data_A1AWR # _chem_comp.id A1AWR _chem_comp.name "1-{(3S)-4-[(7M)-7-[6-amino-4-methyl-3-(trifluoromethyl)pyridin-2-yl]-6-chloro-8-fluoro-2-{[(2S)-1-methylpyrrolidin-2-yl]methoxy}quinazolin-4-yl]-3-methylpiperazin-1-yl}propan-1-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H34 Cl F4 N7 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "divarasib, bound form" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-07-05 _chem_comp.pdbx_modified_date 2024-12-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 624.073 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AWR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9C76 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AWR N1 N1 N 0 1 N N N N N N 3.495 4.573 -3.600 6.317 2.485 2.648 N1 A1AWR 1 A1AWR C2 C1 C 0 1 Y N N N N N 0.641 6.382 -4.589 3.895 1.038 0.450 C2 A1AWR 2 A1AWR C3 C2 C 0 1 Y N N N N N -0.793 6.197 -4.240 2.421 0.894 0.397 C3 A1AWR 3 A1AWR C4 C3 C 0 1 Y N N N N N -1.652 5.454 -5.047 1.615 2.032 0.237 C4 A1AWR 4 A1AWR C5 C4 C 0 1 Y N N N N N -2.969 5.280 -4.708 0.258 1.924 0.185 C5 A1AWR 5 A1AWR C6 C5 C 0 1 Y N N N N N -3.483 5.843 -3.519 -0.346 0.665 0.292 C6 A1AWR 6 A1AWR C11 C6 C 0 1 N N N N N N -7.503 5.114 -5.557 -4.106 2.815 -1.392 C11 A1AWR 7 A1AWR C12 C7 C 0 1 N N N N N N -7.300 3.104 -4.165 -4.258 3.056 1.117 C12 A1AWR 8 A1AWR C21 C8 C 0 1 N N N N N N -2.990 11.092 -0.746 -1.250 -7.569 -0.021 C21 A1AWR 9 A1AWR C22 C9 C 0 1 N N N N N N -4.023 10.017 -0.427 -1.049 -6.595 1.163 C22 A1AWR 10 A1AWR C24 C10 C 0 1 Y N N N N N -1.269 6.755 -3.060 1.849 -0.365 0.499 C24 A1AWR 11 A1AWR C25 C11 C 0 1 Y N N N N N 1.148 7.399 -5.423 4.677 0.517 -0.578 C25 A1AWR 12 A1AWR C29 C12 C 0 1 N N N N N N 0.248 8.420 -6.065 4.032 -0.192 -1.741 C29 A1AWR 13 A1AWR N3 N2 N 0 1 Y N N N N N -3.068 7.153 -1.519 -0.151 -1.687 0.553 N3 A1AWR 14 A1AWR C8 C13 C 0 1 Y N N N N N -4.347 6.962 -1.205 -1.464 -1.777 0.501 C8 A1AWR 15 A1AWR N4 N3 N 0 1 Y N N N N N -5.236 6.279 -1.928 -2.252 -0.718 0.351 N4 A1AWR 16 A1AWR C9 C14 C 0 1 Y N N N N N -4.842 5.713 -3.078 -1.753 0.505 0.243 C9 A1AWR 17 A1AWR N5 N4 N 0 1 N N N N N N -5.810 5.001 -3.792 -2.583 1.595 0.088 N5 A1AWR 18 A1AWR C10 C15 C 0 1 N N N N N N -6.026 5.145 -5.230 -3.337 1.508 -1.169 C10 A1AWR 19 A1AWR C7 C16 C 0 1 Y N N N N N -2.616 6.589 -2.686 0.453 -0.493 0.454 C7 A1AWR 20 A1AWR N2 N5 N 0 1 Y N N N N N 1.431 5.473 -4.001 4.458 1.669 1.474 N2 A1AWR 21 A1AWR C1 C17 C 0 1 Y N N N N N 2.760 5.510 -4.208 5.769 1.818 1.558 C1 A1AWR 22 A1AWR O1 O1 O 0 1 N N N N N N -9.825 3.938 -6.591 -6.890 3.583 0.694 O1 A1AWR 23 A1AWR O2 O2 O 0 1 N N N N N N -4.794 7.512 -0.075 -2.035 -3.001 0.605 O2 A1AWR 24 A1AWR C14 C18 C 0 1 N N N N N N -7.821 4.780 -2.342 -2.662 1.750 2.531 C14 A1AWR 25 A1AWR N6 N6 N 0 1 N N N N N N -8.124 3.861 -5.116 -4.919 3.088 -0.197 N6 A1AWR 26 A1AWR C15 C19 C 0 1 N N N N N N -9.358 3.498 -5.545 -6.235 3.360 -0.303 C15 A1AWR 27 A1AWR N7 N7 N 0 1 N N N N N N -1.909 9.175 0.121 -2.637 -5.680 -0.429 N7 A1AWR 28 A1AWR C16 C20 C 0 1 N N N N N N -10.167 2.549 -4.692 -6.892 3.388 -1.658 C16 A1AWR 29 A1AWR C19 C21 C 0 1 N N S N N N -3.285 9.223 0.655 -1.977 -5.403 0.865 C19 A1AWR 30 A1AWR C18 C22 C 0 1 N N N N N N -3.844 7.853 0.945 -1.155 -4.115 0.766 C18 A1AWR 31 A1AWR C17 C23 C 0 1 N N N N N N -11.647 2.607 -4.988 -8.377 3.718 -1.499 C17 A1AWR 32 A1AWR C13 C24 C 0 1 N N S N N N -6.728 4.058 -3.120 -3.483 1.740 1.240 C13 A1AWR 33 A1AWR C20 C25 C 0 1 N N N N N N -1.683 10.316 -0.772 -2.637 -7.158 -0.576 C20 A1AWR 34 A1AWR C26 C26 C 0 1 Y N N N N N 2.537 7.443 -5.644 6.054 0.657 -0.518 C26 A1AWR 35 A1AWR C27 C27 C 0 1 N N N N N N 3.171 8.500 -6.518 6.932 0.106 -1.612 C27 A1AWR 36 A1AWR C28 C28 C 0 1 Y N N N N N 3.346 6.497 -5.035 6.607 1.315 0.567 C28 A1AWR 37 A1AWR C23 C29 C 0 1 N N N N N N -0.884 9.038 1.148 -4.007 -5.149 -0.445 C23 A1AWR 38 A1AWR CL1 CL1 CL 0 0 N N N N N N -1.054 4.753 -6.513 2.356 3.596 0.105 CL1 A1AWR 39 A1AWR F1 F1 F 0 1 N N N N N N -0.442 7.472 -2.259 2.629 -1.459 0.647 F1 A1AWR 40 A1AWR F2 F2 F 0 1 N N N N N N -1.008 8.036 -6.199 4.811 -0.009 -2.888 F2 A1AWR 41 A1AWR F3 F3 F 0 1 N N N N N N 0.602 8.723 -7.302 3.933 -1.558 -1.458 F3 A1AWR 42 A1AWR F4 F4 F 0 1 N N N N N N 0.218 9.569 -5.413 2.754 0.334 -1.957 F4 A1AWR 43 A1AWR H2 H1 H 0 1 N N N N N N 2.898 3.974 -3.067 5.738 2.838 3.341 H2 A1AWR 44 A1AWR H1 H2 H 0 1 N N N N N N 3.981 4.033 -4.287 7.278 2.595 2.717 H1 A1AWR 45 A1AWR H3 H3 H 0 1 N N N N N N -3.618 4.708 -5.355 -0.351 2.807 0.063 H3 A1AWR 46 A1AWR H6 H4 H 0 1 N N N N N N -7.999 5.956 -5.052 -3.402 3.632 -1.549 H6 A1AWR 47 A1AWR H7 H5 H 0 1 N N N N N N -7.630 5.213 -6.645 -4.755 2.715 -2.261 H7 A1AWR 48 A1AWR H8 H6 H 0 1 N N N N N N -7.919 2.343 -3.668 -3.568 3.896 1.200 H8 A1AWR 49 A1AWR H9 H7 H 0 1 N N N N N N -6.476 2.612 -4.703 -5.006 3.117 1.908 H9 A1AWR 50 A1AWR H24 H8 H 0 1 N N N N N N -2.973 11.868 0.034 -0.476 -7.427 -0.774 H24 A1AWR 51 A1AWR H25 H9 H 0 1 N N N N N N -3.193 11.557 -1.722 -1.262 -8.602 0.328 H25 A1AWR 52 A1AWR H27 H10 H 0 1 N N N N N N -4.957 10.454 -0.043 -1.336 -7.073 2.099 H27 A1AWR 53 A1AWR H26 H11 H 0 1 N N N N N N -4.244 9.394 -1.306 -0.011 -6.265 1.208 H26 A1AWR 54 A1AWR H4 H12 H 0 1 N N N N N N -5.523 4.319 -5.755 -4.041 0.678 -1.115 H4 A1AWR 55 A1AWR H5 H13 H 0 1 N N N N N N -5.603 6.104 -5.564 -2.647 1.348 -1.997 H5 A1AWR 56 A1AWR H12 H14 H 0 1 N N N N N N -7.362 5.454 -1.603 -3.319 1.948 3.378 H12 A1AWR 57 A1AWR H13 H15 H 0 1 N N N N N N -8.440 5.366 -3.037 -2.182 0.781 2.664 H13 A1AWR 58 A1AWR H11 H16 H 0 1 N N N N N N -8.450 4.042 -1.823 -1.901 2.528 2.472 H11 A1AWR 59 A1AWR H14 H18 H 0 1 N N N N N N -9.813 1.524 -4.875 -6.415 4.148 -2.278 H14 A1AWR 60 A1AWR H15 H19 H 0 1 N N N N N N -10.010 2.808 -3.634 -6.786 2.413 -2.134 H15 A1AWR 61 A1AWR H21 H20 H 0 1 N N N N N N -3.291 9.812 1.584 -2.725 -5.309 1.651 H21 A1AWR 62 A1AWR H19 H21 H 0 1 N N N N N N -4.342 7.857 1.926 -0.486 -4.177 -0.093 H19 A1AWR 63 A1AWR H20 H22 H 0 1 N N N N N N -3.028 7.115 0.951 -0.569 -3.988 1.675 H20 A1AWR 64 A1AWR H17 H23 H 0 1 N Y N N N N -12.180 1.897 -4.338 -8.854 2.958 -0.879 H17 A1AWR 65 A1AWR H18 H24 H 0 1 N N N N N N -12.019 3.625 -4.800 -8.483 4.693 -1.023 H18 A1AWR 66 A1AWR H16 H25 H 0 1 N N N N N N -11.821 2.341 -6.041 -8.852 3.738 -2.480 H16 A1AWR 67 A1AWR H10 H26 H 0 1 N N N N N N -6.146 3.460 -2.404 -4.184 0.906 1.261 H10 A1AWR 68 A1AWR H23 H27 H 0 1 N N N N N N -1.457 9.971 -1.792 -2.732 -7.441 -1.624 H23 A1AWR 69 A1AWR H22 H28 H 0 1 N N N N N N -0.855 10.939 -0.403 -3.436 -7.603 0.018 H22 A1AWR 70 A1AWR H32 H29 H 0 1 N N N N N N 3.433 9.375 -5.905 6.989 0.825 -2.430 H32 A1AWR 71 A1AWR H33 H30 H 0 1 N N N N N N 4.081 8.093 -6.984 7.932 -0.077 -1.219 H33 A1AWR 72 A1AWR H31 H31 H 0 1 N N N N N N 2.461 8.801 -7.302 6.510 -0.829 -1.980 H31 A1AWR 73 A1AWR H34 H32 H 0 1 N N N N N N 4.415 6.513 -5.190 7.677 1.441 0.642 H34 A1AWR 74 A1AWR H29 H33 H 0 1 N N N N N N -1.112 8.168 1.781 -3.980 -4.070 -0.291 H29 A1AWR 75 A1AWR H30 H34 H 0 1 N N N N N N 0.097 8.897 0.670 -4.469 -5.366 -1.408 H30 A1AWR 76 A1AWR H28 H35 H 0 1 N N N N N N -0.863 9.946 1.768 -4.587 -5.616 0.350 H28 A1AWR 77 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AWR F3 C29 SING N N 1 A1AWR O1 C15 DOUB N N 2 A1AWR C27 C26 SING N N 3 A1AWR CL1 C4 SING N N 4 A1AWR F2 C29 SING N N 5 A1AWR C29 C25 SING N N 6 A1AWR C29 F4 SING N N 7 A1AWR C26 C25 DOUB Y N 8 A1AWR C26 C28 SING Y N 9 A1AWR C11 C10 SING N N 10 A1AWR C11 N6 SING N N 11 A1AWR C15 N6 SING N N 12 A1AWR C15 C16 SING N N 13 A1AWR C25 C2 SING Y N 14 A1AWR C10 N5 SING N N 15 A1AWR N6 C12 SING N N 16 A1AWR C4 C5 DOUB Y N 17 A1AWR C4 C3 SING Y N 18 A1AWR C28 C1 DOUB Y N 19 A1AWR C17 C16 SING N N 20 A1AWR C5 C6 SING Y N 21 A1AWR C2 C3 SING N N 22 A1AWR C2 N2 DOUB Y N 23 A1AWR C3 C24 DOUB Y N 24 A1AWR C1 N2 SING Y N 25 A1AWR C1 N1 SING N N 26 A1AWR C12 C13 SING N N 27 A1AWR N5 C13 SING N N 28 A1AWR N5 C9 SING N N 29 A1AWR C6 C9 DOUB Y N 30 A1AWR C6 C7 SING Y N 31 A1AWR C13 C14 SING N N 32 A1AWR C9 N4 SING Y N 33 A1AWR C24 C7 SING Y N 34 A1AWR C24 F1 SING N N 35 A1AWR C7 N3 DOUB Y N 36 A1AWR N4 C8 DOUB Y N 37 A1AWR N3 C8 SING Y N 38 A1AWR C8 O2 SING N N 39 A1AWR C20 C21 SING N N 40 A1AWR C20 N7 SING N N 41 A1AWR C21 C22 SING N N 42 A1AWR C22 C19 SING N N 43 A1AWR O2 C18 SING N N 44 A1AWR N7 C19 SING N N 45 A1AWR N7 C23 SING N N 46 A1AWR C19 C18 SING N N 47 A1AWR N1 H2 SING N N 48 A1AWR N1 H1 SING N N 49 A1AWR C5 H3 SING N N 50 A1AWR C11 H6 SING N N 51 A1AWR C11 H7 SING N N 52 A1AWR C12 H8 SING N N 53 A1AWR C12 H9 SING N N 54 A1AWR C21 H24 SING N N 55 A1AWR C21 H25 SING N N 56 A1AWR C22 H27 SING N N 57 A1AWR C22 H26 SING N N 58 A1AWR C10 H4 SING N N 59 A1AWR C10 H5 SING N N 60 A1AWR C14 H12 SING N N 61 A1AWR C14 H13 SING N N 62 A1AWR C14 H11 SING N N 63 A1AWR C16 H14 SING N N 64 A1AWR C16 H15 SING N N 65 A1AWR C19 H21 SING N N 66 A1AWR C18 H19 SING N N 67 A1AWR C18 H20 SING N N 68 A1AWR C17 H17 SING N N 69 A1AWR C17 H18 SING N N 70 A1AWR C17 H16 SING N N 71 A1AWR C13 H10 SING N N 72 A1AWR C20 H23 SING N N 73 A1AWR C20 H22 SING N N 74 A1AWR C27 H32 SING N N 75 A1AWR C27 H33 SING N N 76 A1AWR C27 H31 SING N N 77 A1AWR C28 H34 SING N N 78 A1AWR C23 H29 SING N N 79 A1AWR C23 H30 SING N N 80 A1AWR C23 H28 SING N N 81 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AWR SMILES ACDLabs 12.01 "CN1CCCC1COc1nc2c(F)c(c3nc(N)cc(C)c3C(F)(F)F)c(Cl)cc2c(n1)N1CCN(CC1C)C(=O)CC" A1AWR InChI InChI 1.06 "InChI=1S/C29H34ClF4N7O2/c1-5-21(42)40-9-10-41(16(3)13-40)27-18-12-19(30)22(26-23(29(32,33)34)15(2)11-20(35)36-26)24(31)25(18)37-28(38-27)43-14-17-7-6-8-39(17)4/h11-12,16-17H,5-10,13-14H2,1-4H3,(H2,35,36)/t16-,17-/m0/s1" A1AWR InChIKey InChI 1.06 QEAJZIRHKLXVLR-IRXDYDNUSA-N A1AWR SMILES_CANONICAL CACTVS 3.385 "CCC(=O)N1CCN([C@@H](C)C1)c2nc(OC[C@@H]3CCCN3C)nc4c(F)c(c(Cl)cc24)c5nc(N)cc(C)c5C(F)(F)F" A1AWR SMILES CACTVS 3.385 "CCC(=O)N1CCN([CH](C)C1)c2nc(OC[CH]3CCCN3C)nc4c(F)c(c(Cl)cc24)c5nc(N)cc(C)c5C(F)(F)F" A1AWR SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC(=O)N1CCN([C@H](C1)C)c2c3cc(c(c(c3nc(n2)OC[C@@H]4CCCN4C)F)c5c(c(cc(n5)N)C)C(F)(F)F)Cl" A1AWR SMILES "OpenEye OEToolkits" 2.0.7 "CCC(=O)N1CCN(C(C1)C)c2c3cc(c(c(c3nc(n2)OCC4CCCN4C)F)c5c(c(cc(n5)N)C)C(F)(F)F)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AWR "SYSTEMATIC NAME" ACDLabs 12.01 "1-{(3S)-4-[(7M)-7-[6-amino-4-methyl-3-(trifluoromethyl)pyridin-2-yl]-6-chloro-8-fluoro-2-{[(2S)-1-methylpyrrolidin-2-yl]methoxy}quinazolin-4-yl]-3-methylpiperazin-1-yl}propan-1-one" A1AWR "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-[(3~{S})-4-[7-[6-azanyl-4-methyl-3-(trifluoromethyl)pyridin-2-yl]-6-chloranyl-8-fluoranyl-2-[[(2~{S})-1-methylpyrrolidin-2-yl]methoxy]quinazolin-4-yl]-3-methyl-piperazin-1-yl]propan-1-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AWR "Create component" 2024-07-05 RCSB A1AWR "Modify PCM" 2024-09-27 PDBE A1AWR "Initial release" 2024-12-11 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1AWR _pdbx_chem_comp_synonyms.name "divarasib, bound form" _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1AWR _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C17 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #