data_A1B18 # _chem_comp.id A1B18 _chem_comp.name "(3S)-1-[(1H-indol-6-yl)methyl]-6-oxopiperidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H17 N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-21 _chem_comp.pdbx_modified_date 2025-03-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 271.314 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B18 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I3Y _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B18 N1 N1 N 0 1 N N N N N N 24.784 14.373 10.255 -1.049 -0.693 0.825 N1 A1B18 1 A1B18 C4 C1 C 0 1 N N N N N N 23.560 14.472 9.665 -1.151 -1.831 0.138 C4 A1B18 2 A1B18 C5 C2 C 0 1 N N N N N N 25.967 14.162 9.407 0.050 -0.566 1.785 C5 A1B18 3 A1B18 C6 C3 C 0 1 Y N N N N N 26.199 12.711 9.065 1.255 0.019 1.095 C6 A1B18 4 A1B18 C7 C4 C 0 1 Y N N N N N 25.447 11.710 9.666 1.428 1.396 1.064 C7 A1B18 5 A1B18 C8 C5 C 0 1 Y N N N N N 25.684 10.371 9.402 2.514 1.946 0.444 C8 A1B18 6 A1B18 C10 C6 C 0 1 Y N N N N N 27.209 8.752 8.016 4.704 1.357 -0.896 C10 A1B18 7 A1B18 C13 C7 C 0 1 Y N N N N N 27.195 12.360 8.158 2.177 -0.818 0.505 C13 A1B18 8 A1B18 O1 O1 O 0 1 N N N N N N 23.416 14.422 8.448 -0.307 -2.684 0.313 O1 A1B18 9 A1B18 C3 C8 C 0 1 N N N N N N 22.363 14.668 10.558 -2.255 -2.113 -0.840 C3 A1B18 10 A1B18 C2 C9 C 0 1 N N N N N N 22.683 15.093 11.983 -2.940 -0.805 -1.244 C2 A1B18 11 A1B18 C14 C10 C 0 1 N N N N N N 25.086 14.502 11.688 -1.960 0.436 0.677 C14 A1B18 12 A1B18 C1 C11 C 0 1 N N S N N N 23.838 14.261 12.542 -3.271 -0.019 0.030 C1 A1B18 13 A1B18 C C12 C 0 1 N N N N N N 24.085 14.612 13.999 -4.104 1.187 -0.322 C A1B18 14 A1B18 O O2 O 0 1 N N N N N N 24.542 15.714 14.322 -3.699 2.300 -0.064 O A1B18 15 A1B18 N N2 N 0 1 N N N N N N 23.763 13.680 14.879 -5.299 1.028 -0.924 N A1B18 16 A1B18 C12 C13 C 0 1 Y N N N N N 27.429 11.015 7.890 3.290 -0.280 -0.132 C12 A1B18 17 A1B18 N2 N3 N 0 1 Y N N N N N 28.345 10.419 7.055 4.361 -0.834 -0.797 N2 A1B18 18 A1B18 C11 C14 C 0 1 Y N N N N N 28.205 9.059 7.147 5.192 0.156 -1.245 C11 A1B18 19 A1B18 C9 C15 C 0 1 Y N N N N N 26.690 9.991 8.512 3.458 1.116 -0.165 C9 A1B18 20 A1B18 H9 H1 H 0 1 N N N N N N 25.832 14.725 8.472 -0.254 0.089 2.602 H9 A1B18 21 A1B18 H8 H2 H 0 1 N N N N N N 26.852 14.542 9.939 0.301 -1.549 2.182 H8 A1B18 22 A1B18 H10 H3 H 0 1 N N N N N N 24.660 11.981 10.354 0.698 2.038 1.535 H10 A1B18 23 A1B18 H11 H4 H 0 1 N N N N N N 25.086 9.615 9.889 2.642 3.018 0.424 H11 A1B18 24 A1B18 H12 H5 H 0 1 N N N N N N 26.872 7.761 8.283 5.147 2.318 -1.113 H12 A1B18 25 A1B18 H14 H6 H 0 1 N N N N N N 27.780 13.124 7.667 2.035 -1.888 0.538 H14 A1B18 26 A1B18 H7 H7 H 0 1 N N N N N N 21.811 13.717 10.602 -1.839 -2.592 -1.727 H7 A1B18 27 A1B18 H6 H8 H 0 1 N N N N N N 21.725 15.442 10.107 -2.986 -2.777 -0.379 H6 A1B18 28 A1B18 H5 H9 H 0 1 N N N N N N 21.793 14.947 12.613 -2.270 -0.219 -1.873 H5 A1B18 29 A1B18 H4 H10 H 0 1 N N N N N N 22.966 16.156 11.989 -3.858 -1.025 -1.789 H4 A1B18 30 A1B18 H16 H11 H 0 1 N N N N N N 25.855 13.764 11.960 -2.176 0.856 1.659 H16 A1B18 31 A1B18 H15 H12 H 0 1 N N N N N N 25.465 15.516 11.885 -1.491 1.197 0.054 H15 A1B18 32 A1B18 H H13 H 0 1 N N N N N N 23.568 13.197 12.476 -3.822 -0.657 0.722 H A1B18 33 A1B18 H3 H14 H 0 1 N N N N N N 23.886 13.851 15.856 -5.623 0.137 -1.130 H3 A1B18 34 A1B18 H2 H15 H 0 1 N N N N N N 23.396 12.803 14.567 -5.835 1.804 -1.151 H2 A1B18 35 A1B18 H1 H16 H 0 1 N N N N N N 29.004 10.899 6.476 4.504 -1.784 -0.929 H1 A1B18 36 A1B18 H13 H17 H 0 1 N N N N N N 28.800 8.337 6.607 6.106 -0.005 -1.798 H13 A1B18 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B18 N C SING N N 1 A1B18 O C DOUB N N 2 A1B18 C C1 SING N N 3 A1B18 C1 C2 SING N N 4 A1B18 C2 C3 SING N N 5 A1B18 C3 C4 SING N N 6 A1B18 C4 O1 DOUB N N 7 A1B18 N1 C4 SING N N 8 A1B18 C5 N1 SING N N 9 A1B18 C6 C5 SING N N 10 A1B18 C6 C7 DOUB Y N 11 A1B18 C7 C8 SING Y N 12 A1B18 C8 C9 DOUB Y N 13 A1B18 C9 C10 SING Y N 14 A1B18 C10 C11 DOUB Y N 15 A1B18 C11 N2 SING Y N 16 A1B18 N2 C12 SING Y N 17 A1B18 C9 C12 SING Y N 18 A1B18 C12 C13 DOUB Y N 19 A1B18 C13 C6 SING Y N 20 A1B18 C14 N1 SING N N 21 A1B18 C1 C14 SING N N 22 A1B18 C5 H9 SING N N 23 A1B18 C5 H8 SING N N 24 A1B18 C7 H10 SING N N 25 A1B18 C8 H11 SING N N 26 A1B18 C10 H12 SING N N 27 A1B18 C13 H14 SING N N 28 A1B18 C3 H7 SING N N 29 A1B18 C3 H6 SING N N 30 A1B18 C2 H5 SING N N 31 A1B18 C2 H4 SING N N 32 A1B18 C14 H16 SING N N 33 A1B18 C14 H15 SING N N 34 A1B18 C1 H SING N N 35 A1B18 N H3 SING N N 36 A1B18 N H2 SING N N 37 A1B18 N2 H1 SING N N 38 A1B18 C11 H13 SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B18 SMILES ACDLabs 14.52 "NC(=O)C1CCC(=O)N(Cc2cc3[NH]ccc3cc2)C1" A1B18 InChI InChI 1.06 "InChI=1S/C15H17N3O2/c16-15(20)12-3-4-14(19)18(9-12)8-10-1-2-11-5-6-17-13(11)7-10/h1-2,5-7,12,17H,3-4,8-9H2,(H2,16,20)/t12-/m0/s1" A1B18 InChIKey InChI 1.06 DJIPBZNZGHFGJT-LBPRGKRZSA-N A1B18 SMILES_CANONICAL CACTVS 3.385 "NC(=O)[C@H]1CCC(=O)N(C1)Cc2ccc3cc[nH]c3c2" A1B18 SMILES CACTVS 3.385 "NC(=O)[CH]1CCC(=O)N(C1)Cc2ccc3cc[nH]c3c2" A1B18 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(cc2c1cc[nH]2)CN3C[C@H](CCC3=O)C(=O)N" A1B18 SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(cc2c1cc[nH]2)CN3CC(CCC3=O)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B18 "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-1-[(1H-indol-6-yl)methyl]-6-oxopiperidine-3-carboxamide" A1B18 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-1-(1~{H}-indol-6-ylmethyl)-6-oxidanylidene-piperidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B18 "Create component" 2025-03-21 RCSB A1B18 "Initial release" 2025-04-02 RCSB #