data_A1B3H # _chem_comp.id A1B3H _chem_comp.name "6-{[2-(methylsulfanyl)phenyl]acetyl}-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidin-4(3H)-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H17 N3 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-21 _chem_comp.pdbx_modified_date 2025-03-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 315.390 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B3H _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I50 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B3H N1 N1 N 0 1 N N N N N N 2.142 15.908 23.743 -4.816 -0.661 -0.945 N1 A1B3H 1 A1B3H C4 C1 C 0 1 Y N N N N N 6.196 13.279 26.021 3.908 -2.657 0.537 C4 A1B3H 2 A1B3H C5 C2 C 0 1 Y N N N N N 6.738 14.315 25.291 2.629 -2.146 0.669 C5 A1B3H 3 A1B3H C6 C3 C 0 1 Y N N N N N 7.623 14.082 24.241 2.411 -0.788 0.553 C6 A1B3H 4 A1B3H C7 C4 C 0 1 N N N N N N 8.033 15.253 23.379 1.017 -0.233 0.696 C7 A1B3H 5 A1B3H C8 C5 C 0 1 N N N N N N 7.151 15.359 22.151 0.392 -0.085 -0.668 C8 A1B3H 6 A1B3H C10 C6 C 0 1 N N N N N N 4.464 16.463 24.120 -2.713 -0.377 -2.150 C10 A1B3H 7 A1B3H C13 C7 C 0 1 N N N N N N 2.494 15.780 20.909 -3.902 0.333 1.385 C13 A1B3H 8 A1B3H C15 C8 C 0 1 N N N N N N 5.005 16.096 21.205 -1.645 0.787 0.391 C15 A1B3H 9 A1B3H O1 O1 O 0 1 N N N N N N 2.533 15.823 19.675 -3.493 0.781 2.443 O1 A1B3H 10 A1B3H N2 N2 N 0 1 N N N N N N 1.290 15.615 21.566 -5.170 -0.111 1.272 N2 A1B3H 11 A1B3H C12 C9 C 0 1 N N N N N N 1.165 15.675 22.908 -5.601 -0.600 0.093 C12 A1B3H 12 A1B3H C14 C10 C 0 1 N N N N N N 3.617 16.000 21.789 -3.053 0.272 0.255 C14 A1B3H 13 A1B3H C11 C11 C 0 1 N N N N N N 3.387 16.082 23.150 -3.539 -0.244 -0.899 C11 A1B3H 14 A1B3H C9 C12 C 0 1 N N N N N N 5.700 16.977 23.388 -1.501 0.553 -2.103 C9 A1B3H 15 A1B3H N N3 N 0 1 N N N N N N 6.028 16.111 22.248 -0.861 0.396 -0.786 N A1B3H 16 A1B3H O O2 O 0 1 N N N N N N 7.453 14.772 21.126 1.017 -0.400 -1.658 O A1B3H 17 A1B3H C1 C13 C 0 1 Y N N N N N 8.000 12.759 23.978 3.478 0.067 0.304 C1 A1B3H 18 A1B3H S S1 S 0 1 N N N N N N 9.080 12.393 22.623 3.203 1.800 0.148 S A1B3H 19 A1B3H C C14 C 0 1 N N N N N N 9.559 10.689 22.897 4.866 2.450 -0.171 C A1B3H 20 A1B3H C3 C15 C 0 1 Y N N N N N 6.558 11.998 25.750 4.973 -1.809 0.296 C3 A1B3H 21 A1B3H C2 C16 C 0 1 Y N N N N N 7.475 11.729 24.748 4.761 -0.449 0.173 C2 A1B3H 22 A1B3H H6 H1 H 0 1 N N N N N N 5.485 13.485 26.807 4.076 -3.720 0.629 H6 A1B3H 23 A1B3H H7 H2 H 0 1 N N N N N N 6.470 15.331 25.539 1.800 -2.811 0.862 H7 A1B3H 24 A1B3H H8 H3 H 0 1 N N N N N N 7.946 16.179 23.966 0.415 -0.913 1.299 H8 A1B3H 25 A1B3H H9 H4 H 0 1 N N N N N N 9.077 15.117 23.061 1.062 0.742 1.182 H9 A1B3H 26 A1B3H H13 H5 H 0 1 N N N N N N 4.740 15.581 24.717 -2.370 -1.408 -2.245 H13 A1B3H 27 A1B3H H12 H6 H 0 1 N N N N N N 4.086 17.252 24.786 -3.326 -0.123 -3.014 H12 A1B3H 28 A1B3H H16 H7 H 0 1 N N N N N N 5.177 15.230 20.549 -1.662 1.873 0.472 H16 A1B3H 29 A1B3H H15 H8 H 0 1 N N N N N N 5.081 17.022 20.617 -1.189 0.363 1.286 H15 A1B3H 30 A1B3H H H9 H 0 1 N N N N N N 0.470 15.443 21.020 -5.767 -0.080 2.036 H A1B3H 31 A1B3H H14 H10 H 0 1 N N N N N N 0.181 15.518 23.324 -6.620 -0.947 0.005 H14 A1B3H 32 A1B3H H10 H11 H 0 1 N N N N N N 6.551 16.994 24.085 -0.797 0.282 -2.890 H10 A1B3H 33 A1B3H H11 H12 H 0 1 N N N N N N 5.505 17.996 23.023 -1.824 1.586 -2.237 H11 A1B3H 34 A1B3H H1 H13 H 0 1 N N N N N N 10.240 10.366 22.096 5.261 2.005 -1.084 H1 A1B3H 35 A1B3H H2 H14 H 0 1 N N N N N N 10.069 10.603 23.868 4.818 3.533 -0.286 H2 A1B3H 36 A1B3H H3 H15 H 0 1 N N N N N N 8.663 10.052 22.896 5.520 2.203 0.666 H3 A1B3H 37 A1B3H H5 H16 H 0 1 N N N N N N 6.129 11.186 26.318 5.970 -2.210 0.194 H5 A1B3H 38 A1B3H H4 H17 H 0 1 N N N N N N 7.784 10.711 24.564 5.593 0.212 -0.021 H4 A1B3H 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B3H C S SING N N 1 A1B3H S C1 SING N N 2 A1B3H C1 C2 DOUB Y N 3 A1B3H C2 C3 SING Y N 4 A1B3H C3 C4 DOUB Y N 5 A1B3H C4 C5 SING Y N 6 A1B3H C5 C6 DOUB Y N 7 A1B3H C1 C6 SING Y N 8 A1B3H C6 C7 SING N N 9 A1B3H C7 C8 SING N N 10 A1B3H O C8 DOUB N N 11 A1B3H C8 N SING N N 12 A1B3H N C9 SING N N 13 A1B3H C9 C10 SING N N 14 A1B3H C10 C11 SING N N 15 A1B3H C11 N1 SING N N 16 A1B3H N1 C12 DOUB N N 17 A1B3H C12 N2 SING N N 18 A1B3H N2 C13 SING N N 19 A1B3H C13 O1 DOUB N N 20 A1B3H C14 C13 SING N N 21 A1B3H C11 C14 DOUB N N 22 A1B3H C15 C14 SING N N 23 A1B3H N C15 SING N N 24 A1B3H C4 H6 SING N N 25 A1B3H C5 H7 SING N N 26 A1B3H C7 H8 SING N N 27 A1B3H C7 H9 SING N N 28 A1B3H C10 H13 SING N N 29 A1B3H C10 H12 SING N N 30 A1B3H C15 H16 SING N N 31 A1B3H C15 H15 SING N N 32 A1B3H N2 H SING N N 33 A1B3H C12 H14 SING N N 34 A1B3H C9 H10 SING N N 35 A1B3H C9 H11 SING N N 36 A1B3H C H1 SING N N 37 A1B3H C H2 SING N N 38 A1B3H C H3 SING N N 39 A1B3H C3 H5 SING N N 40 A1B3H C2 H4 SING N N 41 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B3H SMILES ACDLabs 14.52 "CSc1ccccc1CC(=O)N1CCC=2N=CNC(=O)C=2C1" A1B3H InChI InChI 1.06 "InChI=1S/C16H17N3O2S/c1-22-14-5-3-2-4-11(14)8-15(20)19-7-6-13-12(9-19)16(21)18-10-17-13/h2-5,10H,6-9H2,1H3,(H,17,18,21)" A1B3H InChIKey InChI 1.06 AETMPRGAEUVJPB-UHFFFAOYSA-N A1B3H SMILES_CANONICAL CACTVS 3.385 "CSc1ccccc1CC(=O)N2CCC3=C(C2)C(=O)NC=N3" A1B3H SMILES CACTVS 3.385 "CSc1ccccc1CC(=O)N2CCC3=C(C2)C(=O)NC=N3" A1B3H SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CSc1ccccc1CC(=O)N2CCC3=C(C2)C(=O)NC=N3" A1B3H SMILES "OpenEye OEToolkits" 3.1.0.0 "CSc1ccccc1CC(=O)N2CCC3=C(C2)C(=O)NC=N3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B3H "SYSTEMATIC NAME" ACDLabs 14.52 "6-{[2-(methylsulfanyl)phenyl]acetyl}-5,6,7,8-tetrahydropyrido[4,3-d]pyrimidin-4(3H)-one" A1B3H "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "6-[2-(2-methylsulfanylphenyl)ethanoyl]-3,5,7,8-tetrahydropyrido[4,3-d]pyrimidin-4-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B3H "Create component" 2025-03-21 RCSB A1B3H "Initial release" 2025-04-02 RCSB #