data_A1B3P
#
_chem_comp.id A1B3P
_chem_comp.name "1-[(3R)-3-hydroxy-3-(1H-1,2,3-triazol-4-yl)pyrrolidin-1-yl]-2-[2-(methylsulfanyl)phenyl]ethan-1-one"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C15 H18 N4 O2 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2025-03-21
_chem_comp.pdbx_modified_date 2025-03-28
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 318.394
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code A1B3P
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7I58
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
_chem_comp.pdbx_pcm ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
A1B3P N1 N1 N 0 1 Y N N N N N 10.394 16.061 17.913 6.323 -0.726 0.394 N1 A1B3P 1
A1B3P N3 N2 N 0 1 Y N N N N N 11.946 14.743 18.553 4.360 -1.013 1.114 N3 A1B3P 2
A1B3P C4 C1 C 0 1 Y N N N N N 6.806 11.500 26.504 -4.451 -2.584 -0.238 C4 A1B3P 3
A1B3P C5 C2 C 0 1 Y N N N N N 7.119 12.583 25.704 -3.259 -2.115 -0.760 C5 A1B3P 4
A1B3P C6 C3 C 0 1 Y N N N N N 8.039 12.473 24.662 -2.921 -0.783 -0.623 C6 A1B3P 5
A1B3P C7 C4 C 0 1 N N N N N N 8.386 13.702 23.851 -1.622 -0.272 -1.192 C7 A1B3P 6
A1B3P C8 C5 C 0 1 N N N N N N 9.727 14.299 24.249 -0.567 -0.279 -0.116 C8 A1B3P 7
A1B3P C10 C6 C 0 1 N N N N N N 12.360 15.536 21.995 2.683 0.384 -1.695 C10 A1B3P 8
A1B3P C13 C7 C 0 1 Y N N N N N 10.277 16.013 19.244 5.536 0.156 -0.264 C13 A1B3P 9
A1B3P O O1 O 0 1 N N N N N N 10.021 14.460 25.431 -0.842 -0.660 1.001 O A1B3P 10
A1B3P C3 C8 C 0 1 Y N N N N N 7.386 10.279 26.266 -5.312 -1.721 0.415 C3 A1B3P 11
A1B3P C2 C9 C 0 1 Y N N N N N 8.283 10.126 25.221 -4.983 -0.387 0.550 C2 A1B3P 12
A1B3P C1 C10 C 0 1 Y N N N N N 8.627 11.221 24.428 -3.781 0.086 0.038 C1 A1B3P 13
A1B3P S S1 S 0 1 N N N N N N 9.842 11.120 23.147 -3.357 1.788 0.208 S A1B3P 14
A1B3P C C11 C 0 1 N N N N N N 10.203 9.373 23.015 -4.780 2.476 1.099 C A1B3P 15
A1B3P N N3 N 0 1 N N N N N N 10.565 14.636 23.239 0.683 0.140 -0.397 N A1B3P 16
A1B3P C14 C12 C 0 1 N N N N N N 10.194 14.599 21.823 1.805 0.186 0.553 C14 A1B3P 17
A1B3P C11 C13 C 0 1 N N R N N N 11.508 14.650 21.080 3.037 0.704 -0.219 C11 A1B3P 18
A1B3P O1 O2 O 0 1 N N N N N N 12.093 13.347 21.004 3.197 2.111 -0.030 O1 A1B3P 19
A1B3P C9 C14 C 0 1 N N N N N N 11.950 15.110 23.406 1.153 0.627 -1.707 C9 A1B3P 20
A1B3P C12 C15 C 0 1 Y N N N N N 11.261 15.161 19.661 4.280 -0.036 0.204 C12 A1B3P 21
A1B3P N2 N4 N 0 1 Y N N N N N 11.405 15.292 17.483 5.583 -1.400 1.204 N2 A1B3P 22
A1B3P H H1 H 0 1 N N N N N N 9.803 16.602 17.314 7.279 -0.834 0.275 H A1B3P 23
A1B3P H6 H2 H 0 1 N N N N N N 6.104 11.615 27.317 -4.713 -3.626 -0.346 H6 A1B3P 24
A1B3P H7 H3 H 0 1 N N N N N N 6.641 13.534 25.890 -2.592 -2.790 -1.274 H7 A1B3P 25
A1B3P H9 H4 H 0 1 N N N N N N 8.425 13.424 22.787 -1.308 -0.915 -2.014 H9 A1B3P 26
A1B3P H8 H5 H 0 1 N N N N N N 7.603 14.459 24.004 -1.761 0.745 -1.559 H8 A1B3P 27
A1B3P H12 H6 H 0 1 N N N N N N 12.137 16.600 21.827 3.192 1.067 -2.375 H12 A1B3P 28
A1B3P H13 H7 H 0 1 N N N N N N 13.432 15.355 21.828 2.917 -0.652 -1.937 H13 A1B3P 29
A1B3P H15 H8 H 0 1 N N N N N N 9.559 16.536 19.858 5.847 0.870 -1.013 H15 A1B3P 30
A1B3P H5 H9 H 0 1 N N N N N N 7.143 9.435 26.895 -6.242 -2.091 0.821 H5 A1B3P 31
A1B3P H4 H10 H 0 1 N N N N N N 8.717 9.157 25.020 -5.655 0.287 1.061 H4 A1B3P 32
A1B3P H2 H11 H 0 1 N N N N N N 10.959 9.212 22.232 -4.885 1.972 2.060 H2 A1B3P 33
A1B3P H1 H12 H 0 1 N N N N N N 10.588 9.005 23.977 -4.625 3.542 1.263 H1 A1B3P 34
A1B3P H3 H13 H 0 1 N N N N N N 9.284 8.827 22.755 -5.684 2.326 0.510 H3 A1B3P 35
A1B3P H16 H14 H 0 1 N N N N N N 9.568 15.465 21.563 1.569 0.864 1.373 H16 A1B3P 36
A1B3P H17 H15 H 0 1 N N N N N N 9.652 13.671 21.588 2.002 -0.813 0.942 H17 A1B3P 37
A1B3P H14 H16 H 0 1 N N N N N N 11.567 12.796 20.437 3.910 2.500 -0.554 H14 A1B3P 38
A1B3P H10 H17 H 0 1 N N N N N N 11.992 15.962 24.101 0.938 1.690 -1.816 H10 A1B3P 39
A1B3P H11 H18 H 0 1 N N N N N N 12.599 14.303 23.776 0.685 0.060 -2.512 H11 A1B3P 40
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A1B3P C S SING N N 1
A1B3P S C1 SING N N 2
A1B3P C1 C2 DOUB Y N 3
A1B3P C2 C3 SING Y N 4
A1B3P C3 C4 DOUB Y N 5
A1B3P C4 C5 SING Y N 6
A1B3P C5 C6 DOUB Y N 7
A1B3P C1 C6 SING Y N 8
A1B3P C6 C7 SING N N 9
A1B3P C7 C8 SING N N 10
A1B3P C8 O DOUB N N 11
A1B3P N C8 SING N N 12
A1B3P N C9 SING N N 13
A1B3P C9 C10 SING N N 14
A1B3P C10 C11 SING N N 15
A1B3P O1 C11 SING N N 16
A1B3P C12 C11 SING N N 17
A1B3P C12 C13 DOUB Y N 18
A1B3P C13 N1 SING Y N 19
A1B3P N1 N2 SING Y N 20
A1B3P N2 N3 DOUB Y N 21
A1B3P N3 C12 SING Y N 22
A1B3P C11 C14 SING N N 23
A1B3P C14 N SING N N 24
A1B3P N1 H SING N N 25
A1B3P C4 H6 SING N N 26
A1B3P C5 H7 SING N N 27
A1B3P C7 H9 SING N N 28
A1B3P C7 H8 SING N N 29
A1B3P C10 H12 SING N N 30
A1B3P C10 H13 SING N N 31
A1B3P C13 H15 SING N N 32
A1B3P C3 H5 SING N N 33
A1B3P C2 H4 SING N N 34
A1B3P C H2 SING N N 35
A1B3P C H1 SING N N 36
A1B3P C H3 SING N N 37
A1B3P C14 H16 SING N N 38
A1B3P C14 H17 SING N N 39
A1B3P O1 H14 SING N N 40
A1B3P C9 H10 SING N N 41
A1B3P C9 H11 SING N N 42
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
A1B3P SMILES ACDLabs 14.52 "CSc1ccccc1CC(=O)N1CCC(O)(C1)c1c[NH]nn1"
A1B3P InChI InChI 1.06 "InChI=1S/C15H18N4O2S/c1-22-12-5-3-2-4-11(12)8-14(20)19-7-6-15(21,10-19)13-9-16-18-17-13/h2-5,9,21H,6-8,10H2,1H3,(H,16,17,18)/t15-/m1/s1"
A1B3P InChIKey InChI 1.06 SBDJWGHKLQGOOQ-OAHLLOKOSA-N
A1B3P SMILES_CANONICAL CACTVS 3.385 "CSc1ccccc1CC(=O)N2CC[C@@](O)(C2)c3c[nH]nn3"
A1B3P SMILES CACTVS 3.385 "CSc1ccccc1CC(=O)N2CC[C](O)(C2)c3c[nH]nn3"
A1B3P SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CSc1ccccc1CC(=O)N2CC[C@@](C2)(c3c[nH]nn3)O"
A1B3P SMILES "OpenEye OEToolkits" 3.1.0.0 "CSc1ccccc1CC(=O)N2CCC(C2)(c3c[nH]nn3)O"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
A1B3P "SYSTEMATIC NAME" ACDLabs 14.52 "1-[(3R)-3-hydroxy-3-(1H-1,2,3-triazol-4-yl)pyrrolidin-1-yl]-2-[2-(methylsulfanyl)phenyl]ethan-1-one"
A1B3P "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "2-(2-methylsulfanylphenyl)-1-[(3~{R})-3-oxidanyl-3-(1~{H}-1,2,3-triazol-4-yl)pyrrolidin-1-yl]ethanone"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
A1B3P "Create component" 2025-03-21 RCSB
A1B3P "Initial release" 2025-04-02 RCSB
#