 133.540 124.693 103.462 -8.546 1.657 0.791 H9 A1AWC 47
A1AWC H10 H10 H 0 1 N N N N N N 134.010 124.570 101.078 -7.491 -0.678 -0.868 H10 A1AWC 48
A1AWC H11 H11 H 0 1 N N N N N N 132.268 124.887 101.379 -7.491 1.031 -1.364 H11 A1AWC 49
A1AWC H12 H12 H 0 1 N N N N N N 131.740 122.559 100.927 -6.057 1.595 0.578 H12 A1AWC 50
A1AWC H13 H13 H 0 1 N N N N N N 133.482 122.188 100.698 -6.057 -0.114 1.075 H13 A1AWC 51
A1AWC H14 H14 H 0 1 N N N N N N 133.566 123.682 98.781 -5.003 -0.740 -1.080 H14 A1AWC 52
A1AWC H15 H15 H 0 1 N N N N N N 131.838 124.109 99.022 -5.003 0.970 -1.577 H15 A1AWC 53
A1AWC H16 H16 H 0 1 N N N N N N 132.933 121.356 98.359 -3.569 1.534 0.366 H16 A1AWC 54
A1AWC H17 H17 H 0 1 N N N N N N 132.145 122.493 97.212 -3.569 -0.175 0.863 H17 A1AWC 55
A1AWC H18 H18 H 0 1 N N N N N N 130.093 122.412 98.649 -2.514 -0.801 -1.293 H18 A1AWC 56
A1AWC H19 H19 H 0 1 N N N N N N 130.892 121.142 99.636 -2.514 0.908 -1.789 H19 A1AWC 57
A1AWC H20 H20 H 0 1 N N N N N N 128.383 117.118 95.386 2.626 0.355 2.417 H20 A1AWC 58
A1AWC H21 H21 H 0 1 N N N N N N 131.206 121.511 96.033 -0.243 1.159 -1.932 H21 A1AWC 59
A1AWC H22 H22 H 0 1 N N N N N N 129.528 122.856 95.321 0.406 -0.781 -2.867 H22 A1AWC 60
A1AWC H23 H23 H 0 1 N N N N N N 128.979 122.671 97.021 -0.974 -1.363 -1.926 H23 A1AWC 61
A1AWC H24 H24 H 0 1 N N N N N N 131.762 122.319 103.227 -9.865 0.151 -1.202 H24 A1AWC 62
A1AWC H26 H26 H 0 1 N N N N N N 129.893 123.627 105.845 -13.091 0.554 0.185 H26 A1AWC 63
A1AWC H27 H27 H 0 1 N N N N N N 130.245 122.208 104.916 -12.246 0.149 -1.209 H27 A1AWC 64
A1AWC H28 H28 H 0 1 N N N N N N 131.052 118.617 96.657 0.966 2.816 -0.546 H28 A1AWC 65
A1AWC H29 H29 H 0 1 N N N N N N 124.428 118.847 94.157 4.639 -4.281 0.442 H29 A1AWC 66
A1AWC H30 H30 H 0 1 N N N N N N 127.220 115.365 90.974 7.361 1.165 2.421 H30 A1AWC 67
A1AWC H31 H31 H 0 1 N N N N N N 127.910 115.166 88.648 9.237 2.232 1.295 H31 A1AWC 68
A1AWC H32 H32 H 0 1 N N N N N N 129.595 116.704 87.702 9.046 2.990 -1.035 H32 A1AWC 69
A1AWC H33 H33 H 0 1 N N N N N N 130.596 118.446 89.080 6.970 2.688 -2.277 H33 A1AWC 70
A1AWC H34 H34 H 0 1 N N N N N N 130.760 119.587 91.319 4.610 1.858 -2.337 H34 A1AWC 71
A1AWC H35 H35 H 0 1 N N N N N N 131.291 120.145 93.670 2.416 -0.274 -1.852 H35 A1AWC 72
A1AWC H36 H36 H 0 1 N N N N N N 129.718 121.013 93.684 2.301 1.474 -2.167 H36 A1AWC 73
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A1AWC C25 C24 DOUB Y N 1
A1AWC C25 C26 SING Y N 2
A1AWC C24 C23 SING Y N 3
A1AWC C26 C27 DOUB Y N 4
A1AWC C23 C22 DOUB Y N 5
A1AWC C27 C22 SING Y N 6
A1AWC C27 C28 SING Y N 7
A1AWC C22 N4 SING Y N 8
A1AWC C28 C29 DOUB Y N 9
A1AWC N4 C21 DOUB Y N 10
A1AWC C29 C21 SING Y N 11
A1AWC C29 C30 SING N N 12
A1AWC C21 C20 SING N N 13
A1AWC C30 C10 SING N N 14
A1AWC O2 C18 SING N N 15
A1AWC C18 C17 DOUB Y N 16
A1AWC C18 C19 SING Y N 17
A1AWC C17 C16 SING Y N 18
A1AWC C20 O3 SING N N 19
A1AWC C20 C11 SING N N 20
A1AWC O3 C19 SING N N 21
A1AWC C19 C14 DOUB Y N 22
A1AWC C16 C15 DOUB Y N 23
A1AWC C10 O1 SING N N 24
A1AWC C10 C11 SING N N 25
A1AWC C10 C8 SING N N 26
A1AWC C14 C15 SING Y N 27
A1AWC C14 C11 SING N N 28
A1AWC C15 C9 SING N N 29
A1AWC C11 C12 SING N N 30
A1AWC C9 C8 SING N N 31
A1AWC C8 N3 SING N N 32
A1AWC C12 C13 SING N N 33
A1AWC N3 C13 SING N N 34
A1AWC N3 C7 SING N N 35
A1AWC C6 C7 SING N N 36
A1AWC C6 C5 SING N N 37
A1AWC C5 C4 SING N N 38
A1AWC C4 C3 SING N N 39
A1AWC C3 C2 SING N N 40
A1AWC C2 N2 SING N N 41
A1AWC N2 C1 SING N N 42
A1AWC C1 N1 DOUB N N 43
A1AWC C1 N5 SING N N 44
A1AWC C12 H1 SING N N 45
A1AWC C12 H2 SING N N 46
A1AWC C13 H3 SING N N 47
A1AWC C13 H4 SING N N 48
A1AWC C16 H5 SING N N 49
A1AWC C17 H6 SING N N 50
A1AWC N1 H7 SING N N 51
A1AWC C2 H8 SING N N 52
A1AWC C2 H9 SING N N 53
A1AWC C3 H10 SING N N 54
A1AWC C3 H11 SING N N 55
A1AWC C4 H12 SING N N 56
A1AWC C4 H13 SING N N 57
A1AWC C5 H14 SING N N 58
A1AWC C5 H15 SING N N 59
A1AWC C6 H16 SING N N 60
A1AWC C6 H17 SING N N 61
A1AWC C7 H18 SING N N 62
A1AWC C7 H19 SING N N 63
A1AWC C20 H20 SING N N 64
A1AWC C8 H21 SING N N 65
A1AWC C9 H22 SING N N 66
A1AWC C9 H23 SING N N 67
A1AWC N2 H24 SING N N 68
A1AWC N5 H26 SING N N 69
A1AWC N5 H27 SING N N 70
A1AWC O1 H28 SING N N 71
A1AWC O2 H29 SING N N 72
A1AWC C23 H30 SING N N 73
A1AWC C24 H31 SING N N 74
A1AWC C25 H32 SING N N 75
A1AWC C26 H33 SING N N 76
A1AWC C28 H34 SING N N 77
A1AWC C30 H35 SING N N 78
A1AWC C30 H36 SING N N 79
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
A1AWC SMILES ACDLabs 12.01 "N=C(N)NCCCCCCN1CCC23c4c5OC2c2nc6ccccc6cc2CC3(O)C1Cc4ccc5O"
A1AWC InChI InChI 1.06 "InChI=1S/C30H35N5O3/c31-28(32)33-12-5-1-2-6-13-35-14-11-29-24-19-9-10-22(36)26(24)38-27(29)25-20(17-30(29,37)23(35)16-19)15-18-7-3-4-8-21(18)34-25/h3-4,7-10,15,23,27,36-37H,1-2,5-6,11-14,16-17H2,(H4,31,32,33)/t23-,27+,29+,30-/m1/s1"
A1AWC InChIKey InChI 1.06 OXALQPRDLLCJNB-ANYDQABYSA-N
A1AWC SMILES_CANONICAL CACTVS 3.385 "NC(=N)NCCCCCCN1CC[C@]23[C@H]4Oc5c(O)ccc(C[C@@H]1[C@]2(O)Cc6cc7ccccc7nc46)c35"
A1AWC SMILES CACTVS 3.385 "NC(=N)NCCCCCCN1CC[C]23[CH]4Oc5c(O)ccc(C[CH]1[C]2(O)Cc6cc7ccccc7nc46)c35"
A1AWC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(/N)\NCCCCCCN1CC[C@]23c4c5ccc(c4O[C@H]2c6c(cc7ccccc7n6)C[C@]3([C@H]1C5)O)O"
A1AWC SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)cc3c(n2)C4C56CCN(C(C5(C3)O)Cc7c6c(c(cc7)O)O4)CCCCCCNC(=N)N"
#
_pdbx_chem_comp_identifier.comp_id A1AWC
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program ACDLabs
_pdbx_chem_comp_identifier.program_version 12.01
_pdbx_chem_comp_identifier.identifier "N-{6-[(4bS,8R,8aS,15bR)-1,8a-dihydroxy-5,6,8,8a,9,15b-hexahydro-7H-4,8-methano[1]benzofuro[3,2-c]pyrido[3,4-b]acridin-7-yl]hexyl}guanidine"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
A1AWC "Create component" 2024-07-01 RCSB
A1AWC "Initial release" 2025-04-02 RCSB
#