data_A1B3Q # _chem_comp.id A1B3Q _chem_comp.name "(3S)-1-[(3S)-2,3-dihydro-1-benzothiophene-3-carbonyl]piperidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H18 N2 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-21 _chem_comp.pdbx_modified_date 2025-03-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 290.381 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B3Q _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I59 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B3Q N1 N1 N 0 1 N N N N N N 25.595 13.891 10.686 1.101 0.449 -0.020 N1 A1B3Q 1 A1B3Q C4 C1 C 0 1 N N N N N N 24.626 14.536 9.780 1.353 1.699 0.709 C4 A1B3Q 2 A1B3Q C5 C2 C 0 1 N N N N N N 26.461 12.913 10.337 -0.131 -0.099 -0.038 C5 A1B3Q 3 A1B3Q C6 C3 C 0 1 N N S N N N 26.349 12.302 8.942 -1.265 0.572 0.694 C6 A1B3Q 4 A1B3Q C7 C4 C 0 1 N N N N N N 27.697 12.313 8.200 -1.498 1.973 0.095 C7 A1B3Q 5 A1B3Q C8 C5 C 0 1 Y N N N N N 26.763 9.949 8.366 -3.412 0.144 -0.405 C8 A1B3Q 6 A1B3Q C10 C6 C 0 1 Y N N N N N 25.558 8.092 9.288 -4.890 -1.673 0.115 C10 A1B3Q 7 A1B3Q C13 C7 C 0 1 Y N N N N N 26.026 10.836 9.153 -2.509 -0.271 0.566 C13 A1B3Q 8 A1B3Q O1 O1 O 0 1 N N N N N N 27.300 12.494 11.118 -0.326 -1.132 -0.643 O1 A1B3Q 9 A1B3Q C3 C8 C 0 1 N N N N N N 23.207 14.419 10.320 2.522 1.480 1.674 C3 A1B3Q 10 A1B3Q C2 C9 C 0 1 N N N N N N 23.137 14.902 11.773 3.729 0.951 0.896 C2 A1B3Q 11 A1B3Q C14 C10 C 0 1 N N N N N N 25.548 14.382 12.066 2.215 -0.191 -0.733 C14 A1B3Q 12 A1B3Q C1 C11 C 0 1 N N S N N N 24.154 14.152 12.652 3.375 -0.392 0.253 C1 A1B3Q 13 A1B3Q C C12 C 0 1 N N N N N N 24.121 14.630 14.094 4.575 -0.927 -0.487 C A1B3Q 14 A1B3Q O O2 O 0 1 N N N N N N 24.492 15.763 14.395 4.509 -1.133 -1.680 O A1B3Q 15 A1B3Q N N2 N 0 1 N N N N N N 23.719 13.745 14.991 5.720 -1.176 0.178 N A1B3Q 16 A1B3Q S S1 S 0 1 N N N N N N 28.021 10.720 7.409 -2.766 1.606 -1.176 S A1B3Q 17 A1B3Q C12 C13 C 0 1 Y N N N N N 25.035 10.327 9.990 -2.830 -1.407 1.311 C12 A1B3Q 18 A1B3Q C11 C14 C 0 1 Y N N N N N 24.798 8.964 10.049 -4.003 -2.095 1.087 C11 A1B3Q 19 A1B3Q C9 C15 C 0 1 Y N N N N N 26.541 8.576 8.438 -4.591 -0.551 -0.632 C9 A1B3Q 20 A1B3Q H9 H1 H 0 1 N N N N N N 24.677 14.049 8.795 1.606 2.489 0.002 H9 A1B3Q 21 A1B3Q H8 H2 H 0 1 N N N N N N 24.884 15.600 9.677 0.462 1.982 1.269 H8 A1B3Q 22 A1B3Q H1 H3 H 0 1 N N N N N N 25.569 12.803 8.350 -1.005 0.670 1.748 H1 A1B3Q 23 A1B3Q H11 H4 H 0 1 N N N N N N 27.676 13.098 7.430 -1.884 2.662 0.847 H11 A1B3Q 24 A1B3Q H10 H5 H 0 1 N N N N N N 28.501 12.526 8.920 -0.587 2.362 -0.360 H10 A1B3Q 25 A1B3Q H13 H6 H 0 1 N N N N N N 25.384 7.028 9.357 -5.807 -2.216 -0.060 H13 A1B3Q 26 A1B3Q H7 H7 H 0 1 N N N N N N 22.889 13.367 10.274 2.783 2.425 2.151 H7 A1B3Q 27 A1B3Q H6 H8 H 0 1 N N N N N N 22.534 15.033 9.703 2.234 0.756 2.436 H6 A1B3Q 28 A1B3Q H5 H9 H 0 1 N N N N N N 22.124 14.724 12.163 4.001 1.666 0.118 H5 A1B3Q 29 A1B3Q H4 H10 H 0 1 N N N N N N 23.358 15.979 11.805 4.570 0.818 1.576 H4 A1B3Q 30 A1B3Q H17 H11 H 0 1 N N N N N N 26.292 13.842 12.671 1.893 -1.157 -1.123 H17 A1B3Q 31 A1B3Q H16 H12 H 0 1 N N N N N N 25.776 15.458 12.078 2.535 0.447 -1.557 H16 A1B3Q 32 A1B3Q H H13 H 0 1 N N N N N N 23.926 13.076 12.623 3.079 -1.099 1.028 H A1B3Q 33 A1B3Q H3 H14 H 0 1 N N N N N N 23.708 13.986 15.961 5.773 -1.011 1.133 H3 A1B3Q 34 A1B3Q H2 H15 H 0 1 N N N N N N 23.426 12.835 14.699 6.492 -1.521 -0.298 H2 A1B3Q 35 A1B3Q H15 H16 H 0 1 N N N N N N 24.448 11.000 10.597 -2.149 -1.751 2.075 H15 A1B3Q 36 A1B3Q H14 H17 H 0 1 N N N N N N 24.018 8.580 10.690 -4.231 -2.970 1.677 H14 A1B3Q 37 A1B3Q H12 H18 H 0 1 N N N N N N 27.128 7.896 7.839 -5.278 -0.213 -1.395 H12 A1B3Q 38 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B3Q N C SING N N 1 A1B3Q O C DOUB N N 2 A1B3Q C C1 SING N N 3 A1B3Q C1 C2 SING N N 4 A1B3Q C2 C3 SING N N 5 A1B3Q C3 C4 SING N N 6 A1B3Q C4 N1 SING N N 7 A1B3Q N1 C5 SING N N 8 A1B3Q C5 O1 DOUB N N 9 A1B3Q C6 C5 SING N N 10 A1B3Q C6 C7 SING N N 11 A1B3Q C7 S SING N N 12 A1B3Q S C8 SING N N 13 A1B3Q C8 C9 DOUB Y N 14 A1B3Q C9 C10 SING Y N 15 A1B3Q C10 C11 DOUB Y N 16 A1B3Q C11 C12 SING Y N 17 A1B3Q C12 C13 DOUB Y N 18 A1B3Q C8 C13 SING Y N 19 A1B3Q C13 C6 SING N N 20 A1B3Q C14 N1 SING N N 21 A1B3Q C1 C14 SING N N 22 A1B3Q C4 H9 SING N N 23 A1B3Q C4 H8 SING N N 24 A1B3Q C6 H1 SING N N 25 A1B3Q C7 H11 SING N N 26 A1B3Q C7 H10 SING N N 27 A1B3Q C10 H13 SING N N 28 A1B3Q C3 H7 SING N N 29 A1B3Q C3 H6 SING N N 30 A1B3Q C2 H5 SING N N 31 A1B3Q C2 H4 SING N N 32 A1B3Q C14 H17 SING N N 33 A1B3Q C14 H16 SING N N 34 A1B3Q C1 H SING N N 35 A1B3Q N H3 SING N N 36 A1B3Q N H2 SING N N 37 A1B3Q C12 H15 SING N N 38 A1B3Q C11 H14 SING N N 39 A1B3Q C9 H12 SING N N 40 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B3Q SMILES ACDLabs 14.52 "NC(=O)C1CCCN(C1)C(=O)C1CSc2ccccc21" A1B3Q InChI InChI 1.06 "InChI=1S/C15H18N2O2S/c16-14(18)10-4-3-7-17(8-10)15(19)12-9-20-13-6-2-1-5-11(12)13/h1-2,5-6,10,12H,3-4,7-9H2,(H2,16,18)/t10-,12-/m0/s1" A1B3Q InChIKey InChI 1.06 BHNNBJPWVZNUPG-JQWIXIFHSA-N A1B3Q SMILES_CANONICAL CACTVS 3.385 "NC(=O)[C@H]1CCCN(C1)C(=O)[C@H]2CSc3ccccc23" A1B3Q SMILES CACTVS 3.385 "NC(=O)[CH]1CCCN(C1)C(=O)[CH]2CSc3ccccc23" A1B3Q SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1ccc2c(c1)[C@H](CS2)C(=O)N3CCC[C@@H](C3)C(=O)N" A1B3Q SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccc2c(c1)C(CS2)C(=O)N3CCCC(C3)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B3Q "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-1-[(3S)-2,3-dihydro-1-benzothiophene-3-carbonyl]piperidine-3-carboxamide" A1B3Q "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-1-[[(3~{S})-2,3-dihydro-1-benzothiophen-3-yl]carbonyl]piperidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B3Q "Create component" 2025-03-21 RCSB A1B3Q "Initial release" 2025-04-02 RCSB #