data_A1B4Z # _chem_comp.id A1B4Z _chem_comp.name "(3S)-1-[(5-chloropyrimidin-4-yl)acetyl]piperidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H15 Cl N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-24 _chem_comp.pdbx_modified_date 2025-03-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 282.726 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B4Z _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I6K _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B4Z N1 N1 N 0 1 N N N N N N 25.185 13.755 10.449 1.134 0.552 0.078 N1 A1B4Z 1 A1B4Z N3 N2 N 0 1 Y N N N N N 28.056 9.038 7.216 -4.773 -1.478 0.313 N3 A1B4Z 2 A1B4Z C4 C1 C 0 1 N N N N N N 24.139 14.454 9.686 1.424 1.760 0.863 C4 A1B4Z 3 A1B4Z C5 C2 C 0 1 N N N N N N 25.899 12.698 10.008 -0.109 0.033 0.052 C5 A1B4Z 4 A1B4Z C6 C3 C 0 1 N N N N N N 25.559 12.182 8.619 -1.217 0.691 0.834 C6 A1B4Z 5 A1B4Z C7 C4 C 0 1 Y N N N N N 26.437 11.041 8.187 -2.497 -0.081 0.637 C7 A1B4Z 6 A1B4Z C8 C5 C 0 1 Y N N N N N 28.181 10.324 6.899 -3.931 -1.752 1.289 C8 A1B4Z 7 A1B4Z C10 C6 C 0 1 Y N N N N N 26.207 9.731 8.548 -3.358 0.238 -0.402 C10 A1B4Z 8 A1B4Z CL CL1 CL 0 0 N N N N N N 24.917 9.280 9.613 -2.986 1.531 -1.500 CL A1B4Z 9 A1B4Z C9 C7 C 0 1 Y N N N N N 27.039 8.757 8.034 -4.524 -0.500 -0.543 C9 A1B4Z 10 A1B4Z N2 N3 N 0 1 Y N N N N N 27.434 11.339 7.333 -2.814 -1.072 1.454 N2 A1B4Z 11 A1B4Z O1 O1 O 0 1 N N N N N N 26.794 12.207 10.674 -0.336 -0.965 -0.599 O1 A1B4Z 12 A1B4Z C3 C8 C 0 1 N N N N N N 22.794 14.400 10.410 2.602 1.469 1.798 C3 A1B4Z 13 A1B4Z C2 C9 C 0 1 N N N N N N 22.930 14.892 11.861 3.786 0.953 0.976 C2 A1B4Z 14 A1B4Z C11 C10 C 0 1 N N N N N N 25.375 14.262 11.812 2.223 -0.075 -0.683 C11 A1B4Z 15 A1B4Z C1 C11 C 0 1 N N S N N N 24.057 14.131 12.582 3.394 -0.348 0.274 C1 A1B4Z 16 A1B4Z C C12 C 0 1 N N N N N N 24.211 14.589 14.022 4.570 -0.872 -0.509 C A1B4Z 17 A1B4Z O O2 O 0 1 N N N N N N 24.658 15.707 14.292 5.619 -0.264 -0.507 O A1B4Z 18 A1B4Z N N4 N 0 1 N N N N N N 23.860 13.709 14.951 4.456 -2.016 -1.213 N A1B4Z 19 A1B4Z H8 H1 H 0 1 N N N N N N 24.035 13.977 8.700 1.685 2.578 0.192 H8 A1B4Z 20 A1B4Z H7 H2 H 0 1 N N N N N N 24.433 15.506 9.555 0.548 2.034 1.450 H7 A1B4Z 21 A1B4Z H10 H3 H 0 1 N N N N N N 24.513 11.840 8.618 -0.958 0.702 1.892 H10 A1B4Z 22 A1B4Z H9 H4 H 0 1 N N N N N N 25.676 13.006 7.900 -1.352 1.713 0.482 H9 A1B4Z 23 A1B4Z H11 H5 H 0 1 N N N N N N 28.977 10.574 6.213 -4.163 -2.556 1.972 H11 A1B4Z 24 A1B4Z H12 H6 H 0 1 N N N N N N 26.860 7.727 8.304 -5.218 -0.280 -1.340 H12 A1B4Z 25 A1B4Z H6 H7 H 0 1 N N N N N N 22.429 13.362 10.415 2.890 2.383 2.317 H6 A1B4Z 26 A1B4Z H5 H8 H 0 1 N N N N N N 22.074 15.040 9.879 2.310 0.714 2.528 H5 A1B4Z 27 A1B4Z H4 H9 H 0 1 N N N N N N 21.981 14.723 12.392 4.062 1.699 0.231 H4 A1B4Z 28 A1B4Z H3 H10 H 0 1 N N N N N N 23.162 15.967 11.859 4.634 0.768 1.636 H3 A1B4Z 29 A1B4Z H14 H11 H 0 1 N N N N N N 26.157 13.676 12.317 1.875 -1.013 -1.114 H14 A1B4Z 30 A1B4Z H13 H12 H 0 1 N N N N N N 25.676 15.319 11.773 2.546 0.596 -1.479 H13 A1B4Z 31 A1B4Z H H13 H 0 1 N N N N N N 23.783 13.066 12.595 3.093 -1.087 1.018 H A1B4Z 32 A1B4Z H2 H14 H 0 1 N N N N N N 23.953 13.940 15.919 3.616 -2.502 -1.215 H2 A1B4Z 33 A1B4Z H1 H15 H 0 1 N N N N N N 23.502 12.815 14.683 5.213 -2.352 -1.717 H1 A1B4Z 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B4Z N C SING N N 1 A1B4Z O C DOUB N N 2 A1B4Z C C1 SING N N 3 A1B4Z C1 C2 SING N N 4 A1B4Z C2 C3 SING N N 5 A1B4Z C3 C4 SING N N 6 A1B4Z C4 N1 SING N N 7 A1B4Z N1 C5 SING N N 8 A1B4Z O1 C5 DOUB N N 9 A1B4Z C5 C6 SING N N 10 A1B4Z C6 C7 SING N N 11 A1B4Z C7 N2 DOUB Y N 12 A1B4Z N2 C8 SING Y N 13 A1B4Z C8 N3 DOUB Y N 14 A1B4Z N3 C9 SING Y N 15 A1B4Z C9 C10 DOUB Y N 16 A1B4Z C7 C10 SING Y N 17 A1B4Z C10 CL SING N N 18 A1B4Z C11 N1 SING N N 19 A1B4Z C1 C11 SING N N 20 A1B4Z C4 H8 SING N N 21 A1B4Z C4 H7 SING N N 22 A1B4Z C6 H10 SING N N 23 A1B4Z C6 H9 SING N N 24 A1B4Z C8 H11 SING N N 25 A1B4Z C9 H12 SING N N 26 A1B4Z C3 H6 SING N N 27 A1B4Z C3 H5 SING N N 28 A1B4Z C2 H4 SING N N 29 A1B4Z C2 H3 SING N N 30 A1B4Z C11 H14 SING N N 31 A1B4Z C11 H13 SING N N 32 A1B4Z C1 H SING N N 33 A1B4Z N H2 SING N N 34 A1B4Z N H1 SING N N 35 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B4Z SMILES ACDLabs 14.52 "O=C(Cc1ncncc1Cl)N1CCCC(C1)C(N)=O" A1B4Z InChI InChI 1.06 "InChI=1S/C12H15ClN4O2/c13-9-5-15-7-16-10(9)4-11(18)17-3-1-2-8(6-17)12(14)19/h5,7-8H,1-4,6H2,(H2,14,19)/t8-/m0/s1" A1B4Z InChIKey InChI 1.06 FLCFQJGWJJRWLD-QMMMGPOBSA-N A1B4Z SMILES_CANONICAL CACTVS 3.385 "NC(=O)[C@H]1CCCN(C1)C(=O)Cc2ncncc2Cl" A1B4Z SMILES CACTVS 3.385 "NC(=O)[CH]1CCCN(C1)C(=O)Cc2ncncc2Cl" A1B4Z SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1c(c(ncn1)CC(=O)N2CCC[C@@H](C2)C(=O)N)Cl" A1B4Z SMILES "OpenEye OEToolkits" 3.1.0.0 "c1c(c(ncn1)CC(=O)N2CCCC(C2)C(=O)N)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B4Z "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-1-[(5-chloropyrimidin-4-yl)acetyl]piperidine-3-carboxamide" A1B4Z "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-1-[2-(5-chloranylpyrimidin-4-yl)ethanoyl]piperidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B4Z "Create component" 2025-03-24 RCSB A1B4Z "Initial release" 2025-04-02 RCSB #