data_A1B4U # _chem_comp.id A1B4U _chem_comp.name "(3S)-N~1~-[2-(cyclopropylsulfanyl)phenyl]piperidine-1,3-dicarboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H21 N3 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-24 _chem_comp.pdbx_modified_date 2025-03-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 319.422 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B4U _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I6F _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B4U N1 N1 N 0 1 N N N N N N 25.440 14.147 10.579 1.832 0.278 -0.447 N1 A1B4U 1 A1B4U C4 C1 C 0 1 N N N N N N 24.323 14.705 9.806 1.614 1.719 -0.261 C4 A1B4U 2 A1B4U C5 C2 C 0 1 N N N N N N 26.008 12.958 10.258 0.797 -0.585 -0.398 C5 A1B4U 3 A1B4U C6 C3 C 0 1 Y N N N N N 25.845 11.025 8.770 -1.489 -1.053 0.075 C6 A1B4U 4 A1B4U C7 C4 C 0 1 Y N N N N N 25.229 9.858 9.213 -1.222 -2.396 0.282 C7 A1B4U 5 A1B4U C8 C5 C 0 1 Y N N N N N 25.736 8.627 8.842 -2.264 -3.293 0.434 C8 A1B4U 6 A1B4U C10 C6 C 0 1 Y N N N N N 27.458 9.697 7.564 -3.850 -1.517 0.166 C10 A1B4U 7 A1B4U C13 C7 C 0 1 N N N N N N 28.788 10.961 5.107 -5.643 2.483 -0.581 C13 A1B4U 8 A1B4U C15 C8 C 0 1 N N N N N N 25.525 14.626 11.957 3.197 -0.204 -0.696 C15 A1B4U 9 A1B4U O1 O1 O 0 1 N N N N N N 26.990 12.546 10.852 0.976 -1.763 -0.641 O1 A1B4U 10 A1B4U C3 C9 C 0 1 N N N N N N 23.002 14.538 10.530 2.544 2.218 0.850 C3 A1B4U 11 A1B4U C2 C10 C 0 1 N N N N N N 23.109 15.023 11.969 3.987 1.839 0.511 C2 A1B4U 12 A1B4U C1 C11 C 0 1 N N S N N N 24.233 14.290 12.699 4.113 0.312 0.419 C1 A1B4U 13 A1B4U C C12 C 0 1 N N N N N N 24.322 14.716 14.155 5.542 -0.058 0.117 C A1B4U 14 A1B4U O O2 O 0 1 N N N N N N 24.702 15.840 14.468 6.379 0.810 -0.013 O A1B4U 15 A1B4U N N2 N 0 1 N N N N N N 23.983 13.793 15.033 5.890 -1.354 -0.009 N A1B4U 16 A1B4U N2 N3 N 0 1 N N N N N N 25.425 12.285 9.233 -0.435 -0.141 -0.079 N2 A1B4U 17 A1B4U C11 C13 C 0 1 Y N N N N N 26.956 10.945 7.921 -2.811 -0.610 0.013 C11 A1B4U 18 A1B4U S S1 S 0 1 N N N N N N 27.643 12.479 7.357 -3.160 1.096 -0.257 S A1B4U 19 A1B4U C12 C14 C 0 1 N N N N N N 28.845 12.150 6.014 -4.973 1.148 -0.252 C12 A1B4U 20 A1B4U C14 C15 C 0 1 N N N N N N 29.840 11.042 6.161 -5.654 1.955 0.855 C14 A1B4U 21 A1B4U C9 C16 C 0 1 Y N N N N N 26.847 8.548 8.033 -3.573 -2.854 0.379 C9 A1B4U 22 A1B4U H8 H1 H 0 1 N N N N N N 24.266 14.188 8.837 1.838 2.246 -1.188 H8 A1B4U 23 A1B4U H7 H2 H 0 1 N N N N N N 24.505 15.777 9.639 0.576 1.899 0.020 H7 A1B4U 24 A1B4U H10 H3 H 0 1 N N N N N N 24.356 9.914 9.846 -0.200 -2.743 0.326 H10 A1B4U 25 A1B4U H11 H4 H 0 1 N N N N N N 25.258 7.723 9.188 -2.053 -4.340 0.595 H11 A1B4U 26 A1B4U H13 H5 H 0 1 N N N N N N 28.323 9.626 6.922 -4.874 -1.178 0.119 H13 A1B4U 27 A1B4U H16 H6 H 0 1 N N N N N N 27.968 10.235 5.204 -4.994 3.331 -0.800 H16 A1B4U 28 A1B4U H15 H7 H 0 1 N N N N N N 29.063 11.065 4.047 -6.581 2.453 -1.135 H15 A1B4U 29 A1B4U H20 H8 H 0 1 N N N N N N 26.373 14.140 12.461 3.205 -1.294 -0.699 H20 A1B4U 30 A1B4U H19 H9 H 0 1 N N N N N N 25.674 15.716 11.957 3.546 0.167 -1.659 H19 A1B4U 31 A1B4U H6 H10 H 0 1 N N N N N N 22.722 13.474 10.528 2.462 3.302 0.933 H6 A1B4U 32 A1B4U H5 H11 H 0 1 N N N N N N 22.229 15.122 10.009 2.259 1.758 1.797 H5 A1B4U 33 A1B4U H4 H12 H 0 1 N N N N N N 22.157 14.833 12.487 4.262 2.279 -0.447 H4 A1B4U 34 A1B4U H3 H13 H 0 1 N N N N N N 23.319 16.103 11.972 4.653 2.214 1.288 H3 A1B4U 35 A1B4U H H14 H 0 1 N N N N N N 24.055 13.206 12.646 3.813 -0.135 1.367 H A1B4U 36 A1B4U H2 H15 H 0 1 N N N N N N 24.029 13.993 16.012 5.221 -2.048 0.094 H2 A1B4U 37 A1B4U H1 H16 H 0 1 N N N N N N 23.680 12.893 14.720 6.810 -1.592 -0.204 H1 A1B4U 38 A1B4U H9 H17 H 0 1 N N N N N N 24.645 12.714 8.777 -0.592 0.808 0.044 H9 A1B4U 39 A1B4U H14 H18 H 0 1 N N N N N N 29.216 13.086 5.571 -5.470 0.238 -0.591 H14 A1B4U 40 A1B4U H18 H19 H 0 1 N N N N N N 29.795 10.375 7.035 -5.012 2.455 1.580 H18 A1B4U 41 A1B4U H17 H20 H 0 1 N N N N N N 30.890 11.205 5.878 -6.599 1.577 1.245 H17 A1B4U 42 A1B4U H12 H21 H 0 1 N N N N N N 27.245 7.581 7.762 -4.383 -3.559 0.498 H12 A1B4U 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B4U N C SING N N 1 A1B4U O C DOUB N N 2 A1B4U C C1 SING N N 3 A1B4U C1 C2 SING N N 4 A1B4U C2 C3 SING N N 5 A1B4U C3 C4 SING N N 6 A1B4U C4 N1 SING N N 7 A1B4U N1 C5 SING N N 8 A1B4U C5 O1 DOUB N N 9 A1B4U N2 C5 SING N N 10 A1B4U C6 N2 SING N N 11 A1B4U C6 C7 DOUB Y N 12 A1B4U C7 C8 SING Y N 13 A1B4U C8 C9 DOUB Y N 14 A1B4U C9 C10 SING Y N 15 A1B4U C10 C11 DOUB Y N 16 A1B4U C11 C6 SING Y N 17 A1B4U S C11 SING N N 18 A1B4U C12 S SING N N 19 A1B4U C12 C13 SING N N 20 A1B4U C13 C14 SING N N 21 A1B4U C14 C12 SING N N 22 A1B4U C15 N1 SING N N 23 A1B4U C1 C15 SING N N 24 A1B4U C4 H8 SING N N 25 A1B4U C4 H7 SING N N 26 A1B4U C7 H10 SING N N 27 A1B4U C8 H11 SING N N 28 A1B4U C10 H13 SING N N 29 A1B4U C13 H16 SING N N 30 A1B4U C13 H15 SING N N 31 A1B4U C15 H20 SING N N 32 A1B4U C15 H19 SING N N 33 A1B4U C3 H6 SING N N 34 A1B4U C3 H5 SING N N 35 A1B4U C2 H4 SING N N 36 A1B4U C2 H3 SING N N 37 A1B4U C1 H SING N N 38 A1B4U N H2 SING N N 39 A1B4U N H1 SING N N 40 A1B4U N2 H9 SING N N 41 A1B4U C12 H14 SING N N 42 A1B4U C14 H18 SING N N 43 A1B4U C14 H17 SING N N 44 A1B4U C9 H12 SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B4U SMILES ACDLabs 14.52 "O=C(Nc1ccccc1SC1CC1)N1CCCC(C1)C(N)=O" A1B4U InChI InChI 1.06 "InChI=1S/C16H21N3O2S/c17-15(20)11-4-3-9-19(10-11)16(21)18-13-5-1-2-6-14(13)22-12-7-8-12/h1-2,5-6,11-12H,3-4,7-10H2,(H2,17,20)(H,18,21)/t11-/m0/s1" A1B4U InChIKey InChI 1.06 NRHXRDKTQQQCFH-NSHDSACASA-N A1B4U SMILES_CANONICAL CACTVS 3.385 "NC(=O)[C@H]1CCCN(C1)C(=O)Nc2ccccc2SC3CC3" A1B4U SMILES CACTVS 3.385 "NC(=O)[CH]1CCCN(C1)C(=O)Nc2ccccc2SC3CC3" A1B4U SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1ccc(c(c1)NC(=O)N2CCC[C@@H](C2)C(=O)N)SC3CC3" A1B4U SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccc(c(c1)NC(=O)N2CCCC(C2)C(=O)N)SC3CC3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B4U "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-N~1~-[2-(cyclopropylsulfanyl)phenyl]piperidine-1,3-dicarboxamide" A1B4U "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-~{N}1-(2-cyclopropylsulfanylphenyl)piperidine-1,3-dicarboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B4U "Create component" 2025-03-24 RCSB A1B4U "Initial release" 2025-04-02 RCSB #