data_A1AWU # _chem_comp.id A1AWU _chem_comp.name "[(2~{R},3~{R},4~{R},5~{S})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl [(2~{R},3~{R},4~{S},5~{R})-2-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-5-(hydroxymethyl)-4-oxidanyl-oxolan-3-yl] hydrogen phosphate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H25 N10 O11 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-07-08 _chem_comp.pdbx_modified_date 2024-08-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 612.447 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AWU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9CIW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AWU C02 C1 C 0 1 N N N N N N 34.262 18.567 -25.444 -5.762 -3.000 1.441 C02 A1AWU 1 A1AWU C04 C2 C 0 1 N N N N N N 34.969 19.678 -23.326 -3.408 -3.030 1.490 C04 A1AWU 2 A1AWU C07 C3 C 0 1 Y N N N N N 33.306 20.854 -24.899 -4.442 -1.002 1.093 C07 A1AWU 3 A1AWU C08 C4 C 0 1 Y N N N N N 33.372 19.771 -25.771 -5.699 -1.610 1.185 C08 A1AWU 4 A1AWU C10 C5 C 0 1 Y N N N N N 32.016 21.242 -26.592 -6.031 0.495 0.789 C10 A1AWU 5 A1AWU C12 C6 C 0 1 N N R N N N 32.054 23.049 -24.896 -3.664 1.363 0.657 C12 A1AWU 6 A1AWU C14 C7 C 0 1 N N R N N N 31.684 23.687 -23.505 -3.196 1.387 -0.811 C14 A1AWU 7 A1AWU C18 C8 C 0 1 N N N N N N 29.668 26.819 -25.767 1.231 -1.240 -1.979 C18 A1AWU 8 A1AWU C19 C9 C 0 1 N N R N N N 28.477 27.389 -26.581 2.687 -0.988 -1.583 C19 A1AWU 9 A1AWU C20 C10 C 0 1 N N R N N N 28.215 26.649 -27.652 3.603 -2.114 -2.128 C20 A1AWU 10 A1AWU C22 C11 C 0 1 N N R N N N 29.485 26.949 -28.565 4.802 -2.058 -1.151 C22 A1AWU 11 A1AWU C24 C12 C 0 1 N N S N N N 29.485 28.283 -28.618 4.241 -1.348 0.096 C24 A1AWU 12 A1AWU C26 C13 C 0 1 Y N N N N N 27.382 29.673 -28.552 4.567 1.145 -0.109 C26 A1AWU 13 A1AWU C28 C14 C 0 1 Y N N N N N 27.717 31.015 -30.214 6.441 1.435 0.943 C28 A1AWU 14 A1AWU C29 C15 C 0 1 Y N N N N N 27.728 31.983 -31.244 7.621 1.879 1.563 C29 A1AWU 15 A1AWU C32 C16 C 0 1 Y N N N N N 29.795 31.218 -31.928 8.075 -0.298 2.180 C32 A1AWU 16 A1AWU C34 C17 C 0 1 Y N N N N N 28.806 30.170 -30.104 6.140 0.064 0.994 C34 A1AWU 17 A1AWU C38 C18 C 0 1 N N S N N N 32.678 24.456 -23.185 -3.510 2.827 -1.286 C38 A1AWU 18 A1AWU C40 C19 C 0 1 N N R N N N 33.797 24.368 -24.384 -3.601 3.599 0.055 C40 A1AWU 19 A1AWU C41 C20 C 0 1 N N N N N N 35.214 24.354 -23.759 -4.464 4.852 -0.102 C41 A1AWU 20 A1AWU N03 N1 N 0 1 N N N N N N 35.038 18.551 -24.235 -4.603 -3.678 1.591 N03 A1AWU 21 A1AWU N05 N2 N 0 1 N N N N N N 35.757 19.663 -22.092 -2.247 -3.744 1.646 N05 A1AWU 22 A1AWU N06 N3 N 0 1 N N N N N N 34.111 20.834 -23.642 -3.336 -1.740 1.247 N06 A1AWU 23 A1AWU N09 N4 N 0 1 Y N N N N N 32.561 20.053 -26.799 -6.629 -0.643 0.991 N09 A1AWU 24 A1AWU N11 N5 N 0 1 Y N N N N N 32.460 21.745 -25.446 -4.678 0.322 0.839 N11 A1AWU 25 A1AWU N25 N6 N 0 1 Y N N N N N 28.573 29.356 -29.055 4.956 -0.089 0.318 N25 A1AWU 26 A1AWU N27 N7 N 0 1 Y N N N N N 26.854 30.681 -29.234 5.439 2.039 0.259 N27 A1AWU 27 A1AWU N30 N8 N 0 1 N N N N N N 26.599 32.906 -31.402 7.967 3.219 1.551 N30 A1AWU 28 A1AWU N31 N9 N 0 1 Y N N N N N 28.771 32.052 -32.069 8.397 0.982 2.163 N31 A1AWU 29 A1AWU N33 N10 N 0 1 Y N N N N N 29.826 30.295 -30.973 6.977 -0.758 1.618 N33 A1AWU 30 A1AWU O01 O1 O 0 1 N N N N N N 34.311 17.648 -26.197 -6.836 -3.571 1.530 O01 A1AWU 31 A1AWU O13 O2 O 0 1 N N N N N N 33.572 23.251 -25.040 -4.229 2.652 0.949 O13 A1AWU 32 A1AWU O15 O3 O 0 1 N N N N N N 30.497 24.449 -23.558 -1.794 1.125 -0.894 O15 A1AWU 33 A1AWU O17 O4 O 0 1 N N N N N N 29.824 25.435 -26.004 0.411 -0.184 -1.475 O17 A1AWU 34 A1AWU O21 O5 O 0 1 N N N N N N 28.079 25.272 -27.362 2.948 -3.382 -2.060 O21 A1AWU 35 A1AWU O23 O6 O 0 1 N N N N N N 29.291 26.387 -29.838 5.875 -1.303 -1.718 O23 A1AWU 36 A1AWU O35 O7 O 0 1 N N N N N N 28.896 28.723 -27.253 2.849 -1.086 -0.152 O35 A1AWU 37 A1AWU O36 O8 O 0 1 N N N N N N 29.409 22.955 -25.417 -1.798 -1.378 -1.218 O36 A1AWU 38 A1AWU O37 O9 O 0 1 N N N N N N 28.035 24.676 -24.326 -1.491 0.053 -3.275 O37 A1AWU 39 A1AWU O39 O10 O 0 1 N N N N N N 33.248 24.046 -21.961 -4.754 2.873 -1.987 O39 A1AWU 40 A1AWU O42 O11 O 0 1 N N N N N N 35.991 25.339 -24.403 -4.437 5.604 1.112 O42 A1AWU 41 A1AWU P16 P1 P 0 1 N N N N N N 29.429 24.350 -24.829 -1.181 -0.123 -1.705 P16 A1AWU 42 A1AWU H101 H1 H 0 0 N N N N N N 31.316 21.729 -27.255 -6.530 1.435 0.607 H101 A1AWU 43 A1AWU H121 H2 H 0 0 N N N N N N 31.551 23.632 -25.681 -2.815 1.173 1.313 H121 A1AWU 44 A1AWU H141 H3 H 0 0 N N N N N N 31.563 22.864 -22.785 -3.754 0.661 -1.402 H141 A1AWU 45 A1AWU H182 H4 H 0 0 N N N N N N 29.483 26.982 -24.695 1.151 -1.276 -3.065 H182 A1AWU 46 A1AWU H181 H5 H 0 0 N N N N N N 30.590 27.341 -26.063 0.899 -2.189 -1.559 H181 A1AWU 47 A1AWU H191 H6 H 0 0 N N N N N N 27.608 27.548 -25.926 3.018 -0.014 -1.941 H191 A1AWU 48 A1AWU H201 H7 H 0 0 N N N N N N 27.324 27.013 -28.185 3.922 -1.896 -3.148 H201 A1AWU 49 A1AWU H221 H8 H 0 0 N N N N N N 30.382 26.542 -28.075 5.137 -3.064 -0.899 H221 A1AWU 50 A1AWU H241 H9 H 0 0 N N N N N N 30.516 28.663 -28.669 4.347 -1.993 0.969 H241 A1AWU 51 A1AWU H261 H10 H 0 0 N N N N N N 26.914 29.182 -27.712 3.670 1.352 -0.673 H261 A1AWU 52 A1AWU H321 H11 H 0 0 N N N N N N 30.628 31.292 -32.611 8.735 -0.993 2.678 H321 A1AWU 53 A1AWU H381 H12 H 0 0 N N N N N N 32.368 25.509 -23.115 -2.702 3.217 -1.905 H381 A1AWU 54 A1AWU H401 H13 H 0 0 N N N N N N 33.690 25.262 -25.016 -2.606 3.862 0.415 H401 A1AWU 55 A1AWU H412 H14 H 0 0 N N N N N N 35.149 24.576 -22.684 -4.074 5.462 -0.916 H412 A1AWU 56 A1AWU H411 H15 H 0 0 N N N N N N 35.674 23.365 -23.902 -5.490 4.561 -0.326 H411 A1AWU 57 A1AWU H031 H16 H 0 0 N N N N N N 35.622 17.768 -24.022 -4.621 -4.631 1.771 H031 A1AWU 58 A1AWU H052 H17 H 0 0 N N N N N N 35.714 20.438 -21.462 -2.284 -4.696 1.825 H052 A1AWU 59 A1AWU H051 H18 H 0 0 N N N N N N 36.338 18.878 -21.880 -1.389 -3.296 1.577 H051 A1AWU 60 A1AWU H301 H19 H 0 0 N N N N N N 26.774 33.518 -32.173 7.392 3.864 1.110 H301 A1AWU 61 A1AWU H302 H20 H 0 0 N N N N N N 25.763 32.384 -31.574 8.784 3.513 1.983 H302 A1AWU 62 A1AWU H211 H21 H 0 0 N N N N N N 27.893 24.796 -28.163 3.481 -4.118 -2.391 H211 A1AWU 63 A1AWU H231 H22 H 0 0 N N N N N N 30.049 26.566 -30.382 6.228 -1.676 -2.538 H231 A1AWU 64 A1AWU H1 H23 H 0 1 N N N N N N 27.459 23.939 -24.489 -1.116 0.856 -3.662 H1 A1AWU 65 A1AWU H391 H24 H 0 0 N N N N N N 33.973 24.619 -21.741 -4.995 3.754 -2.305 H391 A1AWU 66 A1AWU H421 H25 H 0 0 N N N N N N 36.866 25.345 -24.032 -4.964 6.415 1.085 H421 A1AWU 67 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AWU C02 O01 DOUB N N 1 A1AWU N03 C02 SING N N 2 A1AWU C04 N03 SING N N 3 A1AWU N05 C04 SING N N 4 A1AWU N06 C04 DOUB N N 5 A1AWU C07 N06 SING N N 6 A1AWU C08 C07 DOUB Y N 7 A1AWU N09 C08 SING Y N 8 A1AWU C10 N09 DOUB Y N 9 A1AWU N11 C10 SING Y N 10 A1AWU C12 N11 SING N N 11 A1AWU O13 C12 SING N N 12 A1AWU C14 C12 SING N N 13 A1AWU P16 O15 SING N N 14 A1AWU C18 O17 SING N N 15 A1AWU C19 C18 SING N N 16 A1AWU C20 C19 SING N N 17 A1AWU O21 C20 SING N N 18 A1AWU C22 C20 SING N N 19 A1AWU O23 C22 SING N N 20 A1AWU C24 C22 SING N N 21 A1AWU C26 N25 SING Y N 22 A1AWU N27 C26 DOUB Y N 23 A1AWU C28 N27 SING Y N 24 A1AWU C29 C28 DOUB Y N 25 A1AWU N30 C29 SING N N 26 A1AWU N31 C29 SING Y N 27 A1AWU C32 N31 DOUB Y N 28 A1AWU N33 C32 SING Y N 29 A1AWU C34 N33 DOUB Y N 30 A1AWU N25 C24 SING N N 31 A1AWU O35 C24 SING N N 32 A1AWU O17 P16 SING N N 33 A1AWU O36 P16 DOUB N N 34 A1AWU O37 P16 SING N N 35 A1AWU O15 C14 SING N N 36 A1AWU C38 C14 SING N N 37 A1AWU O39 C38 SING N N 38 A1AWU C40 C38 SING N N 39 A1AWU C41 C40 SING N N 40 A1AWU O42 C41 SING N N 41 A1AWU C02 C08 SING N N 42 A1AWU C07 N11 SING Y N 43 A1AWU O13 C40 SING N N 44 A1AWU C19 O35 SING N N 45 A1AWU N25 C34 SING Y N 46 A1AWU C28 C34 SING Y N 47 A1AWU C10 H101 SING N N 48 A1AWU C12 H121 SING N N 49 A1AWU C14 H141 SING N N 50 A1AWU C18 H182 SING N N 51 A1AWU C18 H181 SING N N 52 A1AWU C19 H191 SING N N 53 A1AWU C20 H201 SING N N 54 A1AWU C22 H221 SING N N 55 A1AWU C24 H241 SING N N 56 A1AWU C26 H261 SING N N 57 A1AWU C32 H321 SING N N 58 A1AWU C38 H381 SING N N 59 A1AWU C40 H401 SING N N 60 A1AWU C41 H412 SING N N 61 A1AWU C41 H411 SING N N 62 A1AWU N03 H031 SING N N 63 A1AWU N05 H052 SING N N 64 A1AWU N05 H051 SING N N 65 A1AWU N30 H301 SING N N 66 A1AWU N30 H302 SING N N 67 A1AWU O21 H211 SING N N 68 A1AWU O23 H231 SING N N 69 A1AWU O37 H1 SING N N 70 A1AWU O39 H391 SING N N 71 A1AWU O42 H421 SING N N 72 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AWU SMILES ACDLabs 12.01 "NC1=Nc2c(ncn2C2OC(CO)C(O)C2OP(=O)(O)OCC2OC(n3cnc4c(N)ncnc43)C(O)C2O)C(=O)N1" A1AWU InChI InChI 1.06 "InChI=1S/C20H25N10O11P/c21-14-8-15(24-3-23-14)29(4-25-8)18-12(34)10(32)7(40-18)2-38-42(36,37)41-13-11(33)6(1-31)39-19(13)30-5-26-9-16(30)27-20(22)28-17(9)35/h3-7,10-13,18-19,31-34H,1-2H2,(H,36,37)(H2,21,23,24)(H3,22,27,28,35)" A1AWU InChIKey InChI 1.06 ZLNKIMYMVZHDPX-UHFFFAOYSA-N A1AWU SMILES_CANONICAL CACTVS 3.385 "NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO)[C@H](O)[C@H]3O[P](O)(=O)OC[C@H]4O[C@@H]([C@H](O)[C@H]4O)n5cnc6c(N)ncnc56" A1AWU SMILES CACTVS 3.385 "NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO)[CH](O)[CH]3O[P](O)(=O)OC[CH]4O[CH]([CH](O)[CH]4O)n5cnc6c(N)ncnc56" A1AWU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)n(cn2)[C@@H]3[C@@H]([C@H]([C@H](O3)COP(=O)(O)O[C@@H]4[C@H]([C@H](O[C@H]4n5cnc6c5N=C(NC6=O)N)CO)O)O)O)N" A1AWU SMILES "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OC4C(C(OC4n5cnc6c5N=C(NC6=O)N)CO)O)O)O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AWU "SYSTEMATIC NAME" ACDLabs 12.01 "(2S,3R,4R,5S)-2-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-4-hydroxy-5-(hydroxymethyl)oxolan-3-yl [(2R,3R,4S,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl hydrogen (S)-phosphate (non-preferred name)" A1AWU "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(2~{R},3~{R},4~{R},5~{S})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl [(2~{R},3~{R},4~{S},5~{R})-2-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-5-(hydroxymethyl)-4-oxidanyl-oxolan-3-yl] hydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AWU "Create component" 2024-07-08 RCSB A1AWU "Initial release" 2024-09-04 RCSB #