data_A1B4D # _chem_comp.id A1B4D _chem_comp.name "(3S,5S)-5-methyl-1-{[2-(methylsulfanyl)phenyl]acetyl}piperidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H22 N2 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-21 _chem_comp.pdbx_modified_date 2025-03-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 306.423 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B4D _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I5X _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B4D N1 N1 N 0 1 N N N N N N 23.800 13.707 14.957 -3.728 -1.751 -2.201 N1 A1B4D 1 A1B4D C4 C1 C 0 1 Y N N N N N 28.908 10.156 7.138 3.730 1.734 -1.911 C4 A1B4D 2 A1B4D C5 C2 C 0 1 Y N N N N N 28.291 11.287 7.630 2.427 1.295 -1.760 C5 A1B4D 3 A1B4D C6 C3 C 0 1 Y N N N N N 27.144 11.197 8.419 2.142 0.263 -0.887 C6 A1B4D 4 A1B4D C7 C4 C 0 1 N N N N N N 26.457 12.485 8.813 0.723 -0.215 -0.723 C7 A1B4D 5 A1B4D C8 C5 C 0 1 N N N N N N 26.582 12.826 10.292 0.092 0.478 0.457 C8 A1B4D 6 A1B4D C10 C6 C 0 1 N N S N N N 23.554 14.700 10.239 -3.121 1.520 1.484 C10 A1B4D 7 A1B4D C13 C7 C 0 1 N N S N N N 24.290 14.160 12.629 -3.280 -0.100 -0.414 C13 A1B4D 8 A1B4D C15 C8 C 0 1 N N N N N N 25.745 14.211 12.147 -1.972 -0.766 0.026 C15 A1B4D 9 A1B4D O1 O1 O 0 1 N N N N N N 24.678 15.701 14.429 -5.256 -1.371 -0.638 O1 A1B4D 10 A1B4D C14 C9 C 0 1 N N N N N N 24.266 14.594 14.085 -4.159 -1.119 -1.091 C14 A1B4D 11 A1B4D C12 C10 C 0 1 N N N N N N 23.402 15.045 11.735 -4.000 0.461 0.814 C12 A1B4D 12 A1B4D C11 C11 C 0 1 N N N N N N 22.934 13.362 9.888 -2.815 2.636 0.484 C11 A1B4D 13 A1B4D C9 C12 C 0 1 N N N N N N 25.022 14.718 9.853 -1.811 0.873 1.945 C9 A1B4D 14 A1B4D N N2 N 0 1 N N N N N N 25.814 13.851 10.728 -1.183 0.205 0.797 N A1B4D 15 A1B4D O O2 O 0 1 N N N N N N 27.351 12.239 11.041 0.733 1.281 1.102 O A1B4D 16 A1B4D C1 C13 C 0 1 Y N N N N N 26.640 9.923 8.722 3.166 -0.334 -0.161 C1 A1B4D 17 A1B4D S S1 S 0 1 N N N N N N 25.202 9.857 9.753 2.806 -1.646 0.958 S A1B4D 18 A1B4D C C14 C 0 1 N N N N N N 24.906 8.090 9.964 4.435 -2.059 1.640 C A1B4D 19 A1B4D C3 C15 C 0 1 Y N N N N N 28.414 8.913 7.443 4.752 1.139 -1.195 C3 A1B4D 20 A1B4D C2 C16 C 0 1 Y N N N N N 27.282 8.784 8.238 4.473 0.110 -0.316 C2 A1B4D 21 A1B4D H18 H1 H 0 1 N N N N N N 23.776 13.929 15.932 -2.851 -1.550 -2.563 H18 A1B4D 22 A1B4D H19 H2 H 0 1 N N N N N N 23.474 12.817 14.639 -4.293 -2.409 -2.634 H19 A1B4D 23 A1B4D H7 H3 H 0 1 N N N N N N 29.782 10.249 6.511 3.950 2.541 -2.594 H7 A1B4D 24 A1B4D H8 H4 H 0 1 N N N N N N 28.703 12.259 7.401 1.632 1.759 -2.324 H8 A1B4D 25 A1B4D H9 H5 H 0 1 N N N N N N 26.900 13.306 8.230 0.155 0.015 -1.625 H9 A1B4D 26 A1B4D H10 H6 H 0 1 N N N N N N 25.388 12.396 8.568 0.719 -1.292 -0.557 H10 A1B4D 27 A1B4D H H7 H 0 1 N N N N N N 23.038 15.480 9.659 -3.644 1.936 2.345 H A1B4D 28 A1B4D H1 H8 H 0 1 N N N N N N 23.932 13.122 12.561 -3.059 0.710 -1.109 H1 A1B4D 29 A1B4D H20 H9 H 0 1 N N N N N N 26.139 15.229 12.285 -2.194 -1.632 0.649 H20 A1B4D 30 A1B4D H21 H10 H 0 1 N N N N N N 26.348 13.502 12.733 -1.409 -1.082 -0.852 H21 A1B4D 31 A1B4D H16 H11 H 0 1 N N N N N N 23.684 16.097 11.886 -4.198 -0.346 1.520 H16 A1B4D 32 A1B4D H17 H12 H 0 1 N N N N N N 22.351 14.902 12.027 -4.943 0.914 0.507 H17 A1B4D 33 A1B4D H15 H13 H 0 1 N N N N N N 21.872 13.364 10.173 -3.747 3.095 0.154 H15 A1B4D 34 A1B4D H14 H14 H 0 1 N N N N N N 23.023 13.190 8.805 -2.188 3.390 0.961 H14 A1B4D 35 A1B4D H13 H15 H 0 1 N N N N N N 23.458 12.562 10.431 -2.290 2.220 -0.376 H13 A1B4D 36 A1B4D H11 H16 H 0 1 N N N N N N 25.400 15.748 9.932 -1.141 1.640 2.333 H11 A1B4D 37 A1B4D H12 H17 H 0 1 N N N N N N 25.124 14.368 8.815 -2.020 0.141 2.726 H12 A1B4D 38 A1B4D H3 H18 H 0 1 N N N N N N 24.020 7.939 10.599 4.332 -2.874 2.358 H3 A1B4D 39 A1B4D H4 H19 H 0 1 N N N N N N 24.735 7.627 8.981 5.099 -2.368 0.833 H4 A1B4D 40 A1B4D H2 H20 H 0 1 N N N N N N 25.782 7.626 10.441 4.852 -1.185 2.140 H2 A1B4D 41 A1B4D H6 H21 H 0 1 N N N N N N 28.907 8.031 7.063 5.768 1.485 -1.316 H6 A1B4D 42 A1B4D H5 H22 H 0 1 N N N N N N 26.900 7.803 8.481 5.271 -0.351 0.247 H5 A1B4D 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B4D C S SING N N 1 A1B4D S C1 SING N N 2 A1B4D C1 C2 DOUB Y N 3 A1B4D C2 C3 SING Y N 4 A1B4D C3 C4 DOUB Y N 5 A1B4D C4 C5 SING Y N 6 A1B4D C5 C6 DOUB Y N 7 A1B4D C1 C6 SING Y N 8 A1B4D C6 C7 SING N N 9 A1B4D C7 C8 SING N N 10 A1B4D O C8 DOUB N N 11 A1B4D C8 N SING N N 12 A1B4D N C9 SING N N 13 A1B4D C9 C10 SING N N 14 A1B4D C11 C10 SING N N 15 A1B4D C10 C12 SING N N 16 A1B4D C12 C13 SING N N 17 A1B4D C13 C14 SING N N 18 A1B4D N1 C14 SING N N 19 A1B4D C14 O1 DOUB N N 20 A1B4D C15 C13 SING N N 21 A1B4D N C15 SING N N 22 A1B4D N1 H18 SING N N 23 A1B4D N1 H19 SING N N 24 A1B4D C4 H7 SING N N 25 A1B4D C5 H8 SING N N 26 A1B4D C7 H9 SING N N 27 A1B4D C7 H10 SING N N 28 A1B4D C10 H SING N N 29 A1B4D C13 H1 SING N N 30 A1B4D C15 H20 SING N N 31 A1B4D C15 H21 SING N N 32 A1B4D C12 H16 SING N N 33 A1B4D C12 H17 SING N N 34 A1B4D C11 H15 SING N N 35 A1B4D C11 H14 SING N N 36 A1B4D C11 H13 SING N N 37 A1B4D C9 H11 SING N N 38 A1B4D C9 H12 SING N N 39 A1B4D C H3 SING N N 40 A1B4D C H4 SING N N 41 A1B4D C H2 SING N N 42 A1B4D C3 H6 SING N N 43 A1B4D C2 H5 SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B4D SMILES ACDLabs 14.52 "CC1CC(CN(C1)C(=O)Cc1ccccc1SC)C(N)=O" A1B4D InChI InChI 1.06 "InChI=1S/C16H22N2O2S/c1-11-7-13(16(17)20)10-18(9-11)15(19)8-12-5-3-4-6-14(12)21-2/h3-6,11,13H,7-10H2,1-2H3,(H2,17,20)/t11-,13-/m0/s1" A1B4D InChIKey InChI 1.06 KCUWPJSIVYQWJM-AAEUAGOBSA-N A1B4D SMILES_CANONICAL CACTVS 3.385 "CSc1ccccc1CC(=O)N2C[C@@H](C)C[C@@H](C2)C(N)=O" A1B4D SMILES CACTVS 3.385 "CSc1ccccc1CC(=O)N2C[CH](C)C[CH](C2)C(N)=O" A1B4D SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "C[C@H]1C[C@@H](CN(C1)C(=O)Cc2ccccc2SC)C(=O)N" A1B4D SMILES "OpenEye OEToolkits" 3.1.0.0 "CC1CC(CN(C1)C(=O)Cc2ccccc2SC)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B4D "SYSTEMATIC NAME" ACDLabs 14.52 "(3S,5S)-5-methyl-1-{[2-(methylsulfanyl)phenyl]acetyl}piperidine-3-carboxamide" A1B4D "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S},5~{S})-5-methyl-1-[2-(2-methylsulfanylphenyl)ethanoyl]piperidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B4D "Create component" 2025-03-21 RCSB A1B4D "Initial release" 2025-04-02 RCSB #