data_A1B33 # _chem_comp.id A1B33 _chem_comp.name "(3S)-1-[2-(methylsulfanyl)benzoyl]piperidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H18 N2 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-21 _chem_comp.pdbx_modified_date 2025-03-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 278.370 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B33 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I5M _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B33 N1 N1 N 0 1 N N N N N N 11.392 14.584 18.009 4.582 1.623 0.809 N1 A1B33 1 A1B33 C4 C1 C 0 1 Y N N N N N 7.048 12.065 25.721 -3.170 -2.392 0.554 C4 A1B33 2 A1B33 C5 C2 C 0 1 Y N N N N N 7.366 12.930 24.684 -1.931 -1.873 0.862 C5 A1B33 3 A1B33 C6 C3 C 0 1 Y N N N N N 8.307 12.556 23.721 -1.648 -0.534 0.581 C6 A1B33 4 A1B33 C7 C4 C 0 1 N N N N N N 8.399 13.333 22.434 -0.325 0.029 0.907 C7 A1B33 5 A1B33 C8 C5 C 0 1 N N N N N N 10.434 14.576 23.264 0.707 -1.703 -0.482 C8 A1B33 6 A1B33 C10 C6 C 0 1 N N N N N N 11.918 15.294 21.327 2.982 -1.049 -1.278 C10 A1B33 7 A1B33 C13 C7 C 0 1 N N N N N N 9.497 14.971 21.012 2.119 -0.095 0.863 C13 A1B33 8 A1B33 O1 O1 O 0 1 N N N N N N 10.470 16.497 18.760 5.294 -0.119 -0.366 O1 A1B33 9 A1B33 C12 C8 C 0 1 N N N N N N 10.922 15.363 18.975 4.361 0.554 0.019 C12 A1B33 10 A1B33 C11 C9 C 0 1 N N S N N N 10.857 14.742 20.361 2.955 0.196 -0.387 C11 A1B33 11 A1B33 C9 C10 C 0 1 N N N N N N 11.847 14.539 22.663 1.558 -1.395 -1.718 C9 A1B33 12 A1B33 N N2 N 0 1 N N N N N N 9.409 14.216 22.269 0.792 -0.568 0.447 N A1B33 13 A1B33 O O2 O 0 1 N N N N N N 7.555 13.135 21.566 -0.242 1.031 1.591 O A1B33 14 A1B33 C1 C11 C 0 1 Y N N N N N 8.965 11.317 23.844 -2.632 0.273 -0.013 C1 A1B33 15 A1B33 S S1 S 0 1 N N N N N N 10.192 10.875 22.646 -2.294 1.966 -0.368 S A1B33 16 A1B33 C C12 C 0 1 N N N N N N 10.234 9.052 22.708 -3.848 2.547 -1.102 C A1B33 17 A1B33 C3 C13 C 0 1 Y N N N N N 7.654 10.830 25.803 -4.137 -1.595 -0.037 C3 A1B33 18 A1B33 C2 C14 C 0 1 Y N N N N N 8.616 10.458 24.880 -3.876 -0.269 -0.315 C2 A1B33 19 A1B33 H15 H1 H 0 1 N N N N N N 11.391 14.906 17.062 5.487 1.854 1.071 H15 A1B33 20 A1B33 H14 H2 H 0 1 N N N N N N 11.748 13.675 18.228 3.836 2.164 1.114 H14 A1B33 21 A1B33 H6 H3 H 0 1 N N N N N N 6.324 12.360 26.466 -3.387 -3.428 0.772 H6 A1B33 22 A1B33 H7 H4 H 0 1 N N N N N N 6.885 13.895 24.621 -1.180 -2.500 1.319 H7 A1B33 23 A1B33 H8 H5 H 0 1 N N N N N N 10.230 15.592 23.634 -0.331 -1.853 -0.781 H8 A1B33 24 A1B33 H9 H6 H 0 1 N N N N N N 10.384 13.864 24.101 1.081 -2.605 0.004 H9 A1B33 25 A1B33 H12 H7 H 0 1 N N N N N N 11.732 16.364 21.502 3.596 -0.853 -2.157 H12 A1B33 26 A1B33 H13 H8 H 0 1 N N N N N N 12.917 15.163 20.886 3.403 -1.885 -0.720 H13 A1B33 27 A1B33 H16 H9 H 0 1 N N N N N N 9.369 16.043 21.221 2.611 -0.863 1.461 H16 A1B33 28 A1B33 H17 H10 H 0 1 N N N N N N 8.704 14.634 20.328 2.016 0.816 1.454 H17 A1B33 29 A1B33 H H11 H 0 1 N N N N N N 11.014 13.658 20.263 2.511 1.026 -0.936 H A1B33 30 A1B33 H10 H12 H 0 1 N N N N N N 12.548 15.003 23.372 1.581 -2.267 -2.371 H10 A1B33 31 A1B33 H11 H13 H 0 1 N N N N N N 12.135 13.491 22.496 1.127 -0.549 -2.254 H11 A1B33 32 A1B33 H2 H14 H 0 1 N N N N N N 10.977 8.677 21.989 -4.658 2.423 -0.383 H2 A1B33 33 A1B33 H1 H15 H 0 1 N N N N N N 10.509 8.726 23.722 -3.754 3.601 -1.365 H1 A1B33 34 A1B33 H3 H16 H 0 1 N N N N N N 9.241 8.654 22.451 -4.066 1.967 -1.998 H3 A1B33 35 A1B33 H5 H17 H 0 1 N N N N N N 7.376 10.148 26.593 -5.105 -2.012 -0.274 H5 A1B33 36 A1B33 H4 H18 H 0 1 N N N N N N 9.098 9.495 24.965 -4.636 0.346 -0.772 H4 A1B33 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B33 C S SING N N 1 A1B33 S C1 SING N N 2 A1B33 C1 C2 DOUB Y N 3 A1B33 C2 C3 SING Y N 4 A1B33 C3 C4 DOUB Y N 5 A1B33 C4 C5 SING Y N 6 A1B33 C5 C6 DOUB Y N 7 A1B33 C1 C6 SING Y N 8 A1B33 C6 C7 SING N N 9 A1B33 O C7 DOUB N N 10 A1B33 C7 N SING N N 11 A1B33 N C8 SING N N 12 A1B33 C8 C9 SING N N 13 A1B33 C9 C10 SING N N 14 A1B33 C10 C11 SING N N 15 A1B33 C11 C12 SING N N 16 A1B33 N1 C12 SING N N 17 A1B33 C12 O1 DOUB N N 18 A1B33 C13 C11 SING N N 19 A1B33 N C13 SING N N 20 A1B33 N1 H15 SING N N 21 A1B33 N1 H14 SING N N 22 A1B33 C4 H6 SING N N 23 A1B33 C5 H7 SING N N 24 A1B33 C8 H8 SING N N 25 A1B33 C8 H9 SING N N 26 A1B33 C10 H12 SING N N 27 A1B33 C10 H13 SING N N 28 A1B33 C13 H16 SING N N 29 A1B33 C13 H17 SING N N 30 A1B33 C11 H SING N N 31 A1B33 C9 H10 SING N N 32 A1B33 C9 H11 SING N N 33 A1B33 C H2 SING N N 34 A1B33 C H1 SING N N 35 A1B33 C H3 SING N N 36 A1B33 C3 H5 SING N N 37 A1B33 C2 H4 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B33 SMILES ACDLabs 14.52 "O=C(c1ccccc1SC)N1CCCC(C1)C(N)=O" A1B33 InChI InChI 1.06 "InChI=1S/C14H18N2O2S/c1-19-12-7-3-2-6-11(12)14(18)16-8-4-5-10(9-16)13(15)17/h2-3,6-7,10H,4-5,8-9H2,1H3,(H2,15,17)/t10-/m0/s1" A1B33 InChIKey InChI 1.06 YOUXGCKURFHYGE-JTQLQIEISA-N A1B33 SMILES_CANONICAL CACTVS 3.385 "CSc1ccccc1C(=O)N2CCC[C@@H](C2)C(N)=O" A1B33 SMILES CACTVS 3.385 "CSc1ccccc1C(=O)N2CCC[CH](C2)C(N)=O" A1B33 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CSc1ccccc1C(=O)N2CCC[C@@H](C2)C(=O)N" A1B33 SMILES "OpenEye OEToolkits" 3.1.0.0 "CSc1ccccc1C(=O)N2CCCC(C2)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B33 "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-1-[2-(methylsulfanyl)benzoyl]piperidine-3-carboxamide" A1B33 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-1-(2-methylsulfanylphenyl)carbonylpiperidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B33 "Create component" 2025-03-21 RCSB A1B33 "Initial release" 2025-04-02 RCSB #