data_A1B0J # _chem_comp.id A1B0J _chem_comp.name "5-[(2-formamidoethyl)amino]benzo[c][2,6]naphthyridine-8-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H15 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-12 _chem_comp.pdbx_modified_date 2026-01-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 309.323 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B0J _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I88 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B0J O1 O1 O 0 1 N N N N N N -4.303 6.223 8.826 7.016 1.348 -0.002 O1 A1B0J 1 A1B0J C1 C1 C 0 1 Y N N N N N -5.136 -0.565 16.129 -3.376 1.433 0.004 C1 A1B0J 2 A1B0J C2 C2 C 0 1 Y N N N N N -5.351 -0.453 17.559 -4.010 0.183 0.003 C2 A1B0J 3 A1B0J C3 C3 C 0 1 Y N N N N N -5.467 0.806 18.141 -3.274 -0.965 0.002 C3 A1B0J 4 A1B0J C4 C4 C 0 1 Y N N N N N -5.390 1.984 17.330 -1.880 -0.904 0.001 C4 A1B0J 5 A1B0J C5 C5 C 0 1 Y N N N N N -5.201 1.855 15.917 -1.221 0.348 0.001 C5 A1B0J 6 A1B0J C6 C6 C 0 1 Y N N N N N -5.077 0.558 15.311 -1.991 1.519 0.003 C6 A1B0J 7 A1B0J C7 C7 C 0 1 Y N N N N N -5.229 4.198 15.549 0.906 -0.624 0.001 C7 A1B0J 8 A1B0J C8 C8 C 0 1 Y N N N N N -5.409 4.470 16.991 0.342 -1.973 -0.000 C8 A1B0J 9 A1B0J C9 C9 C 0 1 Y N N N N N -5.534 5.780 17.536 1.131 -3.126 -0.001 C9 A1B0J 10 A1B0J C10 C10 C 0 1 Y N N N N N -5.754 5.922 18.906 0.507 -4.345 -0.002 C10 A1B0J 11 A1B0J C11 C11 C 0 1 Y N N N N N -5.703 3.609 19.285 -1.609 -3.405 -0.001 C11 A1B0J 12 A1B0J C12 C12 C 0 1 Y N N N N N -5.494 3.337 17.867 -1.065 -2.123 0.000 C12 A1B0J 13 A1B0J C13 C13 C 0 1 N N N N N N -5.094 5.080 13.181 2.849 0.895 0.001 C13 A1B0J 14 A1B0J C14 C14 C 0 1 N N N N N N -4.203 6.158 12.491 4.376 0.802 -0.000 C14 A1B0J 15 A1B0J C15 C15 C 0 1 N N N N N N -4.205 6.642 9.987 6.285 2.316 -0.000 C15 A1B0J 16 A1B0J N4 N1 N 0 1 N N N N N N -4.076 5.767 11.069 4.948 2.151 0.001 N4 A1B0J 17 A1B0J N3 N2 N 0 1 N N N N N N -5.220 5.277 14.651 2.277 -0.454 -0.000 N3 A1B0J 18 A1B0J N2 N3 N 0 1 Y N N N N N -5.839 4.860 19.792 -0.810 -4.453 -0.001 N2 A1B0J 19 A1B0J N1 N4 N 0 1 Y N N N N N -5.119 2.944 15.041 0.122 0.427 0.002 N1 A1B0J 20 A1B0J C C16 C 0 1 N N N N N N -4.878 -1.909 15.563 -4.188 2.668 -0.001 C A1B0J 21 A1B0J O O2 O 0 1 N N N N N N -4.929 -2.187 14.365 -3.643 3.754 -0.001 O A1B0J 22 A1B0J N N5 N 0 1 N N N N N N -4.522 -2.849 16.460 -5.534 2.590 -0.006 N A1B0J 23 A1B0J H1 H1 H 0 1 N N N N N N -5.421 -1.342 18.169 -5.089 0.128 0.004 H1 A1B0J 24 A1B0J H2 H2 H 0 1 N N N N N N -5.615 0.895 19.207 -3.772 -1.923 0.002 H2 A1B0J 25 A1B0J H3 H3 H 0 1 N N N N N N -4.941 0.458 14.244 -1.508 2.485 0.003 H3 A1B0J 26 A1B0J H4 H4 H 0 1 N N N N N N -5.460 6.649 16.899 2.208 -3.057 -0.002 H4 A1B0J 27 A1B0J H5 H5 H 0 1 N N N N N N -5.865 6.921 19.301 1.108 -5.242 -0.003 H5 A1B0J 28 A1B0J H6 H6 H 0 1 N N N N N N -5.752 2.772 19.966 -2.680 -3.539 -0.000 H6 A1B0J 29 A1B0J H7 H7 H 0 1 N N N N N N -6.099 5.120 12.736 2.518 1.429 0.892 H7 A1B0J 30 A1B0J H8 H8 H 0 1 N N N N N N -4.650 4.090 12.998 2.517 1.431 -0.888 H8 A1B0J 31 A1B0J H9 H9 H 0 1 N N N N N N -3.211 6.188 12.965 4.708 0.266 0.889 H9 A1B0J 32 A1B0J H10 H10 H 0 1 N N N N N N -4.677 7.147 12.570 4.707 0.268 -0.891 H10 A1B0J 33 A1B0J H11 H11 H 0 1 N N N N N N -4.220 7.707 10.167 6.707 3.310 0.001 H11 A1B0J 34 A1B0J H12 H12 H 0 1 N N N N N N -3.884 4.806 10.868 4.363 2.925 0.002 H12 A1B0J 35 A1B0J H13 H13 H 0 1 N N N N N N -4.454 5.860 14.922 2.862 -1.229 -0.001 H13 A1B0J 36 A1B0J H14 H14 H 0 1 N N N N N N -4.299 -3.774 16.153 -5.969 1.723 -0.006 H14 A1B0J 37 A1B0J H15 H15 H 0 1 N N N N N N -4.481 -2.622 17.433 -6.067 3.401 -0.009 H15 A1B0J 38 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B0J O1 C15 DOUB N N 1 A1B0J C15 N4 SING N N 2 A1B0J N4 C14 SING N N 3 A1B0J C14 C13 SING N N 4 A1B0J C13 N3 SING N N 5 A1B0J O C DOUB N N 6 A1B0J N3 C7 SING N N 7 A1B0J N1 C7 DOUB Y N 8 A1B0J N1 C5 SING Y N 9 A1B0J C6 C5 DOUB Y N 10 A1B0J C6 C1 SING Y N 11 A1B0J C7 C8 SING Y N 12 A1B0J C C1 SING N N 13 A1B0J C N SING N N 14 A1B0J C5 C4 SING Y N 15 A1B0J C1 C2 DOUB Y N 16 A1B0J C8 C9 DOUB Y N 17 A1B0J C8 C12 SING Y N 18 A1B0J C4 C12 SING Y N 19 A1B0J C4 C3 DOUB Y N 20 A1B0J C9 C10 SING Y N 21 A1B0J C2 C3 SING Y N 22 A1B0J C12 C11 DOUB Y N 23 A1B0J C10 N2 DOUB Y N 24 A1B0J C11 N2 SING Y N 25 A1B0J C2 H1 SING N N 26 A1B0J C3 H2 SING N N 27 A1B0J C6 H3 SING N N 28 A1B0J C9 H4 SING N N 29 A1B0J C10 H5 SING N N 30 A1B0J C11 H6 SING N N 31 A1B0J C13 H7 SING N N 32 A1B0J C13 H8 SING N N 33 A1B0J C14 H9 SING N N 34 A1B0J C14 H10 SING N N 35 A1B0J C15 H11 SING N N 36 A1B0J N4 H12 SING N N 37 A1B0J N3 H13 SING N N 38 A1B0J N H14 SING N N 39 A1B0J N H15 SING N N 40 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B0J SMILES ACDLabs 14.52 "NC(=O)c1cc2nc(NCCNC=O)c3ccncc3c2cc1" A1B0J InChI InChI 1.06 "InChI=1S/C16H15N5O2/c17-15(23)10-1-2-11-13-8-18-4-3-12(13)16(21-14(11)7-10)20-6-5-19-9-22/h1-4,7-9H,5-6H2,(H2,17,23)(H,19,22)(H,20,21)" A1B0J InChIKey InChI 1.06 IQHZYBCZKRHMLA-UHFFFAOYSA-N A1B0J SMILES_CANONICAL CACTVS 3.385 "NC(=O)c1ccc2c(c1)nc(NCCNC=O)c3ccncc23" A1B0J SMILES CACTVS 3.385 "NC(=O)c1ccc2c(c1)nc(NCCNC=O)c3ccncc23" A1B0J SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc2c(cc1C(=O)N)nc(c3c2cncc3)NCCNC=O" A1B0J SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc2c(cc1C(=O)N)nc(c3c2cncc3)NCCNC=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B0J "SYSTEMATIC NAME" ACDLabs 14.52 "5-[(2-formamidoethyl)amino]benzo[c][2,6]naphthyridine-8-carboxamide" A1B0J "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "5-(2-formamidoethylamino)benzo[c][2,6]naphthyridine-8-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B0J "Create component" 2025-03-12 RCSB A1B0J "Initial release" 2026-01-14 RCSB #