data_A1B0I # _chem_comp.id A1B0I _chem_comp.name "5-{2-[4-({[3-methyl-4-(trifluoromethoxy)phenyl]methyl}amino)butoxy]ethoxy}-1,4-dihydrobenzo[c][2,6]naphthyridine-8-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H30 F3 N3 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-12 _chem_comp.pdbx_modified_date 2026-01-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 545.550 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B0I _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I8L _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B0I C22 C1 C 0 1 Y N N N N N -5.926 2.908 17.798 6.921 -1.997 0.105 C22 A1B0I 1 A1B0I O4 O1 O 0 1 N N N N N N -5.321 -2.452 14.279 10.312 3.394 0.179 O4 A1B0I 2 A1B0I C19 C2 C 0 1 Y N N N N N -5.762 -0.812 17.432 10.033 -0.137 0.776 C19 A1B0I 3 A1B0I C18 C3 C 0 1 Y N N N N N -5.509 -0.927 16.055 9.657 1.163 0.398 C18 A1B0I 4 A1B0I C21 C4 C 0 1 Y N N N N N -5.805 1.578 17.218 7.851 -0.941 0.210 C21 A1B0I 5 A1B0I C20 C5 C 0 1 Y N N N N N -5.917 0.457 18.010 9.153 -1.169 0.686 C20 A1B0I 6 A1B0I C23 C6 C 0 1 N N N N N N -6.155 3.118 19.200 7.319 -3.388 0.503 C23 A1B0I 7 A1B0I C17 C7 C 0 1 Y N N N N N -5.430 0.171 15.222 8.379 1.417 -0.074 C17 A1B0I 8 A1B0I C16 C8 C 0 1 Y N N N N N -5.574 1.439 15.834 7.457 0.364 -0.174 C16 A1B0I 9 A1B0I C14 C9 C 0 1 N N N N N N -5.129 4.748 13.382 3.812 1.218 -1.534 C14 A1B0I 10 A1B0I C12 C10 C 0 1 N N N N N N -1.477 5.199 13.540 0.093 1.084 -1.303 C12 A1B0I 11 A1B0I C9 C11 C 0 1 N N N N N N 1.584 6.870 15.129 -3.100 0.465 0.757 C9 A1B0I 12 A1B0I C15 C12 C 0 1 Y N N N N N -5.594 3.735 15.535 5.347 -0.403 -0.725 C15 A1B0I 13 A1B0I O3 O2 O 0 1 N N N N N N -4.766 -3.181 16.265 11.875 2.027 0.963 O3 A1B0I 14 A1B0I N2 N1 N 0 1 N N N N N N -6.307 4.394 19.693 6.161 -4.223 0.778 N2 A1B0I 15 A1B0I C13 C13 C 0 1 N N N N N N -3.622 4.428 13.167 2.367 1.323 -2.024 C13 A1B0I 16 A1B0I C11 C14 C 0 1 N N N N N N -0.680 6.272 14.284 -0.763 0.738 -0.084 C11 A1B0I 17 A1B0I C10 C15 C 0 1 N N N N N N 0.809 5.827 14.328 -2.244 0.812 -0.462 C10 A1B0I 18 A1B0I C8 C16 C 0 1 N N N N N N 3.616 7.540 16.116 -5.376 0.209 1.543 C8 A1B0I 19 A1B0I O1 O3 O 0 1 N N N N N N -2.866 5.544 13.659 1.476 1.015 -0.950 O1 A1B0I 20 A1B0I O2 O4 O 0 1 N N N N N N -5.468 4.870 14.743 4.099 -0.137 -1.182 O2 A1B0I 21 A1B0I N1 N2 N 0 1 Y N N N N N -5.477 2.546 14.956 6.215 0.578 -0.626 N1 A1B0I 22 A1B0I C7 C17 C 0 1 N N N N N N 9.127 6.162 19.218 -11.387 -0.674 -0.495 C7 A1B0I 23 A1B0I C3 C18 C 0 1 Y N N N N N 5.029 7.246 16.526 -6.824 0.292 1.133 C3 A1B0I 24 A1B0I C1 C19 C 0 1 Y N N N N N 6.916 5.755 16.757 -8.834 1.567 0.877 C1 A1B0I 25 A1B0I C2 C20 C 0 1 Y N N N N N 5.625 6.001 16.296 -7.507 1.488 1.253 C2 A1B0I 26 A1B0I C4 C21 C 0 1 Y N N N N N 5.717 8.250 17.204 -7.464 -0.826 0.632 C4 A1B0I 27 A1B0I C5 C22 C 0 1 Y N N N N N 7.014 8.038 17.670 -8.791 -0.752 0.255 C5 A1B0I 28 A1B0I C6 C23 C 0 1 Y N N N N N 7.602 6.786 17.448 -9.481 0.445 0.380 C6 A1B0I 29 A1B0I C24 C24 C 0 1 N N N N N N -6.218 5.453 18.820 4.995 -3.987 0.354 C24 A1B0I 30 A1B0I C27 C25 C 0 1 N N N N N N -5.187 -2.260 15.571 10.632 2.268 0.504 C27 A1B0I 31 A1B0I C26 C26 C 0 1 Y N N N N N -5.829 4.012 16.944 5.678 -1.720 -0.366 C26 A1B0I 32 A1B0I C25 C27 C 0 1 N N N N N N -5.970 5.333 17.454 4.643 -2.804 -0.496 C25 A1B0I 33 A1B0I N N3 N 0 1 N N N N N N 3.025 6.537 15.182 -4.522 0.536 0.394 N A1B0I 34 A1B0I C C28 C 0 1 N N N N N N 7.521 4.455 16.479 -9.581 2.869 1.014 C A1B0I 35 A1B0I O O5 O 0 1 N N N N N N 8.911 6.579 17.897 -10.786 0.520 0.009 O A1B0I 36 A1B0I F F1 F 0 1 N N N N N N 10.394 5.843 19.454 -11.331 -1.673 0.483 F A1B0I 37 A1B0I F1 F2 F 0 1 N N N N N N 8.381 5.075 19.467 -12.723 -0.421 -0.825 F1 A1B0I 38 A1B0I F2 F3 F 0 1 N N N N N N 8.805 7.091 20.091 -10.697 -1.098 -1.635 F2 A1B0I 39 A1B0I H1 H1 H 0 1 N N N N N N -5.837 -1.698 18.044 11.033 -0.318 1.143 H1 A1B0I 40 A1B0I H2 H2 H 0 1 N N N N N N -6.122 0.554 19.066 9.455 -2.163 0.980 H2 A1B0I 41 A1B0I H3 H3 H 0 1 N N N N N N -7.072 2.568 19.457 7.897 -3.837 -0.304 H3 A1B0I 42 A1B0I H4 H4 H 0 1 N N N N N N -5.300 2.673 19.731 7.940 -3.337 1.397 H4 A1B0I 43 A1B0I H5 H5 H 0 1 N N N N N N -5.267 0.068 14.159 8.095 2.418 -0.363 H5 A1B0I 44 A1B0I H6 H6 H 0 1 N N N N N N -5.364 5.695 12.874 4.489 1.539 -2.326 H6 A1B0I 45 A1B0I H7 H7 H 0 1 N N N N N N -5.728 3.937 12.941 3.947 1.857 -0.661 H7 A1B0I 46 A1B0I H8 H8 H 0 1 N N N N N N -1.294 4.213 13.991 -0.113 0.375 -2.105 H8 A1B0I 47 A1B0I H9 H9 H 0 1 N N N N N N -1.183 5.178 12.480 -0.146 2.093 -1.640 H9 A1B0I 48 A1B0I H10 H10 H 0 1 N N N N N N 1.460 7.854 14.653 -2.861 -0.543 1.094 H10 A1B0I 49 A1B0I H11 H11 H 0 1 N N N N N N 1.185 6.905 16.154 -2.894 1.174 1.559 H11 A1B0I 50 A1B0I H12 H12 H 0 1 N N N N N N -4.593 -3.937 15.717 12.478 2.782 1.015 H12 A1B0I 51 A1B0I H13 H13 H 0 1 N N N N N N -3.349 3.517 13.720 2.175 2.337 -2.376 H13 A1B0I 52 A1B0I H14 H14 H 0 1 N N N N N N -3.419 4.281 12.096 2.208 0.619 -2.841 H14 A1B0I 53 A1B0I H15 H15 H 0 1 N N N N N N -0.766 7.233 13.756 -0.524 -0.271 0.253 H15 A1B0I 54 A1B0I H16 H16 H 0 1 N N N N N N -1.067 6.380 15.308 -0.557 1.447 0.718 H16 A1B0I 55 A1B0I H17 H17 H 0 1 N N N N N N 0.892 4.844 14.815 -2.450 0.103 -1.264 H17 A1B0I 56 A1B0I H18 H18 H 0 1 N N N N N N 1.211 5.765 13.306 -2.483 1.821 -0.799 H18 A1B0I 57 A1B0I H19 H19 H 0 1 N N N N N N 3.598 8.523 15.622 -5.186 0.916 2.351 H19 A1B0I 58 A1B0I H20 H20 H 0 1 N N N N N N 2.994 7.574 17.023 -5.153 -0.802 1.886 H20 A1B0I 59 A1B0I H21 H21 H 0 1 N N N N N N 5.085 5.233 15.762 -7.003 2.361 1.640 H21 A1B0I 60 A1B0I H22 H22 H 0 1 N N N N N N 5.240 9.204 17.371 -6.927 -1.758 0.535 H22 A1B0I 61 A1B0I H23 H23 H 0 1 N N N N N N 7.551 8.818 18.188 -9.291 -1.626 -0.137 H23 A1B0I 62 A1B0I H24 H24 H 0 1 N N N N N N -6.350 6.447 19.221 4.208 -4.677 0.618 H24 A1B0I 63 A1B0I H25 H25 H 0 1 N N N N N N -5.039 5.876 17.235 4.579 -3.115 -1.538 H25 A1B0I 64 A1B0I H26 H26 H 0 1 N N N N N N -6.806 5.809 16.920 3.676 -2.415 -0.179 H26 A1B0I 65 A1B0I H27 H27 H 0 1 N N N N N N 3.159 5.609 15.531 -4.754 1.443 0.018 H27 A1B0I 66 A1B0I H29 H29 H 0 1 N N N N N N 8.050 4.495 15.515 -10.041 2.921 2.001 H29 A1B0I 67 A1B0I H30 H30 H 0 1 N N N N N N 8.234 4.204 17.278 -8.886 3.700 0.893 H30 A1B0I 68 A1B0I H31 H31 H 0 1 N N N N N N 6.735 3.687 16.435 -10.354 2.926 0.249 H31 A1B0I 69 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B0I C13 C14 SING N N 1 A1B0I C13 O1 SING N N 2 A1B0I C14 O2 SING N N 3 A1B0I C12 O1 SING N N 4 A1B0I C12 C11 SING N N 5 A1B0I O4 C27 DOUB N N 6 A1B0I C11 C10 SING N N 7 A1B0I C10 C9 SING N N 8 A1B0I O2 C15 SING N N 9 A1B0I N1 C15 DOUB Y N 10 A1B0I N1 C16 SING Y N 11 A1B0I C9 N SING N N 12 A1B0I N C8 SING N N 13 A1B0I C17 C16 DOUB Y N 14 A1B0I C17 C18 SING Y N 15 A1B0I C15 C26 SING Y N 16 A1B0I C27 C18 SING N N 17 A1B0I C27 O3 SING N N 18 A1B0I C16 C21 SING Y N 19 A1B0I C18 C19 DOUB Y N 20 A1B0I C8 C3 SING N N 21 A1B0I C2 C3 DOUB Y N 22 A1B0I C2 C1 SING Y N 23 A1B0I C C1 SING N N 24 A1B0I C3 C4 SING Y N 25 A1B0I C1 C6 DOUB Y N 26 A1B0I C26 C25 SING N N 27 A1B0I C26 C22 DOUB Y N 28 A1B0I C4 C5 DOUB Y N 29 A1B0I C21 C22 SING Y N 30 A1B0I C21 C20 DOUB Y N 31 A1B0I C19 C20 SING Y N 32 A1B0I C6 C5 SING Y N 33 A1B0I C6 O SING N N 34 A1B0I C25 C24 SING N N 35 A1B0I C22 C23 SING N N 36 A1B0I O C7 SING N N 37 A1B0I C24 N2 DOUB N N 38 A1B0I C23 N2 SING N N 39 A1B0I C7 F SING N N 40 A1B0I C7 F1 SING N N 41 A1B0I C7 F2 SING N N 42 A1B0I C19 H1 SING N N 43 A1B0I C20 H2 SING N N 44 A1B0I C23 H3 SING N N 45 A1B0I C23 H4 SING N N 46 A1B0I C17 H5 SING N N 47 A1B0I C14 H6 SING N N 48 A1B0I C14 H7 SING N N 49 A1B0I C12 H8 SING N N 50 A1B0I C12 H9 SING N N 51 A1B0I C9 H10 SING N N 52 A1B0I C9 H11 SING N N 53 A1B0I O3 H12 SING N N 54 A1B0I C13 H13 SING N N 55 A1B0I C13 H14 SING N N 56 A1B0I C11 H15 SING N N 57 A1B0I C11 H16 SING N N 58 A1B0I C10 H17 SING N N 59 A1B0I C10 H18 SING N N 60 A1B0I C8 H19 SING N N 61 A1B0I C8 H20 SING N N 62 A1B0I C2 H21 SING N N 63 A1B0I C4 H22 SING N N 64 A1B0I C5 H23 SING N N 65 A1B0I C24 H24 SING N N 66 A1B0I C25 H25 SING N N 67 A1B0I C25 H26 SING N N 68 A1B0I N H27 SING N N 69 A1B0I C H29 SING N N 70 A1B0I C H30 SING N N 71 A1B0I C H31 SING N N 72 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B0I SMILES ACDLabs 14.52 "FC(F)(F)Oc1ccc(cc1C)CNCCCCOCCOc1nc2cc(ccc2c2CN=CCc21)C(=O)O" A1B0I InChI InChI 1.06 "InChI=1S/C28H30F3N3O5/c1-18-14-19(4-7-25(18)39-28(29,30)31)16-32-9-2-3-11-37-12-13-38-26-22-8-10-33-17-23(22)21-6-5-20(27(35)36)15-24(21)34-26/h4-7,10,14-15,32H,2-3,8-9,11-13,16-17H2,1H3,(H,35,36)" A1B0I InChIKey InChI 1.06 BZUWWUCGXQJCJE-UHFFFAOYSA-N A1B0I SMILES_CANONICAL CACTVS 3.385 "Cc1cc(CNCCCCOCCOc2nc3cc(ccc3c4CN=CCc24)C(O)=O)ccc1OC(F)(F)F" A1B0I SMILES CACTVS 3.385 "Cc1cc(CNCCCCOCCOc2nc3cc(ccc3c4CN=CCc24)C(O)=O)ccc1OC(F)(F)F" A1B0I SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1cc(ccc1OC(F)(F)F)CNCCCCOCCOc2c3c(c4ccc(cc4n2)C(=O)O)CN=CC3" A1B0I SMILES "OpenEye OEToolkits" 3.1.0.0 "Cc1cc(ccc1OC(F)(F)F)CNCCCCOCCOc2c3c(c4ccc(cc4n2)C(=O)O)CN=CC3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B0I "SYSTEMATIC NAME" ACDLabs 14.52 "5-{2-[4-({[3-methyl-4-(trifluoromethoxy)phenyl]methyl}amino)butoxy]ethoxy}-1,4-dihydrobenzo[c][2,6]naphthyridine-8-carboxylic acid" A1B0I "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "5-[2-[4-[[3-methyl-4-(trifluoromethyloxy)phenyl]methylamino]butoxy]ethoxy]-1,4-dihydrobenzo[c][2,6]naphthyridine-8-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B0I "Create component" 2025-03-12 RCSB A1B0I "Initial release" 2026-01-14 RCSB #