data_A1B0G # _chem_comp.id A1B0G _chem_comp.name "5-{[2-(4-{[(3-chloro-4-cyclopropylphenyl)methyl]amino}butoxy)ethyl]amino}benzo[c][2,6]naphthyridine-8-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H32 Cl N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-12 _chem_comp.pdbx_modified_date 2026-01-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 518.050 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B0G _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I8B _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B0G C1 C1 C 0 1 Y N N N N N -5.455 -0.662 16.240 -9.149 1.190 -0.488 C1 A1B0G 1 A1B0G C3 C2 C 0 1 Y N N N N N -5.749 0.715 18.235 -8.667 -1.148 -0.732 C3 A1B0G 2 A1B0G N4 N1 N 0 1 N N N N N N 3.170 6.744 15.451 5.095 0.523 -0.378 N4 A1B0G 3 A1B0G C4 C3 C 0 1 Y N N N N N -5.641 1.872 17.425 -7.370 -0.928 -0.263 C4 A1B0G 4 A1B0G N3 N2 N 0 1 N N N N N N -5.246 5.165 14.822 -3.549 -0.008 1.165 N3 A1B0G 5 A1B0G C2 C4 C 0 1 Y N N N N N -5.653 -0.532 17.647 -9.541 -0.108 -0.843 C2 A1B0G 6 A1B0G N2 N3 N 0 1 Y N N N N N -6.032 4.742 19.853 -5.796 -4.282 -0.321 N2 A1B0G 7 A1B0G N1 N4 N 0 1 Y N N N N N -5.338 2.827 15.140 -5.711 0.607 0.554 N1 A1B0G 8 A1B0G C8 C5 C 0 1 Y N N N N N -5.611 4.341 17.084 -5.117 -1.720 0.349 C8 A1B0G 9 A1B0G C5 C6 C 0 1 Y N N N N N -5.467 1.731 16.014 -6.956 0.375 0.101 C5 A1B0G 10 A1B0G C6 C7 C 0 1 Y N N N N N -5.401 0.443 15.424 -7.866 1.434 -0.019 C6 A1B0G 11 A1B0G CL CL1 CL 0 0 N N N N N N 7.829 4.526 16.630 10.120 -2.244 0.447 CL A1B0G 12 A1B0G C24 C8 C 0 1 Y N N N N N 7.064 5.999 17.059 9.343 -0.836 -0.208 C24 A1B0G 13 A1B0G C23 C9 C 0 1 Y N N N N N 7.791 6.941 17.785 10.054 0.341 -0.356 C23 A1B0G 14 A1B0G C26 C10 C 0 1 N N N N N N 9.138 6.578 18.322 11.503 0.402 0.052 C26 A1B0G 15 A1B0G C28 C11 C 0 1 N N N N N N 9.341 5.413 19.297 11.890 1.410 1.136 C28 A1B0G 16 A1B0G C27 C12 C 0 1 N N N N N N 9.513 6.829 19.771 12.289 1.661 -0.319 C27 A1B0G 17 A1B0G C22 C13 C 0 1 Y N N N N N 7.192 8.207 18.014 9.435 1.461 -0.878 C22 A1B0G 18 A1B0G C21 C14 C 0 1 Y N N N N N 5.878 8.455 17.548 8.106 1.405 -1.253 C21 A1B0G 19 A1B0G C25 C15 C 0 1 Y N N N N N 5.770 6.215 16.600 8.014 -0.894 -0.589 C25 A1B0G 20 A1B0G C20 C16 C 0 1 Y N N N N N 5.170 7.456 16.846 7.394 0.229 -1.106 C20 A1B0G 21 A1B0G C19 C17 C 0 1 N N N N N N 3.784 7.764 16.361 5.947 0.167 -1.520 C19 A1B0G 22 A1B0G C18 C18 C 0 1 N N N N N N 1.684 7.030 15.413 3.673 0.474 -0.746 C18 A1B0G 23 A1B0G C17 C19 C 0 1 N N N N N N 0.991 6.151 14.377 2.819 0.851 0.466 C17 A1B0G 24 A1B0G C16 C20 C 0 1 N N N N N N -0.504 6.514 14.241 1.339 0.799 0.083 C16 A1B0G 25 A1B0G C15 C21 C 0 1 N N N N N N -1.274 5.525 13.356 0.485 1.176 1.295 C15 A1B0G 26 A1B0G O1 O1 O 0 1 N N N N N N -2.663 5.744 13.588 -0.898 1.127 0.937 O1 A1B0G 27 A1B0G C14 C22 C 0 1 N N N N N N -3.461 4.683 13.094 -1.786 1.464 2.004 C14 A1B0G 28 A1B0G C13 C23 C 0 1 N N N N N N -4.975 5.032 13.361 -3.232 1.380 1.510 C13 A1B0G 29 A1B0G C7 C24 C 0 1 Y N N N N N -5.407 4.073 15.656 -4.807 -0.332 0.692 C7 A1B0G 30 A1B0G C12 C25 C 0 1 Y N N N N N -5.717 3.215 17.954 -6.411 -2.028 -0.134 C12 A1B0G 31 A1B0G C11 C26 C 0 1 Y N N N N N -5.927 3.483 19.363 -6.713 -3.347 -0.463 C11 A1B0G 32 A1B0G C10 C27 C 0 1 Y N N N N N -5.948 5.800 18.971 -4.579 -4.025 0.127 C10 A1B0G 33 A1B0G C9 C28 C 0 1 Y N N N N N -5.738 5.645 17.602 -4.192 -2.759 0.476 C9 A1B0G 34 A1B0G C C29 C 0 1 N N N N N N -5.145 -2.040 15.732 -10.107 2.309 -0.620 C A1B0G 35 A1B0G O O2 O 0 1 N N N N N N -4.634 -2.888 16.474 -9.771 3.436 -0.314 O A1B0G 36 A1B0G N N5 N 0 1 N N N N N N -5.399 -2.354 14.414 -11.353 2.078 -1.081 N A1B0G 37 A1B0G H1 H1 H 0 1 N N N N N N -5.905 0.806 19.300 -8.978 -2.145 -1.008 H1 A1B0G 38 A1B0G H2 H2 H 0 1 N N N N N N 3.334 5.823 15.805 5.342 1.431 -0.012 H2 A1B0G 39 A1B0G H4 H4 H 0 1 N N N N N N -4.483 5.690 15.198 -2.877 -0.700 1.269 H4 A1B0G 40 A1B0G H5 H5 H 0 1 N N N N N N -5.729 -1.418 18.260 -10.542 -0.285 -1.207 H5 A1B0G 41 A1B0G H6 H6 H 0 1 N N N N N N -5.310 0.332 14.354 -7.570 2.436 0.253 H6 A1B0G 42 A1B0G H7 H7 H 0 1 N N N N N N 9.966 6.715 17.611 12.037 -0.548 0.035 H7 A1B0G 43 A1B0G H8 H8 H 0 1 N N N N N N 8.477 4.821 19.634 11.096 2.029 1.554 H8 A1B0G 44 A1B0G H9 H9 H 0 1 N N N N N N 10.218 4.757 19.195 12.679 1.123 1.832 H9 A1B0G 45 A1B0G H10 H10 H 0 1 N N N N N N 10.516 7.205 20.019 13.340 1.540 -0.581 H10 A1B0G 46 A1B0G H11 H11 H 0 1 N N N N N N 8.776 7.269 20.459 11.758 2.445 -0.859 H11 A1B0G 47 A1B0G H12 H12 H 0 1 N N N N N N 7.735 8.977 18.541 9.990 2.380 -0.993 H12 A1B0G 48 A1B0G H13 H13 H 0 1 N N N N N N 5.415 9.414 17.731 7.622 2.281 -1.661 H13 A1B0G 49 A1B0G H14 H14 H 0 1 N N N N N N 5.239 5.442 16.065 7.458 -1.812 -0.474 H14 A1B0G 50 A1B0G H15 H15 H 0 1 N N N N N N 3.821 8.721 15.820 5.707 -0.844 -1.851 H15 A1B0G 51 A1B0G H16 H16 H 0 1 N N N N N N 3.133 7.866 17.242 5.772 0.867 -2.337 H16 A1B0G 52 A1B0G H17 H17 H 0 1 N N N N N N 1.526 8.087 15.153 3.483 1.176 -1.557 H17 A1B0G 53 A1B0G H18 H18 H 0 1 N N N N N N 1.252 6.828 16.404 3.417 -0.535 -1.071 H18 A1B0G 54 A1B0G H19 H19 H 0 1 N N N N N N 1.077 5.099 14.685 3.010 0.148 1.277 H19 A1B0G 55 A1B0G H20 H20 H 0 1 N N N N N N 1.483 6.290 13.403 3.075 1.859 0.791 H20 A1B0G 56 A1B0G H21 H21 H 0 1 N N N N N N -0.584 7.518 13.799 1.149 1.502 -0.728 H21 A1B0G 57 A1B0G H22 H22 H 0 1 N N N N N N -0.958 6.517 15.243 1.083 -0.210 -0.242 H22 A1B0G 58 A1B0G H23 H23 H 0 1 N N N N N N -1.006 4.492 13.623 0.675 0.473 2.106 H23 A1B0G 59 A1B0G H24 H24 H 0 1 N N N N N N -1.036 5.703 12.297 0.741 2.184 1.621 H24 A1B0G 60 A1B0G H25 H25 H 0 1 N N N N N N -3.198 3.749 13.612 -1.643 0.767 2.830 H25 A1B0G 61 A1B0G H26 H26 H 0 1 N N N N N N -3.292 4.563 12.014 -1.578 2.478 2.345 H26 A1B0G 62 A1B0G H27 H27 H 0 1 N N N N N N -5.218 5.982 12.863 -3.352 2.010 0.629 H27 A1B0G 63 A1B0G H28 H28 H 0 1 N N N N N N -5.606 4.230 12.950 -3.905 1.722 2.296 H28 A1B0G 64 A1B0G H29 H29 H 0 1 N N N N N N -6.002 2.650 20.046 -7.694 -3.603 -0.834 H29 A1B0G 65 A1B0G H30 H30 H 0 1 N N N N N N -6.050 6.801 19.362 -3.871 -4.835 0.222 H30 A1B0G 66 A1B0G H31 H31 H 0 1 N N N N N N -5.674 6.506 16.953 -3.194 -2.568 0.840 H31 A1B0G 67 A1B0G H32 H32 H 0 1 N N N N N N -5.170 -3.262 14.063 -11.620 1.178 -1.326 H32 A1B0G 68 A1B0G H33 H33 H 0 1 N N N N N N -5.812 -1.674 13.809 -11.981 2.812 -1.168 H33 A1B0G 69 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B0G C14 C13 SING N N 1 A1B0G C14 O1 SING N N 2 A1B0G C15 O1 SING N N 3 A1B0G C15 C16 SING N N 4 A1B0G C13 N3 SING N N 5 A1B0G C16 C17 SING N N 6 A1B0G C17 C18 SING N N 7 A1B0G N C SING N N 8 A1B0G N3 C7 SING N N 9 A1B0G N1 C7 DOUB Y N 10 A1B0G N1 C5 SING Y N 11 A1B0G C18 N4 SING N N 12 A1B0G C6 C5 DOUB Y N 13 A1B0G C6 C1 SING Y N 14 A1B0G N4 C19 SING N N 15 A1B0G C7 C8 SING Y N 16 A1B0G C C1 SING N N 17 A1B0G C O DOUB N N 18 A1B0G C5 C4 SING Y N 19 A1B0G C1 C2 DOUB Y N 20 A1B0G C19 C20 SING N N 21 A1B0G C25 C20 DOUB Y N 22 A1B0G C25 C24 SING Y N 23 A1B0G CL C24 SING N N 24 A1B0G C20 C21 SING Y N 25 A1B0G C24 C23 DOUB Y N 26 A1B0G C8 C9 DOUB Y N 27 A1B0G C8 C12 SING Y N 28 A1B0G C4 C12 SING Y N 29 A1B0G C4 C3 DOUB Y N 30 A1B0G C21 C22 DOUB Y N 31 A1B0G C9 C10 SING Y N 32 A1B0G C2 C3 SING Y N 33 A1B0G C23 C22 SING Y N 34 A1B0G C23 C26 SING N N 35 A1B0G C12 C11 DOUB Y N 36 A1B0G C26 C28 SING N N 37 A1B0G C26 C27 SING N N 38 A1B0G C10 N2 DOUB Y N 39 A1B0G C28 C27 SING N N 40 A1B0G C11 N2 SING Y N 41 A1B0G C3 H1 SING N N 42 A1B0G N4 H2 SING N N 43 A1B0G N3 H4 SING N N 44 A1B0G C2 H5 SING N N 45 A1B0G C6 H6 SING N N 46 A1B0G C26 H7 SING N N 47 A1B0G C28 H8 SING N N 48 A1B0G C28 H9 SING N N 49 A1B0G C27 H10 SING N N 50 A1B0G C27 H11 SING N N 51 A1B0G C22 H12 SING N N 52 A1B0G C21 H13 SING N N 53 A1B0G C25 H14 SING N N 54 A1B0G C19 H15 SING N N 55 A1B0G C19 H16 SING N N 56 A1B0G C18 H17 SING N N 57 A1B0G C18 H18 SING N N 58 A1B0G C17 H19 SING N N 59 A1B0G C17 H20 SING N N 60 A1B0G C16 H21 SING N N 61 A1B0G C16 H22 SING N N 62 A1B0G C15 H23 SING N N 63 A1B0G C15 H24 SING N N 64 A1B0G C14 H25 SING N N 65 A1B0G C14 H26 SING N N 66 A1B0G C13 H27 SING N N 67 A1B0G C13 H28 SING N N 68 A1B0G C11 H29 SING N N 69 A1B0G C10 H30 SING N N 70 A1B0G C9 H31 SING N N 71 A1B0G N H32 SING N N 72 A1B0G N H33 SING N N 73 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B0G SMILES ACDLabs 14.52 "NC(=O)c1cc2nc(NCCOCCCCNCc3ccc(C4CC4)c(Cl)c3)c3ccncc3c2cc1" A1B0G InChI InChI 1.06 "InChI=1S/C29H32ClN5O2/c30-26-15-19(3-7-22(26)20-4-5-20)17-32-10-1-2-13-37-14-12-34-29-24-9-11-33-18-25(24)23-8-6-21(28(31)36)16-27(23)35-29/h3,6-9,11,15-16,18,20,32H,1-2,4-5,10,12-14,17H2,(H2,31,36)(H,34,35)" A1B0G InChIKey InChI 1.06 VPCMAPSJWQZILZ-UHFFFAOYSA-N A1B0G SMILES_CANONICAL CACTVS 3.385 "NC(=O)c1ccc2c(c1)nc(NCCOCCCCNCc3ccc(C4CC4)c(Cl)c3)c5ccncc25" A1B0G SMILES CACTVS 3.385 "NC(=O)c1ccc2c(c1)nc(NCCOCCCCNCc3ccc(C4CC4)c(Cl)c3)c5ccncc25" A1B0G SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(c(cc1CNCCCCOCCNc2c3ccncc3c4ccc(cc4n2)C(=O)N)Cl)C5CC5" A1B0G SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(c(cc1CNCCCCOCCNc2c3ccncc3c4ccc(cc4n2)C(=O)N)Cl)C5CC5" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B0G "SYSTEMATIC NAME" ACDLabs 14.52 "5-{[2-(4-{[(3-chloro-4-cyclopropylphenyl)methyl]amino}butoxy)ethyl]amino}benzo[c][2,6]naphthyridine-8-carboxamide" A1B0G "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "5-[2-[4-[(3-chloranyl-4-cyclopropyl-phenyl)methylamino]butoxy]ethylamino]benzo[c][2,6]naphthyridine-8-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B0G "Create component" 2025-03-12 RCSB A1B0G "Initial release" 2026-01-14 RCSB #