data_A1B29 # _chem_comp.id A1B29 _chem_comp.name "(3S)-1-[(4R)-3,4-dihydro-2H-1-benzothiopyran-4-carbonyl]piperidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H20 N2 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-21 _chem_comp.pdbx_modified_date 2025-03-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 304.407 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B29 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I4T _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B29 N1 N1 N 0 1 N N N N N N 25.189 13.881 10.311 1.314 0.125 0.538 N1 A1B29 1 A1B29 C4 C1 C 0 1 N N N N N N 24.133 14.625 9.598 1.446 -0.920 1.562 C4 A1B29 2 A1B29 C5 C2 C 0 1 N N N N N N 25.894 12.853 9.806 0.113 0.405 -0.006 C5 A1B29 3 A1B29 C6 C3 C 0 1 N N R N N N 25.582 12.394 8.383 -1.091 -0.425 0.358 C6 A1B29 4 A1B29 C7 C4 C 0 1 N N N N N N 24.412 11.378 8.373 -1.128 -1.648 -0.542 C7 A1B29 5 A1B29 C8 C5 C 0 1 N N N N N N 24.785 10.088 9.085 -2.328 -2.521 -0.150 C8 A1B29 6 A1B29 C10 C6 C 0 1 Y N N N N N 28.124 10.116 6.681 -4.637 0.872 -0.208 C10 A1B29 7 A1B29 C13 C7 C 0 1 Y N N N N N 27.851 12.776 7.362 -2.174 1.767 0.631 C13 A1B29 8 A1B29 C15 C8 C 0 1 N N N N N N 25.420 14.368 11.674 2.514 0.864 0.123 C15 A1B29 9 A1B29 O1 O1 O 0 1 N N N N N N 26.758 12.295 10.452 0.001 1.326 -0.787 O1 A1B29 10 A1B29 C3 C9 C 0 1 N N N N N N 22.810 14.545 10.347 2.529 -1.909 1.119 C3 A1B29 11 A1B29 C2 C10 C 0 1 N N N N N N 22.989 14.980 11.812 3.824 -1.146 0.829 C2 A1B29 12 A1B29 C1 C11 C 0 1 N N S N N N 24.135 14.203 12.487 3.587 -0.141 -0.307 C1 A1B29 13 A1B29 C C12 C 0 1 N N N N N N 24.298 14.598 13.946 4.872 0.586 -0.611 C A1B29 14 A1B29 O O2 O 0 1 N N N N N N 24.741 15.704 14.261 4.929 1.792 -0.497 O A1B29 15 A1B29 N N2 N 0 1 N N N N N N 23.984 13.672 14.835 5.959 -0.105 -1.009 N A1B29 16 A1B29 C14 C13 C 0 1 Y N N N N N 26.854 11.880 7.745 -2.317 0.434 0.252 C14 A1B29 17 A1B29 C12 C14 C 0 1 Y N N N N N 28.955 12.353 6.644 -3.243 2.635 0.590 C12 A1B29 18 A1B29 C11 C15 C 0 1 Y N N N N N 29.077 11.036 6.286 -4.484 2.187 0.172 C11 A1B29 19 A1B29 C9 C16 C 0 1 Y N N N N N 27.030 10.528 7.441 -3.553 -0.008 -0.177 C9 A1B29 20 A1B29 S S1 S 0 1 N N N N N N 26.006 9.237 8.054 -3.827 -1.666 -0.718 S A1B29 21 A1B29 H9 H1 H 0 1 N N N N N N 24.005 14.194 8.594 1.731 -0.468 2.512 H9 A1B29 22 A1B29 H8 H2 H 0 1 N N N N N N 24.433 15.680 9.509 0.496 -1.442 1.676 H8 A1B29 23 A1B29 H1 H3 H 0 1 N N N N N N 25.254 13.276 7.814 -0.987 -0.755 1.391 H1 A1B29 24 A1B29 H10 H4 H 0 1 N N N N N N 23.545 11.827 8.879 -1.229 -1.333 -1.581 H10 A1B29 25 A1B29 H11 H5 H 0 1 N N N N N N 24.149 11.147 7.330 -0.207 -2.218 -0.420 H11 A1B29 26 A1B29 H12 H6 H 0 1 N N N N N N 25.217 10.314 10.071 -2.252 -3.495 -0.633 H12 A1B29 27 A1B29 H13 H7 H 0 1 N N N N N N 23.893 9.456 9.211 -2.359 -2.644 0.932 H13 A1B29 28 A1B29 H14 H8 H 0 1 N N N N N N 28.227 9.078 6.401 -5.604 0.518 -0.532 H14 A1B29 29 A1B29 H17 H9 H 0 1 N N N N N N 27.760 13.818 7.630 -1.211 2.126 0.962 H17 A1B29 30 A1B29 H19 H10 H 0 1 N N N N N N 26.229 13.787 12.141 2.270 1.518 -0.714 H19 A1B29 31 A1B29 H18 H11 H 0 1 N N N N N N 25.703 15.431 11.643 2.882 1.461 0.958 H18 A1B29 32 A1B29 H7 H12 H 0 1 N N N N N N 22.442 13.509 10.320 2.705 -2.635 1.913 H7 A1B29 33 A1B29 H6 H13 H 0 1 N N N N N N 22.079 15.207 9.860 2.202 -2.427 0.218 H6 A1B29 34 A1B29 H5 H14 H 0 1 N N N N N N 22.054 14.789 12.360 4.137 -0.608 1.724 H5 A1B29 35 A1B29 H4 H15 H 0 1 N N N N N N 23.218 16.055 11.842 4.603 -1.850 0.537 H4 A1B29 36 A1B29 H H16 H 0 1 N N N N N N 23.865 13.137 12.462 3.249 -0.670 -1.197 H A1B29 37 A1B29 H3 H17 H 0 1 N N N N N N 24.103 13.855 15.811 5.914 -1.070 -1.100 H3 A1B29 38 A1B29 H2 H18 H 0 1 N N N N N N 23.627 12.788 14.532 6.786 0.362 -1.205 H2 A1B29 39 A1B29 H16 H19 H 0 1 N N N N N N 29.721 13.061 6.365 -3.113 3.667 0.884 H16 A1B29 40 A1B29 H15 H20 H 0 1 N N N N N N 29.921 10.716 5.693 -5.325 2.863 0.145 H15 A1B29 41 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B29 N C SING N N 1 A1B29 O C DOUB N N 2 A1B29 C C1 SING N N 3 A1B29 C1 C2 SING N N 4 A1B29 C2 C3 SING N N 5 A1B29 C3 C4 SING N N 6 A1B29 C4 N1 SING N N 7 A1B29 N1 C5 SING N N 8 A1B29 C5 O1 DOUB N N 9 A1B29 C6 C5 SING N N 10 A1B29 C6 C7 SING N N 11 A1B29 C7 C8 SING N N 12 A1B29 C8 S SING N N 13 A1B29 S C9 SING N N 14 A1B29 C9 C10 SING Y N 15 A1B29 C10 C11 DOUB Y N 16 A1B29 C11 C12 SING Y N 17 A1B29 C12 C13 DOUB Y N 18 A1B29 C13 C14 SING Y N 19 A1B29 C9 C14 DOUB Y N 20 A1B29 C14 C6 SING N N 21 A1B29 C15 N1 SING N N 22 A1B29 C1 C15 SING N N 23 A1B29 C4 H9 SING N N 24 A1B29 C4 H8 SING N N 25 A1B29 C6 H1 SING N N 26 A1B29 C7 H10 SING N N 27 A1B29 C7 H11 SING N N 28 A1B29 C8 H12 SING N N 29 A1B29 C8 H13 SING N N 30 A1B29 C10 H14 SING N N 31 A1B29 C13 H17 SING N N 32 A1B29 C15 H19 SING N N 33 A1B29 C15 H18 SING N N 34 A1B29 C3 H7 SING N N 35 A1B29 C3 H6 SING N N 36 A1B29 C2 H5 SING N N 37 A1B29 C2 H4 SING N N 38 A1B29 C1 H SING N N 39 A1B29 N H3 SING N N 40 A1B29 N H2 SING N N 41 A1B29 C12 H16 SING N N 42 A1B29 C11 H15 SING N N 43 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B29 SMILES ACDLabs 14.52 "NC(=O)C1CCCN(C1)C(=O)C1CCSc2ccccc21" A1B29 InChI InChI 1.06 "InChI=1S/C16H20N2O2S/c17-15(19)11-4-3-8-18(10-11)16(20)13-7-9-21-14-6-2-1-5-12(13)14/h1-2,5-6,11,13H,3-4,7-10H2,(H2,17,19)/t11-,13+/m0/s1" A1B29 InChIKey InChI 1.06 CIPSLIIOJPGGQL-WCQYABFASA-N A1B29 SMILES_CANONICAL CACTVS 3.385 "NC(=O)[C@H]1CCCN(C1)C(=O)[C@@H]2CCSc3ccccc23" A1B29 SMILES CACTVS 3.385 "NC(=O)[CH]1CCCN(C1)C(=O)[CH]2CCSc3ccccc23" A1B29 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1ccc2c(c1)[C@@H](CCS2)C(=O)N3CCC[C@@H](C3)C(=O)N" A1B29 SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccc2c(c1)C(CCS2)C(=O)N3CCCC(C3)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B29 "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-1-[(4R)-3,4-dihydro-2H-1-benzothiopyran-4-carbonyl]piperidine-3-carboxamide" A1B29 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-1-[[(4~{R})-3,4-dihydro-2~{H}-thiochromen-4-yl]carbonyl]piperidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B29 "Create component" 2025-03-21 RCSB A1B29 "Initial release" 2025-04-02 RCSB #