data_A1B4T # _chem_comp.id A1B4T _chem_comp.name "(3S)-1-[(3-ethylthiophen-2-yl)methyl]-6-oxopiperidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H18 N2 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-24 _chem_comp.pdbx_modified_date 2025-03-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 266.359 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B4T _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I6E _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B4T N1 N1 N 0 1 N N N N N N 12.099 14.510 17.498 4.774 -0.808 0.881 N1 A1B4T 1 A1B4T C4 C1 C 0 1 Y N N N N N 10.404 10.461 23.483 -2.796 -2.347 0.924 C4 A1B4T 2 A1B4T C5 C2 C 0 1 Y N N N N N 10.186 12.920 23.401 -1.719 -0.505 -0.394 C5 A1B4T 3 A1B4T C6 C3 C 0 1 N N N N N N 10.375 14.387 23.137 -0.912 0.406 -1.284 C6 A1B4T 4 A1B4T C7 C4 C 0 1 N N N N N N 11.060 14.960 20.868 1.448 -0.245 -0.756 C7 A1B4T 5 A1B4T C8 C5 C 0 1 N N S N N N 12.230 14.817 19.886 2.499 -0.009 0.330 C8 A1B4T 6 A1B4T C10 C6 C 0 1 N N N N N N 13.422 15.617 20.416 2.891 1.474 0.320 C10 A1B4T 7 A1B4T O1 O1 O 0 1 N N N N N N 12.937 14.776 23.967 -0.501 2.615 0.032 O1 A1B4T 8 A1B4T C12 C7 C 0 1 N N N N N N 12.723 14.827 22.763 0.457 1.871 0.033 C12 A1B4T 9 A1B4T C11 C8 C 0 1 N N N N N N 13.846 15.105 21.799 1.686 2.296 0.785 C11 A1B4T 10 A1B4T C9 C9 C 0 1 N N N N N N 11.793 15.301 18.513 3.714 -0.855 0.050 C9 A1B4T 11 A1B4T O O2 O 0 1 N N N N N N 11.230 16.394 18.369 3.738 -1.577 -0.924 O A1B4T 12 A1B4T N N2 N 0 1 N N N N N N 11.482 14.662 22.243 0.363 0.720 -0.633 N A1B4T 13 A1B4T S S1 S 0 1 Y N N N N N 11.174 11.736 22.633 -1.483 -2.241 -0.241 S A1B4T 14 A1B4T C3 C10 C 0 1 Y N N N N N 9.434 10.922 24.310 -3.318 -1.135 1.121 C3 A1B4T 15 A1B4T C2 C11 C 0 1 Y N N N N N 9.304 12.341 24.257 -2.727 -0.119 0.390 C2 A1B4T 16 A1B4T C1 C12 C 0 1 N N N N N N 8.294 13.148 25.028 -3.181 1.315 0.479 C1 A1B4T 17 A1B4T C C13 C 0 1 N N N N N N 7.986 12.622 26.405 -4.143 1.618 -0.671 C A1B4T 18 A1B4T H13 H1 H 0 1 N N N N N N 11.875 14.787 16.563 4.754 -0.231 1.660 H13 A1B4T 19 A1B4T H12 H2 H 0 1 N N N N N N 12.554 13.635 17.665 5.554 -1.356 0.703 H12 A1B4T 20 A1B4T H7 H3 H 0 1 N N N N N N 10.661 9.418 23.373 -3.131 -3.254 1.404 H7 A1B4T 21 A1B4T H9 H4 H 0 1 N N N N N N 9.453 14.784 22.687 -0.722 -0.090 -2.235 H9 A1B4T 22 A1B4T H8 H5 H 0 1 N N N N N N 10.563 14.894 24.095 -1.467 1.327 -1.459 H8 A1B4T 23 A1B4T H11 H6 H 0 1 N N N N N N 10.261 14.262 20.578 1.913 -0.142 -1.736 H11 A1B4T 24 A1B4T H10 H7 H 0 1 N N N N N N 10.679 15.991 20.825 1.044 -1.252 -0.653 H10 A1B4T 25 A1B4T H H8 H 0 1 N N N N N N 12.513 13.756 19.820 2.084 -0.271 1.303 H A1B4T 26 A1B4T H15 H9 H 0 1 N N N N N N 14.266 15.513 19.718 3.729 1.636 0.997 H15 A1B4T 27 A1B4T H14 H10 H 0 1 N N N N N N 13.139 16.677 20.494 3.171 1.772 -0.690 H14 A1B4T 28 A1B4T H17 H11 H 0 1 N N N N N N 14.408 14.170 21.656 1.530 2.138 1.852 H17 A1B4T 29 A1B4T H16 H12 H 0 1 N N N N N N 14.502 15.862 22.253 1.876 3.353 0.600 H16 A1B4T 30 A1B4T H6 H13 H 0 1 N N N N N N 8.828 10.286 24.938 -4.141 -0.960 1.798 H6 A1B4T 31 A1B4T H5 H14 H 0 1 N N N N N N 7.358 13.166 24.451 -3.689 1.476 1.430 H5 A1B4T 32 A1B4T H4 H15 H 0 1 N N N N N N 8.681 14.172 25.131 -2.316 1.975 0.413 H4 A1B4T 33 A1B4T H3 H16 H 0 1 N N N N N N 7.243 13.273 26.889 -3.635 1.457 -1.622 H3 A1B4T 34 A1B4T H1 H17 H 0 1 N N N N N N 7.584 11.601 26.326 -5.008 0.958 -0.604 H1 A1B4T 35 A1B4T H2 H18 H 0 1 N N N N N N 8.907 12.608 27.006 -4.472 2.655 -0.606 H2 A1B4T 36 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B4T C C1 SING N N 1 A1B4T C1 C2 SING N N 2 A1B4T C2 C3 SING Y N 3 A1B4T C3 C4 DOUB Y N 4 A1B4T C4 S SING Y N 5 A1B4T S C5 SING Y N 6 A1B4T C2 C5 DOUB Y N 7 A1B4T C5 C6 SING N N 8 A1B4T C6 N SING N N 9 A1B4T N C7 SING N N 10 A1B4T C7 C8 SING N N 11 A1B4T C9 C8 SING N N 12 A1B4T N1 C9 SING N N 13 A1B4T O C9 DOUB N N 14 A1B4T C8 C10 SING N N 15 A1B4T C10 C11 SING N N 16 A1B4T C11 C12 SING N N 17 A1B4T N C12 SING N N 18 A1B4T C12 O1 DOUB N N 19 A1B4T N1 H13 SING N N 20 A1B4T N1 H12 SING N N 21 A1B4T C4 H7 SING N N 22 A1B4T C6 H9 SING N N 23 A1B4T C6 H8 SING N N 24 A1B4T C7 H11 SING N N 25 A1B4T C7 H10 SING N N 26 A1B4T C8 H SING N N 27 A1B4T C10 H15 SING N N 28 A1B4T C10 H14 SING N N 29 A1B4T C11 H17 SING N N 30 A1B4T C11 H16 SING N N 31 A1B4T C3 H6 SING N N 32 A1B4T C1 H5 SING N N 33 A1B4T C1 H4 SING N N 34 A1B4T C H3 SING N N 35 A1B4T C H1 SING N N 36 A1B4T C H2 SING N N 37 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B4T SMILES ACDLabs 14.52 "CCc1ccsc1CN1CC(CCC1=O)C(N)=O" A1B4T InChI InChI 1.06 "InChI=1S/C13H18N2O2S/c1-2-9-5-6-18-11(9)8-15-7-10(13(14)17)3-4-12(15)16/h5-6,10H,2-4,7-8H2,1H3,(H2,14,17)/t10-/m0/s1" A1B4T InChIKey InChI 1.06 HYQKQMFDHNHXPW-JTQLQIEISA-N A1B4T SMILES_CANONICAL CACTVS 3.385 "CCc1ccsc1CN2C[C@H](CCC2=O)C(N)=O" A1B4T SMILES CACTVS 3.385 "CCc1ccsc1CN2C[CH](CCC2=O)C(N)=O" A1B4T SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CCc1ccsc1CN2C[C@H](CCC2=O)C(=O)N" A1B4T SMILES "OpenEye OEToolkits" 3.1.0.0 "CCc1ccsc1CN2CC(CCC2=O)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B4T "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-1-[(3-ethylthiophen-2-yl)methyl]-6-oxopiperidine-3-carboxamide" A1B4T "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-1-[(3-ethylthiophen-2-yl)methyl]-6-oxidanylidene-piperidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B4T "Create component" 2025-03-24 RCSB A1B4T "Initial release" 2025-04-02 RCSB #