data_A1B27 # _chem_comp.id A1B27 _chem_comp.name "(3S)-1-{(1R,2S)-2-[(methylsulfanyl)methyl]cyclopropane-1-carbonyl}piperidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H20 N2 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-21 _chem_comp.pdbx_modified_date 2025-03-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 256.364 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B27 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I4R _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B27 N1 N1 N 0 1 N N N N N N 11.320 14.720 18.102 5.188 1.478 -0.809 N1 A1B27 1 A1B27 C4 C1 C 0 1 N N S N N N 8.192 13.857 24.495 -1.332 -1.529 -0.066 C4 A1B27 2 A1B27 C5 C2 C 0 1 N N N N N N 8.438 13.829 22.992 -0.359 -0.417 0.229 C5 A1B27 3 A1B27 C6 C3 C 0 1 N N N N N N 10.450 15.254 23.313 1.451 -2.065 0.240 C6 A1B27 4 A1B27 C7 C4 C 0 1 N N N N N N 11.805 15.115 22.648 2.577 -2.086 -0.798 C7 A1B27 5 A1B27 C8 C5 C 0 1 N N N N N N 11.751 15.694 21.238 3.647 -1.065 -0.405 C8 A1B27 6 A1B27 C10 C6 C 0 1 N N N N N N 10.671 15.483 18.977 4.096 1.345 -0.029 C10 A1B27 7 A1B27 O1 O1 O 0 1 N N N N N N 10.095 16.529 18.665 3.969 2.037 0.959 O1 A1B27 8 A1B27 C9 C7 C 0 1 N N S N N N 10.665 14.991 20.413 3.034 0.337 -0.385 C9 A1B27 9 A1B27 C11 C8 C 0 1 N N N N N N 9.303 15.134 21.104 1.913 0.386 0.658 C11 A1B27 10 A1B27 N N2 N 0 1 N N N N N N 9.373 14.668 22.494 0.953 -0.689 0.371 N A1B27 11 A1B27 O O2 O 0 1 N N N N N N 7.735 13.169 22.255 -0.758 0.724 0.339 O A1B27 12 A1B27 C3 C9 C 0 1 N N N N N N 7.030 13.061 25.037 -2.329 -1.906 1.032 C3 A1B27 13 A1B27 C2 C10 C 0 1 N N R N N N 8.426 12.608 25.322 -2.809 -1.156 -0.213 C2 A1B27 14 A1B27 C1 C11 C 0 1 N N N N N N 8.887 11.271 24.757 -3.185 0.318 -0.050 C1 A1B27 15 A1B27 S S1 S 0 1 N N N N N N 10.644 11.114 24.377 -4.949 0.535 -0.411 S A1B27 16 A1B27 C C12 C 0 1 N N N N N N 10.670 9.548 23.505 -5.199 2.315 -0.168 C A1B27 17 A1B27 H17 H1 H 0 1 N N N N N N 11.358 14.985 17.139 5.871 2.127 -0.580 H17 A1B27 18 A1B27 H16 H2 H 0 1 N N N N N N 11.770 13.881 18.408 5.291 0.922 -1.597 H16 A1B27 19 A1B27 H1 H3 H 0 1 N N N N N N 8.400 14.813 24.997 -0.950 -2.332 -0.696 H1 A1B27 20 A1B27 H10 H4 H 0 1 N N N N N N 10.238 16.322 23.468 0.640 -2.717 -0.086 H10 A1B27 21 A1B27 H11 H5 H 0 1 N N N N N N 10.477 14.741 24.285 1.833 -2.410 1.201 H11 A1B27 22 A1B27 H12 H6 H 0 1 N N N N N N 12.558 15.658 23.237 3.019 -3.081 -0.835 H12 A1B27 23 A1B27 H13 H7 H 0 1 N N N N N N 12.078 14.051 22.595 2.173 -1.830 -1.778 H13 A1B27 24 A1B27 H14 H8 H 0 1 N N N N N N 11.524 16.769 21.296 4.033 -1.307 0.586 H14 A1B27 25 A1B27 H15 H9 H 0 1 N N N N N N 12.726 15.551 20.750 4.461 -1.095 -1.129 H15 A1B27 26 A1B27 H2 H10 H 0 1 N N N N N N 10.911 13.919 20.395 2.627 0.570 -1.369 H2 A1B27 27 A1B27 H18 H11 H 0 1 N N N N N N 9.002 16.192 21.093 2.334 0.243 1.654 H18 A1B27 28 A1B27 H19 H12 H 0 1 N N N N N N 8.558 14.535 20.560 1.410 1.351 0.609 H19 A1B27 29 A1B27 H9 H13 H 0 1 N N N N N N 6.395 12.482 24.351 -2.603 -2.957 1.124 H9 A1B27 30 A1B27 H8 H14 H 0 1 N N N N N N 6.412 13.475 25.847 -2.281 -1.349 1.968 H8 A1B27 31 A1B27 H H15 H 0 1 N N N N N N 8.770 12.804 26.348 -3.398 -1.714 -0.941 H A1B27 32 A1B27 H7 H16 H 0 1 N N N N N N 8.328 11.091 23.827 -2.982 0.633 0.974 H7 A1B27 33 A1B27 H6 H17 H 0 1 N N N N N N 8.634 10.493 25.493 -2.595 0.922 -0.739 H6 A1B27 34 A1B27 H4 H18 H 0 1 N N N N N N 11.701 9.313 23.203 -4.946 2.581 0.859 H4 A1B27 35 A1B27 H3 H19 H 0 1 N N N N N N 10.292 8.754 24.166 -4.559 2.869 -0.854 H3 A1B27 36 A1B27 H5 H20 H 0 1 N N N N N N 10.033 9.616 22.611 -6.242 2.566 -0.361 H5 A1B27 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B27 C S SING N N 1 A1B27 S C1 SING N N 2 A1B27 C1 C2 SING N N 3 A1B27 C2 C3 SING N N 4 A1B27 C3 C4 SING N N 5 A1B27 C2 C4 SING N N 6 A1B27 C4 C5 SING N N 7 A1B27 O C5 DOUB N N 8 A1B27 C5 N SING N N 9 A1B27 N C6 SING N N 10 A1B27 C6 C7 SING N N 11 A1B27 C7 C8 SING N N 12 A1B27 C8 C9 SING N N 13 A1B27 C9 C10 SING N N 14 A1B27 N1 C10 SING N N 15 A1B27 C10 O1 DOUB N N 16 A1B27 C11 C9 SING N N 17 A1B27 N C11 SING N N 18 A1B27 N1 H17 SING N N 19 A1B27 N1 H16 SING N N 20 A1B27 C4 H1 SING N N 21 A1B27 C6 H10 SING N N 22 A1B27 C6 H11 SING N N 23 A1B27 C7 H12 SING N N 24 A1B27 C7 H13 SING N N 25 A1B27 C8 H14 SING N N 26 A1B27 C8 H15 SING N N 27 A1B27 C9 H2 SING N N 28 A1B27 C11 H18 SING N N 29 A1B27 C11 H19 SING N N 30 A1B27 C3 H9 SING N N 31 A1B27 C3 H8 SING N N 32 A1B27 C2 H SING N N 33 A1B27 C1 H7 SING N N 34 A1B27 C1 H6 SING N N 35 A1B27 C H4 SING N N 36 A1B27 C H3 SING N N 37 A1B27 C H5 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B27 SMILES ACDLabs 14.52 "O=C(C1CC1CSC)N1CCCC(C1)C(N)=O" A1B27 InChI InChI 1.06 "InChI=1S/C12H20N2O2S/c1-17-7-9-5-10(9)12(16)14-4-2-3-8(6-14)11(13)15/h8-10H,2-7H2,1H3,(H2,13,15)/t8-,9+,10+/m0/s1" A1B27 InChIKey InChI 1.06 JJJYSLKCPGSMLG-IVZWLZJFSA-N A1B27 SMILES_CANONICAL CACTVS 3.385 "CSC[C@@H]1C[C@@H]1C(=O)N2CCC[C@@H](C2)C(N)=O" A1B27 SMILES CACTVS 3.385 "CSC[CH]1C[CH]1C(=O)N2CCC[CH](C2)C(N)=O" A1B27 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CSC[C@@H]1C[C@@H]1C(=O)N2CCC[C@@H](C2)C(=O)N" A1B27 SMILES "OpenEye OEToolkits" 3.1.0.0 "CSCC1CC1C(=O)N2CCCC(C2)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B27 "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-1-{(1R,2S)-2-[(methylsulfanyl)methyl]cyclopropane-1-carbonyl}piperidine-3-carboxamide" A1B27 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-1-[(1~{S},2~{R})-2-(methylsulfanylmethyl)cyclopropyl]carbonylpiperidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B27 "Create component" 2025-03-21 RCSB A1B27 "Initial release" 2025-04-02 RCSB #