data_A1B3V # _chem_comp.id A1B3V _chem_comp.name "(3S)-1-{[4-(methylsulfanyl)pyridin-3-yl]acetyl}piperidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H19 N3 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-21 _chem_comp.pdbx_modified_date 2025-03-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 293.385 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B3V _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I5E _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B3V N1 N1 N 0 1 N N N N N N 25.284 13.768 10.559 1.304 0.906 0.357 N1 A1B3V 1 A1B3V C4 C1 C 0 1 Y N N N N N 27.756 11.268 7.389 -3.091 1.988 -0.203 C4 A1B3V 2 A1B3V C5 C2 C 0 1 Y N N N N N 26.673 11.168 8.241 -2.422 0.874 0.256 C5 A1B3V 3 A1B3V C6 C3 C 0 1 N N N N N N 25.883 12.393 8.641 -1.094 1.013 0.954 C6 A1B3V 4 A1B3V C7 C4 C 0 1 N N N N N N 26.063 12.764 10.100 0.020 0.824 -0.043 C7 A1B3V 5 A1B3V C8 C5 C 0 1 N N N N N N 24.293 14.494 9.749 1.635 1.179 1.762 C8 A1B3V 6 A1B3V C10 C6 C 0 1 N N N N N N 22.922 14.841 11.821 3.798 0.003 1.341 C10 A1B3V 7 A1B3V C13 C7 C 0 1 N N N N N N 25.366 14.184 11.963 2.401 0.718 -0.603 C13 A1B3V 8 A1B3V O1 O1 O 0 1 N N N N N N 24.523 15.670 14.334 5.653 -0.286 -0.534 O1 A1B3V 9 A1B3V C12 C8 C 0 1 N N N N N N 24.054 14.555 14.059 4.541 -0.483 -0.975 C12 A1B3V 10 A1B3V N2 N2 N 0 1 N N N N N N 23.655 13.700 14.978 4.378 -0.804 -2.274 N2 A1B3V 11 A1B3V C11 C9 C 0 1 N N S N N N 23.982 14.064 12.623 3.340 -0.369 -0.071 C11 A1B3V 12 A1B3V C9 C10 C 0 1 N N N N N N 22.905 14.411 10.349 2.582 0.087 2.267 C9 A1B3V 13 A1B3V O O2 O 0 1 N N N N N N 26.911 12.231 10.795 -0.239 0.598 -1.206 O A1B3V 14 A1B3V C1 C11 C 0 1 Y N N N N N 26.300 9.873 8.625 -2.993 -0.386 0.066 C1 A1B3V 15 A1B3V S S1 S 0 1 N N N N N N 24.913 9.682 9.706 -2.179 -1.842 0.634 S A1B3V 16 A1B3V C C12 C 0 1 N N N N N N 24.736 7.902 9.878 -3.320 -3.164 0.145 C A1B3V 17 A1B3V N N3 N 0 1 Y N N N N N 28.458 10.236 6.915 -4.258 1.875 -0.810 N A1B3V 18 A1B3V C3 C13 C 0 1 Y N N N N N 28.065 9.019 7.289 -4.833 0.702 -1.005 C3 A1B3V 19 A1B3V C2 C14 C 0 1 Y N N N N N 27.008 8.779 8.144 -4.224 -0.462 -0.585 C2 A1B3V 20 A1B3V H6 H1 H 0 1 N N N N N N 28.058 12.258 7.082 -2.657 2.967 -0.060 H6 A1B3V 21 A1B3V H7 H2 H 0 1 N N N N N N 26.212 13.240 8.021 -1.019 2.006 1.398 H7 A1B3V 22 A1B3V H8 H3 H 0 1 N N N N N N 24.816 12.197 8.458 -1.013 0.259 1.736 H8 A1B3V 23 A1B3V H9 H4 H 0 1 N N N N N N 24.591 15.551 9.686 2.122 2.151 1.841 H9 A1B3V 24 A1B3V H10 H5 H 0 1 N N N N N N 24.271 14.058 8.739 0.722 1.176 2.359 H10 A1B3V 25 A1B3V H13 H6 H 0 1 N N N N N N 23.148 15.916 11.877 4.486 -0.756 1.712 H13 A1B3V 26 A1B3V H14 H7 H 0 1 N N N N N N 21.931 14.652 12.260 4.302 0.969 1.316 H14 A1B3V 27 A1B3V H17 H8 H 0 1 N N N N N N 25.706 15.229 12.015 1.995 0.410 -1.566 H17 A1B3V 28 A1B3V H18 H9 H 0 1 N N N N N N 26.081 13.539 12.494 2.951 1.652 -0.717 H18 A1B3V 29 A1B3V H15 H10 H 0 1 N N N N N N 23.724 13.939 15.947 5.151 -0.878 -2.855 H15 A1B3V 30 A1B3V H16 H11 H 0 1 N N N N N N 23.283 12.812 14.707 3.489 -0.962 -2.626 H16 A1B3V 31 A1B3V H H12 H 0 1 N N N N N N 23.696 13.002 12.632 2.814 -1.323 -0.043 H A1B3V 32 A1B3V H11 H13 H 0 1 N N N N N N 22.229 15.073 9.788 2.911 0.330 3.278 H11 A1B3V 33 A1B3V H12 H14 H 0 1 N N N N N N 22.544 13.374 10.280 2.063 -0.871 2.274 H12 A1B3V 34 A1B3V H2 H15 H 0 1 N N N N N N 23.887 7.680 10.542 -4.285 -3.008 0.628 H2 A1B3V 35 A1B3V H3 H16 H 0 1 N N N N N N 24.555 7.454 8.890 -3.449 -3.151 -0.937 H3 A1B3V 36 A1B3V H1 H17 H 0 1 N N N N N N 25.657 7.482 10.308 -2.913 -4.128 0.451 H1 A1B3V 37 A1B3V H5 H18 H 0 1 N N N N N N 28.606 8.169 6.900 -5.788 0.654 -1.506 H5 A1B3V 38 A1B3V H4 H19 H 0 1 N N N N N N 26.740 7.773 8.430 -4.698 -1.418 -0.751 H4 A1B3V 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B3V C S SING N N 1 A1B3V S C1 SING N N 2 A1B3V C1 C2 DOUB Y N 3 A1B3V C2 C3 SING Y N 4 A1B3V C3 N DOUB Y N 5 A1B3V N C4 SING Y N 6 A1B3V C4 C5 DOUB Y N 7 A1B3V C1 C5 SING Y N 8 A1B3V C5 C6 SING N N 9 A1B3V C6 C7 SING N N 10 A1B3V O C7 DOUB N N 11 A1B3V C7 N1 SING N N 12 A1B3V N1 C8 SING N N 13 A1B3V C8 C9 SING N N 14 A1B3V C9 C10 SING N N 15 A1B3V C10 C11 SING N N 16 A1B3V C11 C12 SING N N 17 A1B3V N2 C12 SING N N 18 A1B3V C12 O1 DOUB N N 19 A1B3V C13 C11 SING N N 20 A1B3V N1 C13 SING N N 21 A1B3V C4 H6 SING N N 22 A1B3V C6 H7 SING N N 23 A1B3V C6 H8 SING N N 24 A1B3V C8 H9 SING N N 25 A1B3V C8 H10 SING N N 26 A1B3V C10 H13 SING N N 27 A1B3V C10 H14 SING N N 28 A1B3V C13 H17 SING N N 29 A1B3V C13 H18 SING N N 30 A1B3V N2 H15 SING N N 31 A1B3V N2 H16 SING N N 32 A1B3V C11 H SING N N 33 A1B3V C9 H11 SING N N 34 A1B3V C9 H12 SING N N 35 A1B3V C H2 SING N N 36 A1B3V C H3 SING N N 37 A1B3V C H1 SING N N 38 A1B3V C3 H5 SING N N 39 A1B3V C2 H4 SING N N 40 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B3V SMILES ACDLabs 14.52 "O=C(Cc1cnccc1SC)N1CCCC(C1)C(N)=O" A1B3V InChI InChI 1.06 "InChI=1S/C14H19N3O2S/c1-20-12-4-5-16-8-11(12)7-13(18)17-6-2-3-10(9-17)14(15)19/h4-5,8,10H,2-3,6-7,9H2,1H3,(H2,15,19)/t10-/m0/s1" A1B3V InChIKey InChI 1.06 ZMOITPIXGZHKCC-JTQLQIEISA-N A1B3V SMILES_CANONICAL CACTVS 3.385 "CSc1ccncc1CC(=O)N2CCC[C@@H](C2)C(N)=O" A1B3V SMILES CACTVS 3.385 "CSc1ccncc1CC(=O)N2CCC[CH](C2)C(N)=O" A1B3V SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CSc1ccncc1CC(=O)N2CCC[C@@H](C2)C(=O)N" A1B3V SMILES "OpenEye OEToolkits" 3.1.0.0 "CSc1ccncc1CC(=O)N2CCCC(C2)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B3V "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-1-{[4-(methylsulfanyl)pyridin-3-yl]acetyl}piperidine-3-carboxamide" A1B3V "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-1-[2-(4-methylsulfanylpyridin-3-yl)ethanoyl]piperidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B3V "Create component" 2025-03-21 RCSB A1B3V "Initial release" 2025-04-02 RCSB #