data_A1B1X # _chem_comp.id A1B1X _chem_comp.name "(3S)-1-[(4,6-dimethylpyrimidin-5-yl)acetyl]piperidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H20 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-21 _chem_comp.pdbx_modified_date 2025-03-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 276.334 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B1X _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I3H _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B1X N1 N1 N 0 1 Y N N N N N 7.156 10.095 25.961 4.547 0.421 -1.008 N1 A1B1X 1 A1B1X N3 N2 N 0 1 N N N N N N 11.370 13.684 17.802 -4.313 2.347 -0.340 N3 A1B1X 2 A1B1X C4 C1 C 0 1 N N N N N N 7.591 12.461 25.779 2.962 -0.931 -2.313 C4 A1B1X 3 A1B1X C5 C2 C 0 1 Y N N N N N 9.009 10.724 24.594 2.629 -0.320 0.100 C5 A1B1X 4 A1B1X C6 C3 C 0 1 N N N N N N 9.993 11.780 24.137 1.324 -1.075 0.101 C6 A1B1X 5 A1B1X C7 C4 C 0 1 N N N N N N 9.618 12.383 22.797 0.205 -0.145 -0.291 C7 A1B1X 6 A1B1X C8 C5 C 0 1 N N N N N N 11.442 14.066 23.149 -1.364 -2.009 -0.052 C8 A1B1X 7 A1B1X C10 C6 C 0 1 N N N N N N 12.484 14.759 20.957 -3.665 -1.239 0.542 C10 A1B1X 8 A1B1X C13 C7 C 0 1 N N N N N N 10.139 14.012 21.048 -2.162 0.290 -0.739 C13 A1B1X 9 A1B1X O1 O1 O 0 1 N N N N N N 10.783 15.681 18.636 -5.522 0.490 -0.235 O1 A1B1X 10 A1B1X C12 C8 C 0 1 N N N N N N 11.170 14.520 18.803 -4.443 1.027 -0.099 C12 A1B1X 11 A1B1X C11 C9 C 0 1 N N S N N N 11.410 13.961 20.195 -3.249 0.220 0.338 C11 A1B1X 12 A1B1X C9 C10 C 0 1 N N N N N N 12.734 14.170 22.352 -2.460 -2.054 1.018 C9 A1B1X 13 A1B1X N2 N3 N 0 1 N N N N N N 10.383 13.410 22.363 -1.060 -0.604 -0.358 N2 A1B1X 14 A1B1X O O2 O 0 1 N N N N N N 8.654 11.969 22.162 0.444 1.016 -0.547 O A1B1X 15 A1B1X C1 C11 C 0 1 Y N N N N N 9.200 9.380 24.270 3.079 0.320 1.244 C1 A1B1X 16 A1B1X C C12 C 0 1 N N N N N N 10.305 8.928 23.362 2.269 0.275 2.514 C A1B1X 17 A1B1X C3 C13 C 0 1 Y N N N N N 7.940 11.043 25.434 3.407 -0.251 -1.044 C3 A1B1X 18 A1B1X C2 C14 C 0 1 Y N N N N N 7.461 8.847 25.609 4.943 1.018 0.098 C2 A1B1X 19 A1B1X N N4 N 0 1 Y N N N N N 8.418 8.423 24.783 4.229 0.973 1.205 N A1B1X 20 A1B1X H17 H1 H 0 1 N N N N N N 11.208 13.982 16.861 -5.082 2.867 -0.621 H17 A1B1X 21 A1B1X H16 H2 H 0 1 N N N N N N 11.684 12.752 17.984 -3.450 2.777 -0.231 H16 A1B1X 22 A1B1X H6 H3 H 0 1 N N N N N N 6.709 12.473 26.436 3.349 -1.950 -2.335 H6 A1B1X 23 A1B1X H5 H4 H 0 1 N N N N N N 8.440 12.932 26.296 1.873 -0.955 -2.350 H5 A1B1X 24 A1B1X H7 H5 H 0 1 N N N N N N 7.368 13.018 24.857 3.342 -0.380 -3.174 H7 A1B1X 25 A1B1X H8 H6 H 0 1 N N N N N N 10.023 12.583 24.889 1.380 -1.898 -0.612 H8 A1B1X 26 A1B1X H9 H7 H 0 1 N N N N N N 10.989 11.320 24.051 1.135 -1.472 1.099 H9 A1B1X 27 A1B1X H10 H8 H 0 1 N N N N N N 11.109 15.077 23.426 -0.468 -2.503 0.323 H10 A1B1X 28 A1B1X H11 H9 H 0 1 N N N N N N 11.629 13.479 24.060 -1.712 -2.515 -0.952 H11 A1B1X 29 A1B1X H14 H10 H 0 1 N N N N N N 12.148 15.801 21.063 -4.456 -1.290 1.290 H14 A1B1X 30 A1B1X H15 H11 H 0 1 N N N N N N 13.423 14.733 20.384 -4.030 -1.647 -0.400 H15 A1B1X 31 A1B1X H18 H12 H 0 1 N N N N N N 9.833 15.060 21.180 -2.575 -0.026 -1.696 H18 A1B1X 32 A1B1X H19 H13 H 0 1 N N N N N N 9.338 13.457 20.538 -1.793 1.313 -0.820 H19 A1B1X 33 A1B1X H H14 H 0 1 N N N N N N 11.740 12.915 20.110 -2.860 0.621 1.274 H A1B1X 34 A1B1X H12 H15 H 0 1 N N N N N N 13.438 14.819 22.894 -2.763 -3.087 1.185 H12 A1B1X 35 A1B1X H13 H16 H 0 1 N N N N N N 13.170 13.166 22.244 -2.079 -1.631 1.947 H13 A1B1X 36 A1B1X H2 H17 H 0 1 N N N N N N 10.280 7.832 23.270 1.579 1.118 2.535 H2 A1B1X 37 A1B1X H3 H18 H 0 1 N N N N N N 10.172 9.382 22.369 1.705 -0.657 2.551 H3 A1B1X 38 A1B1X H1 H19 H 0 1 N N N N N N 11.274 9.239 23.781 2.937 0.330 3.373 H1 A1B1X 39 A1B1X H4 H20 H 0 1 N N N N N N 6.851 8.074 26.053 5.878 1.559 0.097 H4 A1B1X 40 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B1X C C1 SING N N 1 A1B1X C1 N DOUB Y N 2 A1B1X N C2 SING Y N 3 A1B1X C2 N1 DOUB Y N 4 A1B1X N1 C3 SING Y N 5 A1B1X C4 C3 SING N N 6 A1B1X C3 C5 DOUB Y N 7 A1B1X C1 C5 SING Y N 8 A1B1X C5 C6 SING N N 9 A1B1X C6 C7 SING N N 10 A1B1X O C7 DOUB N N 11 A1B1X C7 N2 SING N N 12 A1B1X N2 C8 SING N N 13 A1B1X C8 C9 SING N N 14 A1B1X C9 C10 SING N N 15 A1B1X C10 C11 SING N N 16 A1B1X C11 C12 SING N N 17 A1B1X N3 C12 SING N N 18 A1B1X C12 O1 DOUB N N 19 A1B1X C13 C11 SING N N 20 A1B1X N2 C13 SING N N 21 A1B1X N3 H17 SING N N 22 A1B1X N3 H16 SING N N 23 A1B1X C4 H6 SING N N 24 A1B1X C4 H5 SING N N 25 A1B1X C4 H7 SING N N 26 A1B1X C6 H8 SING N N 27 A1B1X C6 H9 SING N N 28 A1B1X C8 H10 SING N N 29 A1B1X C8 H11 SING N N 30 A1B1X C10 H14 SING N N 31 A1B1X C10 H15 SING N N 32 A1B1X C13 H18 SING N N 33 A1B1X C13 H19 SING N N 34 A1B1X C11 H SING N N 35 A1B1X C9 H12 SING N N 36 A1B1X C9 H13 SING N N 37 A1B1X C H2 SING N N 38 A1B1X C H3 SING N N 39 A1B1X C H1 SING N N 40 A1B1X C2 H4 SING N N 41 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B1X SMILES ACDLabs 14.52 "O=C(Cc1c(C)ncnc1C)N1CCCC(C1)C(N)=O" A1B1X InChI InChI 1.06 "InChI=1S/C14H20N4O2/c1-9-12(10(2)17-8-16-9)6-13(19)18-5-3-4-11(7-18)14(15)20/h8,11H,3-7H2,1-2H3,(H2,15,20)/t11-/m0/s1" A1B1X InChIKey InChI 1.06 YTDTZVUMJMJXOJ-NSHDSACASA-N A1B1X SMILES_CANONICAL CACTVS 3.385 "Cc1ncnc(C)c1CC(=O)N2CCC[C@@H](C2)C(N)=O" A1B1X SMILES CACTVS 3.385 "Cc1ncnc(C)c1CC(=O)N2CCC[CH](C2)C(N)=O" A1B1X SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1c(c(ncn1)C)CC(=O)N2CCC[C@@H](C2)C(=O)N" A1B1X SMILES "OpenEye OEToolkits" 3.1.0.0 "Cc1c(c(ncn1)C)CC(=O)N2CCCC(C2)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B1X "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-1-[(4,6-dimethylpyrimidin-5-yl)acetyl]piperidine-3-carboxamide" A1B1X "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-1-[2-(4,6-dimethylpyrimidin-5-yl)ethanoyl]piperidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B1X "Create component" 2025-03-21 RCSB A1B1X "Initial release" 2025-04-02 RCSB #