data_A1B4R # _chem_comp.id A1B4R _chem_comp.name "(3S)-1-[(4S)-3,4-dihydro-2H-1-benzothiopyran-4-carbonyl]piperidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H20 N2 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-24 _chem_comp.pdbx_modified_date 2025-03-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 304.407 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B4R _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I6B _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B4R N1 N1 N 0 1 N N N N N N 25.685 13.927 10.726 1.302 0.717 -0.267 N1 A1B4R 1 A1B4R C4 C1 C 0 1 N N N N N N 24.751 14.617 9.817 1.396 1.766 0.757 C4 A1B4R 2 A1B4R C5 C2 C 0 1 N N N N N N 26.548 12.911 10.429 0.103 0.240 -0.654 C5 A1B4R 3 A1B4R C6 C3 C 0 1 N N S N N N 26.618 12.382 8.998 -1.151 0.690 0.051 C6 A1B4R 4 A1B4R C7 C4 C 0 1 N N N N N N 28.051 12.600 8.449 -1.751 1.854 -0.719 C7 A1B4R 5 A1B4R C8 C5 C 0 1 N N N N N N 28.235 12.066 7.033 -3.006 2.345 0.017 C8 A1B4R 6 A1B4R C10 C6 C 0 1 Y N N N N N 26.601 8.587 8.437 -4.222 -1.566 0.268 C10 A1B4R 7 A1B4R C13 C7 C 0 1 Y N N N N N 25.239 10.485 9.899 -1.479 -1.721 0.414 C13 A1B4R 8 A1B4R C15 C8 C 0 1 N N N N N N 25.617 14.417 12.109 2.541 0.202 -0.867 C15 A1B4R 9 A1B4R O1 O1 O 0 1 N N N N N N 27.309 12.451 11.260 0.032 -0.551 -1.571 O1 A1B4R 10 A1B4R C3 C9 C 0 1 N N N N N N 23.312 14.500 10.310 2.342 1.290 1.865 C3 A1B4R 11 A1B4R C2 C10 C 0 1 N N N N N N 23.205 14.993 11.770 3.684 0.893 1.247 C2 A1B4R 12 A1B4R C1 C11 C 0 1 N N S N N N 24.200 14.213 12.656 3.477 -0.259 0.255 C1 A1B4R 13 A1B4R C C12 C 0 1 N N N N N N 24.148 14.654 14.110 4.806 -0.669 -0.326 C A1B4R 14 A1B4R O O2 O 0 1 N N N N N N 24.531 15.783 14.453 4.991 -0.600 -1.523 O A1B4R 15 A1B4R N N2 N 0 1 N N N N N N 23.767 13.717 14.984 5.788 -1.110 0.484 N A1B4R 16 A1B4R C14 C13 C 0 1 Y N N N N N 26.251 10.908 9.037 -2.076 -0.483 0.183 C14 A1B4R 17 A1B4R C12 C14 C 0 1 Y N N N N N 24.932 9.139 10.056 -2.240 -2.859 0.569 C12 A1B4R 18 A1B4R C11 C15 C 0 1 Y N N N N N 25.634 8.194 9.343 -3.620 -2.783 0.500 C11 A1B4R 19 A1B4R C9 C16 C 0 1 Y N N N N N 26.916 9.937 8.276 -3.454 -0.413 0.100 C9 A1B4R 20 A1B4R S S1 S 0 1 N N N N N N 28.155 10.269 7.044 -4.302 1.098 -0.232 S A1B4R 21 A1B4R H9 H1 H 0 1 N N N N N N 24.825 14.166 8.817 1.787 2.680 0.310 H9 A1B4R 22 A1B4R H8 H2 H 0 1 N N N N N N 25.025 15.681 9.761 0.408 1.957 1.176 H8 A1B4R 23 A1B4R H1 H3 H 0 1 N N N N N N 25.900 12.927 8.367 -0.883 1.035 1.050 H1 A1B4R 24 A1B4R H11 H4 H 0 1 N N N N N N 28.265 13.679 8.447 -1.024 2.663 -0.782 H11 A1B4R 25 A1B4R H10 H5 H 0 1 N N N N N N 28.762 12.086 9.112 -2.022 1.526 -1.722 H10 A1B4R 26 A1B4R H13 H6 H 0 1 N N N N N N 27.438 12.463 6.387 -2.794 2.452 1.081 H13 A1B4R 27 A1B4R H12 H7 H 0 1 N N N N N N 29.214 12.386 6.647 -3.327 3.301 -0.396 H12 A1B4R 28 A1B4R H14 H8 H 0 1 N N N N N N 27.117 7.843 7.849 -5.299 -1.504 0.215 H14 A1B4R 29 A1B4R H17 H9 H 0 1 N N N N N N 24.681 11.222 10.458 -0.403 -1.789 0.474 H17 A1B4R 30 A1B4R H19 H10 H 0 1 N N N N N N 26.333 13.860 12.731 2.309 -0.640 -1.519 H19 A1B4R 31 A1B4R H18 H11 H 0 1 N N N N N N 25.868 15.488 12.131 3.022 0.991 -1.445 H18 A1B4R 32 A1B4R H7 H12 H 0 1 N N N N N N 22.995 13.448 10.258 2.495 2.095 2.583 H7 A1B4R 33 A1B4R H6 H13 H 0 1 N N N N N N 22.658 15.112 9.671 1.905 0.429 2.371 H6 A1B4R 34 A1B4R H5 H14 H 0 1 N N N N N N 22.181 14.829 12.138 4.109 1.747 0.720 H5 A1B4R 35 A1B4R H4 H15 H 0 1 N N N N N N 23.442 16.066 11.812 4.367 0.577 2.036 H4 A1B4R 36 A1B4R H H16 H 0 1 N N N N N N 23.952 13.143 12.601 3.028 -1.108 0.772 H A1B4R 37 A1B4R H3 H17 H 0 1 N N N N N N 23.783 13.912 15.965 5.640 -1.164 1.441 H3 A1B4R 38 A1B4R H2 H18 H 0 1 N N N N N N 23.466 12.821 14.657 6.643 -1.373 0.110 H2 A1B4R 39 A1B4R H16 H19 H 0 1 N N N N N N 24.147 8.836 10.733 -1.760 -3.810 0.743 H16 A1B4R 40 A1B4R H15 H20 H 0 1 N N N N N N 25.429 7.144 9.492 -4.220 -3.672 0.628 H15 A1B4R 41 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B4R N C SING N N 1 A1B4R O C DOUB N N 2 A1B4R C C1 SING N N 3 A1B4R C1 C2 SING N N 4 A1B4R C2 C3 SING N N 5 A1B4R C3 C4 SING N N 6 A1B4R C4 N1 SING N N 7 A1B4R N1 C5 SING N N 8 A1B4R C5 O1 DOUB N N 9 A1B4R C6 C5 SING N N 10 A1B4R C6 C7 SING N N 11 A1B4R C7 C8 SING N N 12 A1B4R C8 S SING N N 13 A1B4R S C9 SING N N 14 A1B4R C9 C10 SING Y N 15 A1B4R C10 C11 DOUB Y N 16 A1B4R C11 C12 SING Y N 17 A1B4R C12 C13 DOUB Y N 18 A1B4R C13 C14 SING Y N 19 A1B4R C9 C14 DOUB Y N 20 A1B4R C14 C6 SING N N 21 A1B4R C15 N1 SING N N 22 A1B4R C1 C15 SING N N 23 A1B4R C4 H9 SING N N 24 A1B4R C4 H8 SING N N 25 A1B4R C6 H1 SING N N 26 A1B4R C7 H11 SING N N 27 A1B4R C7 H10 SING N N 28 A1B4R C8 H13 SING N N 29 A1B4R C8 H12 SING N N 30 A1B4R C10 H14 SING N N 31 A1B4R C13 H17 SING N N 32 A1B4R C15 H19 SING N N 33 A1B4R C15 H18 SING N N 34 A1B4R C3 H7 SING N N 35 A1B4R C3 H6 SING N N 36 A1B4R C2 H5 SING N N 37 A1B4R C2 H4 SING N N 38 A1B4R C1 H SING N N 39 A1B4R N H3 SING N N 40 A1B4R N H2 SING N N 41 A1B4R C12 H16 SING N N 42 A1B4R C11 H15 SING N N 43 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B4R SMILES ACDLabs 14.52 "NC(=O)C1CCCN(C1)C(=O)C1CCSc2ccccc21" A1B4R InChI InChI 1.06 "InChI=1S/C16H20N2O2S/c17-15(19)11-4-3-8-18(10-11)16(20)13-7-9-21-14-6-2-1-5-12(13)14/h1-2,5-6,11,13H,3-4,7-10H2,(H2,17,19)/t11-,13-/m0/s1" A1B4R InChIKey InChI 1.06 CIPSLIIOJPGGQL-AAEUAGOBSA-N A1B4R SMILES_CANONICAL CACTVS 3.385 "NC(=O)[C@H]1CCCN(C1)C(=O)[C@H]2CCSc3ccccc23" A1B4R SMILES CACTVS 3.385 "NC(=O)[CH]1CCCN(C1)C(=O)[CH]2CCSc3ccccc23" A1B4R SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1ccc2c(c1)[C@H](CCS2)C(=O)N3CCC[C@@H](C3)C(=O)N" A1B4R SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccc2c(c1)C(CCS2)C(=O)N3CCCC(C3)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B4R "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-1-[(4S)-3,4-dihydro-2H-1-benzothiopyran-4-carbonyl]piperidine-3-carboxamide" A1B4R "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-1-[[(4~{S})-3,4-dihydro-2~{H}-thiochromen-4-yl]carbonyl]piperidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B4R "Create component" 2025-03-24 RCSB A1B4R "Initial release" 2025-04-02 RCSB #