data_A1B2S # _chem_comp.id A1B2S _chem_comp.name "(3S)-1-({1-[(methylsulfanyl)methyl]cyclopropyl}acetyl)piperidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H22 N2 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-21 _chem_comp.pdbx_modified_date 2025-03-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 270.391 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B2S _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I4E _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B2S N1 N1 N 0 1 N N N N N N 10.720 15.321 17.438 -5.253 1.293 -0.865 N1 A1B2S 1 A1B2S C4 C1 C 0 1 N N N N N N 8.621 14.396 22.221 0.233 -0.853 -0.006 C4 A1B2S 2 A1B2S C5 C2 C 0 1 N N N N N N 10.291 16.173 22.687 -1.123 -0.314 1.960 C5 A1B2S 3 A1B2S C6 C3 C 0 1 N N N N N N 11.600 16.199 21.917 -1.972 0.956 2.075 C6 A1B2S 4 A1B2S C7 C4 C 0 1 N N N N N N 11.408 16.660 20.489 -3.302 0.743 1.348 C7 A1B2S 5 A1B2S C8 C5 C 0 1 N N S N N N 10.324 15.880 19.730 -3.037 0.471 -0.135 C8 A1B2S 6 A1B2S C10 C6 C 0 1 N N N N N N 9.082 16.139 20.563 -2.200 -0.804 -0.275 C10 A1B2S 7 A1B2S O1 O1 O 0 1 N N N N N N 9.777 17.319 17.878 -4.590 -0.748 -1.428 O1 A1B2S 8 A1B2S C9 C7 C 0 1 N N N N N N 10.267 16.258 18.259 -4.349 0.294 -0.856 C9 A1B2S 9 A1B2S N N2 N 0 1 N N N N N N 9.260 15.537 21.877 -0.985 -0.664 0.540 N A1B2S 10 A1B2S O O2 O 0 1 N N N N N N 7.643 13.983 21.646 0.333 -1.141 -1.179 O A1B2S 11 A1B2S C3 C8 C 0 1 N N N N N N 9.242 13.501 23.272 1.469 -0.705 0.843 C3 A1B2S 12 A1B2S C2 C9 C 0 1 N N N N N N 8.639 12.071 23.369 2.708 -0.996 -0.007 C2 A1B2S 13 A1B2S C12 C10 C 0 1 N N N N N N 8.838 11.055 22.287 3.777 -1.913 0.593 C12 A1B2S 14 A1B2S C11 C11 C 0 1 N N N N N N 9.597 10.942 23.595 2.881 -2.420 -0.539 C11 A1B2S 15 A1B2S C1 C12 C 0 1 N N N N N N 7.162 11.849 23.730 3.182 0.154 -0.898 C1 A1B2S 16 A1B2S S S1 S 0 1 N N N N N N 7.188 12.385 25.456 3.751 1.528 0.140 S A1B2S 17 A1B2S C C13 C 0 1 N N N N N N 5.636 11.979 26.022 4.264 2.773 -1.076 C A1B2S 18 A1B2S H15 H1 H 0 1 N N N N N N 10.673 15.458 16.449 -5.061 2.126 -0.407 H15 A1B2S 19 A1B2S H14 H2 H 0 1 N N N N N N 11.109 14.477 17.808 -6.096 1.180 -1.332 H14 A1B2S 20 A1B2S H8 H3 H 0 1 N N N N N N 9.986 17.203 22.925 -0.138 -0.135 2.390 H8 A1B2S 21 A1B2S H9 H4 H 0 1 N N N N N N 10.426 15.605 23.619 -1.611 -1.130 2.494 H9 A1B2S 22 A1B2S H10 H5 H 0 1 N N N N N N 12.295 16.886 22.422 -2.163 1.172 3.126 H10 A1B2S 23 A1B2S H11 H6 H 0 1 N N N N N N 12.027 15.185 21.909 -1.440 1.792 1.622 H11 A1B2S 24 A1B2S H12 H7 H 0 1 N N N N N N 11.126 17.723 20.502 -3.823 -0.109 1.786 H12 A1B2S 25 A1B2S H13 H8 H 0 1 N N N N N N 12.362 16.540 19.954 -3.919 1.636 1.449 H13 A1B2S 26 A1B2S H H9 H 0 1 N N N N N N 10.566 14.809 19.799 -2.495 1.312 -0.567 H A1B2S 27 A1B2S H16 H10 H 0 1 N N N N N N 8.930 17.223 20.671 -2.777 -1.660 0.075 H16 A1B2S 28 A1B2S H17 H11 H 0 1 N N N N N N 8.206 15.693 20.068 -1.927 -0.949 -1.320 H17 A1B2S 29 A1B2S H6 H12 H 0 1 N N N N N N 9.118 13.989 24.250 1.525 0.312 1.230 H6 A1B2S 30 A1B2S H7 H13 H 0 1 N N N N N N 10.314 13.403 23.044 1.426 -1.409 1.674 H7 A1B2S 31 A1B2S H20 H14 H 0 1 N N N N N N 9.369 11.330 21.364 4.818 -1.696 0.353 H20 A1B2S 32 A1B2S H21 H15 H 0 1 N N N N N N 8.038 10.338 22.050 3.597 -2.308 1.593 H21 A1B2S 33 A1B2S H18 H16 H 0 1 N N N N N N 10.680 11.135 23.622 2.112 -3.150 -0.284 H18 A1B2S 34 A1B2S H19 H17 H 0 1 N N N N N N 9.349 10.143 24.309 3.333 -2.538 -1.524 H19 A1B2S 35 A1B2S H5 H18 H 0 1 N N N N N N 6.871 10.793 23.633 4.003 -0.190 -1.528 H5 A1B2S 36 A1B2S H4 H19 H 0 1 N N N N N N 6.493 12.471 23.118 2.358 0.490 -1.526 H4 A1B2S 37 A1B2S H3 H20 H 0 1 N N N N N N 5.544 12.267 27.080 4.630 3.658 -0.557 H3 A1B2S 38 A1B2S H1 H21 H 0 1 N N N N N N 4.878 12.513 25.429 5.058 2.364 -1.701 H1 A1B2S 39 A1B2S H2 H22 H 0 1 N N N N N N 5.482 10.894 25.923 3.412 3.043 -1.700 H2 A1B2S 40 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B2S C S SING N N 1 A1B2S S C1 SING N N 2 A1B2S C1 C2 SING N N 3 A1B2S C2 C3 SING N N 4 A1B2S C3 C4 SING N N 5 A1B2S O C4 DOUB N N 6 A1B2S C4 N SING N N 7 A1B2S N C5 SING N N 8 A1B2S C5 C6 SING N N 9 A1B2S C6 C7 SING N N 10 A1B2S C7 C8 SING N N 11 A1B2S C8 C9 SING N N 12 A1B2S N1 C9 SING N N 13 A1B2S C9 O1 DOUB N N 14 A1B2S C10 C8 SING N N 15 A1B2S N C10 SING N N 16 A1B2S C2 C11 SING N N 17 A1B2S C11 C12 SING N N 18 A1B2S C12 C2 SING N N 19 A1B2S N1 H15 SING N N 20 A1B2S N1 H14 SING N N 21 A1B2S C5 H8 SING N N 22 A1B2S C5 H9 SING N N 23 A1B2S C6 H10 SING N N 24 A1B2S C6 H11 SING N N 25 A1B2S C7 H12 SING N N 26 A1B2S C7 H13 SING N N 27 A1B2S C8 H SING N N 28 A1B2S C10 H16 SING N N 29 A1B2S C10 H17 SING N N 30 A1B2S C3 H6 SING N N 31 A1B2S C3 H7 SING N N 32 A1B2S C12 H20 SING N N 33 A1B2S C12 H21 SING N N 34 A1B2S C11 H18 SING N N 35 A1B2S C11 H19 SING N N 36 A1B2S C1 H5 SING N N 37 A1B2S C1 H4 SING N N 38 A1B2S C H3 SING N N 39 A1B2S C H1 SING N N 40 A1B2S C H2 SING N N 41 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B2S SMILES ACDLabs 14.52 "O=C(CC1(CSC)CC1)N1CCCC(C1)C(N)=O" A1B2S InChI InChI 1.06 "InChI=1S/C13H22N2O2S/c1-18-9-13(4-5-13)7-11(16)15-6-2-3-10(8-15)12(14)17/h10H,2-9H2,1H3,(H2,14,17)/t10-/m0/s1" A1B2S InChIKey InChI 1.06 HUXPZZDRMFMXBF-JTQLQIEISA-N A1B2S SMILES_CANONICAL CACTVS 3.385 "CSCC1(CC1)CC(=O)N2CCC[C@@H](C2)C(N)=O" A1B2S SMILES CACTVS 3.385 "CSCC1(CC1)CC(=O)N2CCC[CH](C2)C(N)=O" A1B2S SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CSCC1(CC1)CC(=O)N2CCC[C@@H](C2)C(=O)N" A1B2S SMILES "OpenEye OEToolkits" 3.1.0.0 "CSCC1(CC1)CC(=O)N2CCCC(C2)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B2S "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-1-({1-[(methylsulfanyl)methyl]cyclopropyl}acetyl)piperidine-3-carboxamide" A1B2S "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-1-[2-[1-(methylsulfanylmethyl)cyclopropyl]ethanoyl]piperidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B2S "Create component" 2025-03-21 RCSB A1B2S "Initial release" 2025-04-02 RCSB #