data_A1AZE # _chem_comp.id A1AZE _chem_comp.name "(4-{[5-chloro-4-(5-chlorothiophen-2-yl)pyrimidin-2-yl]amino}phenyl)[4-(pyrrolidin-1-yl)piperidin-1-yl]methanone" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H25 Cl2 N5 O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-07-16 _chem_comp.pdbx_modified_date 2024-07-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 502.459 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AZE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9CMZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AZE C13 C1 C 0 1 Y N N N N N -3.293 -3.344 -38.794 5.441 -0.022 -0.320 C13 A1AZE 1 A1AZE C10 C2 C 0 1 Y N N N N N -2.941 -7.148 -38.879 1.900 -1.083 0.318 C10 A1AZE 2 A1AZE C11 C3 C 0 1 Y N N N N N -2.574 -5.817 -39.004 3.275 -1.154 0.200 C11 A1AZE 3 A1AZE C12 C4 C 0 1 Y N N N N N -3.545 -4.816 -38.695 3.973 0.001 -0.181 C12 A1AZE 4 A1AZE C14 C5 C 0 1 Y N N N N N -2.241 -2.500 -39.057 6.148 0.678 -1.233 C14 A1AZE 5 A1AZE C15 C6 C 0 1 Y N N N N N -2.557 -1.029 -39.036 7.511 0.495 -1.169 C15 A1AZE 6 A1AZE C16 C7 C 0 1 Y N N N N N -3.859 -0.854 -38.758 7.926 -0.348 -0.214 C16 A1AZE 7 A1AZE C02 C8 C 0 1 N N N N N N -11.043 -4.068 -35.519 -4.262 2.626 0.416 C02 A1AZE 8 A1AZE C03 C9 C 0 1 Y N N N N N -9.829 -4.767 -36.132 -2.810 2.547 0.168 C03 A1AZE 9 A1AZE C04 C10 C 0 1 Y N N N N N -9.954 -6.074 -36.654 -1.990 1.815 1.031 C04 A1AZE 10 A1AZE C05 C11 C 0 1 Y N N N N N -8.877 -6.796 -37.203 -0.636 1.743 0.797 C05 A1AZE 11 A1AZE C06 C12 C 0 1 Y N N N N N -7.587 -6.207 -37.264 -0.083 2.399 -0.300 C06 A1AZE 12 A1AZE C08 C13 C 0 1 Y N N N N N -5.151 -6.551 -38.219 1.970 1.143 -0.284 C08 A1AZE 13 A1AZE C21 C14 C 0 1 Y N N N N N -7.429 -4.885 -36.727 -0.896 3.129 -1.162 C21 A1AZE 14 A1AZE C22 C15 C 0 1 Y N N N N N -8.547 -4.189 -36.170 -2.252 3.200 -0.935 C22 A1AZE 15 A1AZE C24 C16 C 0 1 N N N N N N -13.072 -2.356 -35.551 -4.269 0.226 0.906 C24 A1AZE 16 A1AZE C25 C17 C 0 1 N N N N N N -14.349 -2.273 -36.517 -4.924 -0.819 -0.004 C25 A1AZE 17 A1AZE C26 C18 C 0 1 N N N N N N -13.950 -1.966 -37.986 -6.427 -0.866 0.280 C26 A1AZE 18 A1AZE C27 C19 C 0 1 N N N N N N -12.686 -2.673 -38.487 -7.048 0.499 -0.026 C27 A1AZE 19 A1AZE C28 C20 C 0 1 N N N N N N -11.519 -2.485 -37.464 -6.418 1.558 0.884 C28 A1AZE 20 A1AZE C30 C21 C 0 1 N N N N N N -16.581 -2.199 -38.308 -6.557 -3.247 -0.221 C30 A1AZE 21 A1AZE C31 C22 C 0 1 N N N N N N -16.757 -0.708 -38.636 -7.639 -4.208 -0.760 C31 A1AZE 22 A1AZE C32 C23 C 0 1 N N N N N N -15.837 -0.486 -39.836 -8.929 -3.364 -0.824 C32 A1AZE 23 A1AZE C33 C24 C 0 1 N N N N N N -15.101 -1.798 -40.185 -8.519 -1.965 -0.318 C33 A1AZE 24 A1AZE N07 N1 N 0 1 N N N N N N -6.477 -7.015 -37.824 1.288 2.324 -0.535 N07 A1AZE 25 A1AZE N09 N2 N 0 1 Y N N N N N -4.193 -7.508 -38.504 1.286 0.065 0.070 N09 A1AZE 26 A1AZE N19 N3 N 0 1 Y N N N N N -4.778 -5.185 -38.327 3.287 1.121 -0.415 N19 A1AZE 27 A1AZE N23 N4 N 0 1 N N N N N N -11.836 -3.016 -36.144 -4.955 1.512 0.724 N23 A1AZE 28 A1AZE N29 N5 N 0 1 N N N N N N -15.192 -2.498 -38.817 -7.053 -1.890 -0.567 N29 A1AZE 29 A1AZE O01 O1 O 0 1 N N N N N N -11.402 -4.452 -34.426 -4.834 3.697 0.343 O01 A1AZE 30 A1AZE S17 S1 S 0 1 Y N N N N N -4.704 -2.363 -38.512 6.542 -0.959 0.681 S17 A1AZE 31 A1AZE CL18 CL1 CL 0 0 N N N N N N -4.882 0.559 -38.597 9.582 -0.768 0.097 CL18 A1AZE 32 A1AZE CL20 CL2 CL 0 0 N N N N N N -0.923 -5.398 -39.544 4.119 -2.638 0.517 CL20 A1AZE 33 A1AZE H1 H1 H 0 1 N N N N N N -2.211 -7.917 -39.085 1.331 -1.954 0.606 H1 A1AZE 34 A1AZE H2 H2 H 0 1 N N N N N N -1.248 -2.870 -39.266 5.681 1.330 -1.956 H2 A1AZE 35 A1AZE H3 H3 H 0 1 N N N N N N -1.846 -0.236 -39.217 8.196 0.993 -1.840 H3 A1AZE 36 A1AZE H4 H4 H 0 1 N N N N N N -10.926 -6.544 -36.631 -2.419 1.306 1.882 H4 A1AZE 37 A1AZE H5 H5 H 0 1 N N N N N N -9.032 -7.797 -37.577 -0.002 1.178 1.463 H5 A1AZE 38 A1AZE H6 H6 H 0 1 N N N N N N -6.458 -4.412 -36.744 -0.463 3.636 -2.011 H6 A1AZE 39 A1AZE H7 H7 H 0 1 N N N N N N -8.404 -3.196 -35.769 -2.882 3.767 -1.604 H7 A1AZE 40 A1AZE H8 H8 H 0 1 N N N N N N -12.801 -1.330 -35.261 -4.354 -0.090 1.945 H8 A1AZE 41 A1AZE H9 H9 H 0 1 N N N N N N -13.362 -2.926 -34.656 -3.217 0.332 0.641 H9 A1AZE 42 A1AZE H10 H10 H 0 1 N N N N N N -15.016 -1.476 -36.156 -4.759 -0.548 -1.047 H10 A1AZE 43 A1AZE H11 H11 H 0 1 N N N N N N -14.880 -3.236 -36.487 -4.485 -1.798 0.191 H11 A1AZE 44 A1AZE H12 H12 H 0 1 N N N N N N -13.856 -0.879 -38.127 -6.590 -1.113 1.329 H12 A1AZE 45 A1AZE H13 H13 H 0 1 N N N N N N -12.894 -3.746 -38.607 -6.863 0.757 -1.068 H13 A1AZE 46 A1AZE H14 H14 H 0 1 N N N N N N -12.391 -2.246 -39.457 -8.123 0.458 0.154 H14 A1AZE 47 A1AZE H15 H15 H 0 1 N N N N N N -10.628 -3.004 -37.847 -6.784 2.545 0.603 H15 A1AZE 48 A1AZE H16 H16 H 0 1 N N N N N N -11.305 -1.410 -37.369 -6.678 1.350 1.921 H16 A1AZE 49 A1AZE H17 H17 H 0 1 N N N N N N -17.333 -2.810 -38.829 -6.460 -3.352 0.860 H17 A1AZE 50 A1AZE H18 H18 H 0 1 N N N N N N -16.652 -2.376 -37.225 -5.602 -3.438 -0.708 H18 A1AZE 51 A1AZE H19 H19 H 0 1 N N N N N N -16.450 -0.081 -37.786 -7.368 -4.562 -1.754 H19 A1AZE 52 A1AZE H20 H20 H 0 1 N N N N N N -17.802 -0.485 -38.897 -7.769 -5.050 -0.081 H20 A1AZE 53 A1AZE H21 H21 H 0 1 N N N N N N -15.099 0.292 -39.591 -9.292 -3.305 -1.850 H21 A1AZE 54 A1AZE H22 H22 H 0 1 N N N N N N -16.436 -0.163 -40.700 -9.694 -3.793 -0.177 H22 A1AZE 55 A1AZE H23 H23 H 0 1 N N N N N N -15.619 -2.364 -40.973 -9.039 -1.190 -0.880 H23 A1AZE 56 A1AZE H24 H24 H 0 1 N N N N N N -14.059 -1.618 -40.488 -8.728 -1.869 0.747 H24 A1AZE 57 A1AZE H25 H25 H 0 1 N N N N N N -6.658 -7.991 -37.945 1.765 3.097 -0.873 H25 A1AZE 58 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AZE C33 C32 SING N N 1 A1AZE C33 N29 SING N N 2 A1AZE C32 C31 SING N N 3 A1AZE CL20 C11 SING N N 4 A1AZE C14 C15 SING Y N 5 A1AZE C14 C13 DOUB Y N 6 A1AZE C15 C16 DOUB Y N 7 A1AZE C11 C10 DOUB Y N 8 A1AZE C11 C12 SING Y N 9 A1AZE C10 N09 SING Y N 10 A1AZE N29 C30 SING N N 11 A1AZE N29 C26 SING N N 12 A1AZE C13 C12 SING N N 13 A1AZE C13 S17 SING Y N 14 A1AZE C16 CL18 SING N N 15 A1AZE C16 S17 SING Y N 16 A1AZE C12 N19 DOUB Y N 17 A1AZE C31 C30 SING N N 18 A1AZE N09 C08 DOUB Y N 19 A1AZE C27 C26 SING N N 20 A1AZE C27 C28 SING N N 21 A1AZE N19 C08 SING Y N 22 A1AZE C08 N07 SING N N 23 A1AZE C26 C25 SING N N 24 A1AZE N07 C06 SING N N 25 A1AZE C28 N23 SING N N 26 A1AZE C06 C05 DOUB Y N 27 A1AZE C06 C21 SING Y N 28 A1AZE C05 C04 SING Y N 29 A1AZE C21 C22 DOUB Y N 30 A1AZE C04 C03 DOUB Y N 31 A1AZE C25 C24 SING N N 32 A1AZE C22 C03 SING Y N 33 A1AZE N23 C24 SING N N 34 A1AZE N23 C02 SING N N 35 A1AZE C03 C02 SING N N 36 A1AZE C02 O01 DOUB N N 37 A1AZE C10 H1 SING N N 38 A1AZE C14 H2 SING N N 39 A1AZE C15 H3 SING N N 40 A1AZE C04 H4 SING N N 41 A1AZE C05 H5 SING N N 42 A1AZE C21 H6 SING N N 43 A1AZE C22 H7 SING N N 44 A1AZE C24 H8 SING N N 45 A1AZE C24 H9 SING N N 46 A1AZE C25 H10 SING N N 47 A1AZE C25 H11 SING N N 48 A1AZE C26 H12 SING N N 49 A1AZE C27 H13 SING N N 50 A1AZE C27 H14 SING N N 51 A1AZE C28 H15 SING N N 52 A1AZE C28 H16 SING N N 53 A1AZE C30 H17 SING N N 54 A1AZE C30 H18 SING N N 55 A1AZE C31 H19 SING N N 56 A1AZE C31 H20 SING N N 57 A1AZE C32 H21 SING N N 58 A1AZE C32 H22 SING N N 59 A1AZE C33 H23 SING N N 60 A1AZE C33 H24 SING N N 61 A1AZE N07 H25 SING N N 62 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AZE SMILES ACDLabs 12.01 "Clc1ccc(s1)c1nc(Nc2ccc(cc2)C(=O)N2CCC(CC2)N2CCCC2)ncc1Cl" A1AZE InChI InChI 1.06 "InChI=1S/C24H25Cl2N5OS/c25-19-15-27-24(29-22(19)20-7-8-21(26)33-20)28-17-5-3-16(4-6-17)23(32)31-13-9-18(10-14-31)30-11-1-2-12-30/h3-8,15,18H,1-2,9-14H2,(H,27,28,29)" A1AZE InChIKey InChI 1.06 SZKUPGRFEZHAPU-UHFFFAOYSA-N A1AZE SMILES_CANONICAL CACTVS 3.385 "Clc1sc(cc1)c2nc(Nc3ccc(cc3)C(=O)N4CCC(CC4)N5CCCC5)ncc2Cl" A1AZE SMILES CACTVS 3.385 "Clc1sc(cc1)c2nc(Nc3ccc(cc3)C(=O)N4CCC(CC4)N5CCCC5)ncc2Cl" A1AZE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C(=O)N2CCC(CC2)N3CCCC3)Nc4ncc(c(n4)c5ccc(s5)Cl)Cl" A1AZE SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C(=O)N2CCC(CC2)N3CCCC3)Nc4ncc(c(n4)c5ccc(s5)Cl)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AZE "SYSTEMATIC NAME" ACDLabs 12.01 "(4-{[5-chloro-4-(5-chlorothiophen-2-yl)pyrimidin-2-yl]amino}phenyl)[4-(pyrrolidin-1-yl)piperidin-1-yl]methanone" A1AZE "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[4-[[5-chloranyl-4-(5-chloranylthiophen-2-yl)pyrimidin-2-yl]amino]phenyl]-(4-pyrrolidin-1-ylpiperidin-1-yl)methanone" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AZE "Create component" 2024-07-16 RCSB A1AZE "Initial release" 2024-07-24 RCSB #