data_A1B0A # _chem_comp.id A1B0A _chem_comp.name "5-{2-[4-({[3-chloro-4-(trifluoromethoxy)phenyl]methyl}amino)butoxy]ethoxy}benzo[c][2,6]naphthyridine-8-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H25 Cl F3 N3 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-12 _chem_comp.pdbx_modified_date 2026-01-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 563.953 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B0A _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I8D _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B0A C26 C1 C 0 1 N N N N N N 9.249 5.765 19.250 -11.126 -1.196 0.019 C26 A1B0A 1 A1B0A C25 C2 C 0 1 Y N N N N N 5.701 5.603 16.506 -7.076 1.279 -0.507 C25 A1B0A 2 A1B0A C24 C3 C 0 1 Y N N N N N 7.031 5.418 16.875 -8.401 1.251 -0.111 C24 A1B0A 3 A1B0A C23 C4 C 0 1 Y N N N N N 7.725 6.424 17.530 -9.133 0.077 -0.225 C23 A1B0A 4 A1B0A C22 C5 C 0 1 Y N N N N N 7.159 7.671 17.784 -8.533 -1.065 -0.735 C22 A1B0A 5 A1B0A C21 C6 C 0 1 Y N N N N N 5.846 7.880 17.395 -7.209 -1.031 -1.129 C21 A1B0A 6 A1B0A C18 C7 C 0 1 N N N N N N 1.651 6.569 15.399 -2.761 -0.162 -0.692 C18 A1B0A 7 A1B0A C17 C8 C 0 1 N N N N N N 0.934 5.600 14.484 -1.901 -0.538 0.516 C17 A1B0A 8 A1B0A C16 C9 C 0 1 N N N N N N -0.570 5.989 14.492 -0.424 -0.515 0.117 C16 A1B0A 9 A1B0A C15 C10 C 0 1 N N N N N N -1.393 4.967 13.691 0.437 -0.890 1.325 C15 A1B0A 10 A1B0A C14 C11 C 0 1 N N N N N N -3.547 4.120 13.337 2.711 -1.207 2.014 C14 A1B0A 11 A1B0A C1 C12 C 0 1 Y N N N N N -5.438 -1.286 16.199 9.958 -1.423 -0.465 C1 A1B0A 12 A1B0A N1 N1 N 0 1 Y N N N N N -6.210 4.051 19.880 6.969 4.260 -0.456 N1 A1B0A 13 A1B0A C6 C13 C 0 1 Y N N N N N -5.391 -0.182 15.362 8.662 -1.568 0.012 C6 A1B0A 14 A1B0A C5 C14 C 0 1 Y N N N N N -5.551 1.064 15.994 7.824 -0.448 0.101 C5 A1B0A 15 A1B0A C12 C15 C 0 1 Y N N N N N -5.899 2.543 17.979 7.437 1.977 -0.204 C12 A1B0A 16 A1B0A C3 C16 C 0 1 Y N N N N N -5.828 0.070 18.205 9.629 0.933 -0.778 C3 A1B0A 17 A1B0A C8 C17 C 0 1 Y N N N N N -5.782 3.659 17.094 6.127 1.767 0.289 C8 A1B0A 18 A1B0A C9 C18 C 0 1 Y N N N N N -5.894 4.981 17.624 5.272 2.868 0.387 C9 A1B0A 19 A1B0A C11 C19 C 0 1 Y N N N N N -6.121 2.779 19.392 7.823 3.264 -0.572 C11 A1B0A 20 A1B0A F2 F1 F 0 1 N N N N N N 8.921 6.733 20.088 -12.444 -1.050 0.464 F2 A1B0A 21 A1B0A F F2 F 0 1 N N N N N N 10.523 5.459 19.486 -10.483 -2.179 0.779 F A1B0A 22 A1B0A F1 F3 F 0 1 N N N N N N 8.505 4.691 19.525 -11.127 -1.574 -1.328 F1 A1B0A 23 A1B0A O4 O1 O 0 1 N N N N N N 9.016 6.173 17.931 -10.435 0.047 0.164 O4 A1B0A 24 A1B0A CL CL1 CL 0 0 N N N N N N 7.858 4.022 16.426 -9.147 2.682 0.528 CL A1B0A 25 A1B0A C20 C20 C 0 1 Y N N N N N 5.121 6.853 16.788 -6.482 0.139 -1.015 C20 A1B0A 26 A1B0A C19 C21 C 0 1 N N N N N N 3.682 7.135 16.535 -5.038 0.172 -1.446 C19 A1B0A 27 A1B0A N2 N2 N 0 1 N N N N N N 3.101 6.222 15.505 -4.179 -0.184 -0.308 N2 A1B0A 28 A1B0A O3 O2 O 0 1 N N N N N N -2.818 5.225 13.888 1.816 -0.869 0.952 O3 A1B0A 29 A1B0A C13 C22 C 0 1 N N N N N N -5.102 4.365 13.487 4.152 -1.152 1.504 C13 A1B0A 30 A1B0A O2 O3 O 0 1 N N N N N N -5.388 4.481 14.869 4.480 0.192 1.147 O2 A1B0A 31 A1B0A C7 C23 C 0 1 Y N N N N N -5.520 3.366 15.678 5.729 0.414 0.673 C7 A1B0A 32 A1B0A C10 C24 C 0 1 Y N N N N N -6.101 5.103 19.006 5.739 4.095 0.002 C10 A1B0A 33 A1B0A C4 C25 C 0 1 Y N N N N N -5.773 1.204 17.403 8.322 0.813 -0.301 C4 A1B0A 34 A1B0A C2 C26 C 0 1 Y N N N N N -5.671 -1.186 17.599 10.433 -0.164 -0.860 C2 A1B0A 35 A1B0A N N3 N 0 1 Y N N N N N -5.422 2.165 15.122 6.568 -0.584 0.562 N A1B0A 36 A1B0A C C27 C 0 1 N N N N N N -5.157 -2.588 15.582 10.843 -2.602 -0.553 C A1B0A 37 A1B0A O1 O4 O 0 1 N N N N N N -5.244 -2.820 14.385 10.436 -3.695 -0.213 O1 A1B0A 38 A1B0A O O5 O 0 1 N N N N N N -4.763 -3.565 16.372 12.103 -2.466 -1.011 O A1B0A 39 A1B0A H1 H1 H 0 1 N N N N N N 5.138 4.818 16.023 -6.507 2.193 -0.423 H1 A1B0A 40 A1B0A H2 H2 H 0 1 N N N N N N 7.726 8.451 18.269 -9.100 -1.979 -0.823 H2 A1B0A 41 A1B0A H3 H3 H 0 1 N N N N N N 5.382 8.841 17.562 -6.742 -1.920 -1.526 H3 A1B0A 42 A1B0A H4 H4 H 0 1 N N N N N N 1.552 7.587 14.995 -2.493 0.838 -1.033 H4 A1B0A 43 A1B0A H5 H5 H 0 1 N N N N N N 1.195 6.525 16.399 -2.591 -0.878 -1.495 H5 A1B0A 44 A1B0A H6 H6 H 0 1 N N N N N N 1.059 4.571 14.852 -2.071 0.179 1.320 H6 A1B0A 45 A1B0A H7 H7 H 0 1 N N N N N N 1.338 5.676 13.464 -2.170 -1.537 0.858 H7 A1B0A 46 A1B0A H8 H8 H 0 1 N N N N N N -0.689 6.985 14.040 -0.254 -1.231 -0.687 H8 A1B0A 47 A1B0A H9 H9 H 0 1 N N N N N N -0.933 6.012 15.530 -0.155 0.485 -0.224 H9 A1B0A 48 A1B0A H10 H10 H 0 1 N N N N N N -1.153 3.951 14.038 0.267 -0.174 2.129 H10 A1B0A 49 A1B0A H11 H11 H 0 1 N N N N N N -1.149 5.057 12.622 0.168 -1.890 1.666 H11 A1B0A 50 A1B0A H12 H12 H 0 1 N N N N N N -3.271 3.199 13.872 2.588 -0.497 2.832 H12 A1B0A 51 A1B0A H13 H13 H 0 1 N N N N N N -3.297 4.014 12.271 2.489 -2.213 2.370 H13 A1B0A 52 A1B0A H14 H14 H 0 1 N N N N N N -5.242 -0.273 14.296 8.301 -2.540 0.313 H14 A1B0A 53 A1B0A H15 H15 H 0 1 N N N N N N -5.988 0.154 19.270 10.004 1.899 -1.084 H15 A1B0A 54 A1B0A H16 H16 H 0 1 N N N N N N -5.822 5.850 16.987 4.264 2.753 0.758 H16 A1B0A 55 A1B0A H17 H17 H 0 1 N N N N N N -6.217 1.940 20.065 8.818 3.444 -0.951 H17 A1B0A 56 A1B0A H18 H18 H 0 1 N N N N N N 3.580 8.173 16.186 -4.884 -0.541 -2.255 H18 A1B0A 57 A1B0A H19 H19 H 0 1 N N N N N N 3.125 7.008 17.475 -4.785 1.174 -1.792 H19 A1B0A 58 A1B0A H20 H20 H 0 1 N N N N N N 3.208 5.269 15.788 -4.437 -1.082 0.072 H20 A1B0A 59 A1B0A H22 H22 H 0 1 N N N N N N -5.387 5.291 12.966 4.828 -1.495 2.287 H22 A1B0A 60 A1B0A H23 H23 H 0 1 N N N N N N -5.658 3.518 13.059 4.252 -1.796 0.630 H23 A1B0A 61 A1B0A H24 H24 H 0 1 N N N N N N -6.181 6.100 19.413 5.086 4.952 0.074 H24 A1B0A 62 A1B0A H25 H25 H 0 1 N N N N N N -5.727 -2.082 18.199 11.443 -0.064 -1.229 H25 A1B0A 63 A1B0A H26 H26 H 0 1 N N N N N N -4.598 -4.344 15.854 12.645 -3.266 -1.050 H26 A1B0A 64 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B0A C14 C13 SING N N 1 A1B0A C14 O3 SING N N 2 A1B0A C13 O2 SING N N 3 A1B0A C15 O3 SING N N 4 A1B0A C15 C16 SING N N 5 A1B0A O1 C DOUB N N 6 A1B0A C17 C16 SING N N 7 A1B0A C17 C18 SING N N 8 A1B0A O2 C7 SING N N 9 A1B0A N C7 DOUB Y N 10 A1B0A N C5 SING Y N 11 A1B0A C6 C5 DOUB Y N 12 A1B0A C6 C1 SING Y N 13 A1B0A C18 N2 SING N N 14 A1B0A N2 C19 SING N N 15 A1B0A C C1 SING N N 16 A1B0A C O SING N N 17 A1B0A C7 C8 SING Y N 18 A1B0A C5 C4 SING Y N 19 A1B0A C1 C2 DOUB Y N 20 A1B0A CL C24 SING N N 21 A1B0A C25 C20 DOUB Y N 22 A1B0A C25 C24 SING Y N 23 A1B0A C19 C20 SING N N 24 A1B0A C20 C21 SING Y N 25 A1B0A C24 C23 DOUB Y N 26 A1B0A C8 C9 DOUB Y N 27 A1B0A C8 C12 SING Y N 28 A1B0A C21 C22 DOUB Y N 29 A1B0A C4 C12 SING Y N 30 A1B0A C4 C3 DOUB Y N 31 A1B0A C23 C22 SING Y N 32 A1B0A C23 O4 SING N N 33 A1B0A C2 C3 SING Y N 34 A1B0A C9 C10 SING Y N 35 A1B0A O4 C26 SING N N 36 A1B0A C12 C11 DOUB Y N 37 A1B0A C10 N1 DOUB Y N 38 A1B0A C26 F SING N N 39 A1B0A C26 F1 SING N N 40 A1B0A C26 F2 SING N N 41 A1B0A C11 N1 SING Y N 42 A1B0A C25 H1 SING N N 43 A1B0A C22 H2 SING N N 44 A1B0A C21 H3 SING N N 45 A1B0A C18 H4 SING N N 46 A1B0A C18 H5 SING N N 47 A1B0A C17 H6 SING N N 48 A1B0A C17 H7 SING N N 49 A1B0A C16 H8 SING N N 50 A1B0A C16 H9 SING N N 51 A1B0A C15 H10 SING N N 52 A1B0A C15 H11 SING N N 53 A1B0A C14 H12 SING N N 54 A1B0A C14 H13 SING N N 55 A1B0A C6 H14 SING N N 56 A1B0A C3 H15 SING N N 57 A1B0A C9 H16 SING N N 58 A1B0A C11 H17 SING N N 59 A1B0A C19 H18 SING N N 60 A1B0A C19 H19 SING N N 61 A1B0A N2 H20 SING N N 62 A1B0A C13 H22 SING N N 63 A1B0A C13 H23 SING N N 64 A1B0A C10 H24 SING N N 65 A1B0A C2 H25 SING N N 66 A1B0A O H26 SING N N 67 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B0A SMILES ACDLabs 14.52 "FC(F)(F)Oc1ccc(cc1Cl)CNCCCCOCCOc1nc2cc(ccc2c2cnccc12)C(=O)O" A1B0A InChI InChI 1.06 "InChI=1S/C27H25ClF3N3O5/c28-22-13-17(3-6-24(22)39-27(29,30)31)15-32-8-1-2-10-37-11-12-38-25-20-7-9-33-16-21(20)19-5-4-18(26(35)36)14-23(19)34-25/h3-7,9,13-14,16,32H,1-2,8,10-12,15H2,(H,35,36)" A1B0A InChIKey InChI 1.06 ZXBOCEMSOANKPH-UHFFFAOYSA-N A1B0A SMILES_CANONICAL CACTVS 3.385 "OC(=O)c1ccc2c(c1)nc(OCCOCCCCNCc3ccc(OC(F)(F)F)c(Cl)c3)c4ccncc24" A1B0A SMILES CACTVS 3.385 "OC(=O)c1ccc2c(c1)nc(OCCOCCCCNCc3ccc(OC(F)(F)F)c(Cl)c3)c4ccncc24" A1B0A SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(c(cc1CNCCCCOCCOc2c3ccncc3c4ccc(cc4n2)C(=O)O)Cl)OC(F)(F)F" A1B0A SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(c(cc1CNCCCCOCCOc2c3ccncc3c4ccc(cc4n2)C(=O)O)Cl)OC(F)(F)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B0A "SYSTEMATIC NAME" ACDLabs 14.52 "5-{2-[4-({[3-chloro-4-(trifluoromethoxy)phenyl]methyl}amino)butoxy]ethoxy}benzo[c][2,6]naphthyridine-8-carboxylic acid" A1B0A "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "5-[2-[4-[[3-chloranyl-4-(trifluoromethyloxy)phenyl]methylamino]butoxy]ethoxy]benzo[c][2,6]naphthyridine-8-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B0A "Create component" 2025-03-12 RCSB A1B0A "Initial release" 2026-01-14 RCSB #