data_A1B54 # _chem_comp.id A1B54 _chem_comp.name "(3S)-N~1~-{2-methoxy-6-[(propan-2-yl)sulfanyl]phenyl}piperidine-1,3-dicarboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H25 N3 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-24 _chem_comp.pdbx_modified_date 2025-03-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 351.464 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B54 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I7T _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B54 N1 N1 N 0 1 N N N N N N 25.349 13.723 10.603 1.918 0.419 -0.943 N1 A1B54 1 A1B54 C4 C1 C 0 1 Y N N N N N 28.442 10.408 7.006 -3.810 0.292 0.455 C4 A1B54 2 A1B54 C5 C2 C 0 1 Y N N N N N 27.714 11.434 7.604 -2.510 -0.162 0.278 C5 A1B54 3 A1B54 C6 C3 C 0 1 N N N N N N 29.295 13.149 6.014 -3.876 -2.556 -0.209 C6 A1B54 4 A1B54 C7 C4 C 0 1 N N N N N N 29.270 14.550 5.436 -4.499 -2.058 -1.515 C7 A1B54 5 A1B54 C8 C5 C 0 1 N N N N N N 30.636 12.822 6.625 -3.799 -4.084 -0.231 C8 A1B54 6 A1B54 C10 C6 C 0 1 N N N N N N 26.124 12.676 10.185 0.692 0.919 -0.686 C10 A1B54 7 A1B54 C13 C7 C 0 1 N N N N N N 23.046 14.920 11.827 4.716 0.100 -0.687 C13 A1B54 8 A1B54 C15 C8 C 0 1 N N N N N N 24.170 14.563 14.070 4.363 -1.634 1.052 C15 A1B54 9 A1B54 O2 O1 O 0 1 N N N N N N 24.590 15.699 14.324 5.431 -2.064 0.672 O2 A1B54 10 A1B54 N2 N2 N 0 1 N N N N N N 23.806 13.688 15.005 3.703 -2.255 2.049 N2 A1B54 11 A1B54 C14 C9 C 0 1 N N S N N N 24.045 14.076 12.638 3.774 -0.405 0.409 C14 A1B54 12 A1B54 C12 C10 C 0 1 N N N N N N 22.994 14.431 10.369 4.135 1.367 -1.318 C12 A1B54 13 A1B54 C11 C11 C 0 1 N N N N N N 24.382 14.438 9.755 2.781 1.039 -1.957 C11 A1B54 14 A1B54 C16 C12 C 0 1 N N N N N N 25.431 14.177 11.991 2.417 -0.752 -0.210 C16 A1B54 15 A1B54 O1 O2 O 0 1 N N N N N N 26.987 12.196 10.903 0.329 1.945 -1.228 O1 A1B54 16 A1B54 N N3 N 0 1 N N N N N N 25.829 12.176 8.960 -0.129 0.281 0.171 N A1B54 17 A1B54 C9 C13 C 0 1 Y N N N N N 26.633 11.126 8.436 -1.446 0.735 0.350 C9 A1B54 18 A1B54 C1 C14 C 0 1 Y N N N N N 26.307 9.792 8.688 -1.694 2.080 0.598 C1 A1B54 19 A1B54 O O3 O 0 1 N N N N N N 25.218 9.601 9.494 -0.659 2.960 0.674 O A1B54 20 A1B54 C C15 C 0 1 N N N N N N 24.770 8.262 9.701 -0.987 4.326 0.937 C A1B54 21 A1B54 S S1 S 0 1 N N N N N N 28.098 13.146 7.394 -2.206 -1.869 -0.035 S A1B54 22 A1B54 C3 C16 C 0 1 Y N N N N N 28.102 9.086 7.257 -4.049 1.631 0.696 C3 A1B54 23 A1B54 C2 C17 C 0 1 Y N N N N N 27.040 8.773 8.096 -2.996 2.524 0.773 C2 A1B54 24 A1B54 H6 H1 H 0 1 N N N N N N 29.268 10.640 6.350 -4.636 -0.402 0.400 H6 A1B54 25 A1B54 H7 H2 H 0 1 N N N N N N 28.976 12.393 5.281 -4.490 -2.235 0.632 H7 A1B54 26 A1B54 H10 H3 H 0 1 N N N N N N 29.976 14.613 4.595 -5.466 -2.539 -1.663 H10 A1B54 27 A1B54 H8 H4 H 0 1 N N N N N N 28.255 14.782 5.080 -4.634 -0.978 -1.464 H8 A1B54 28 A1B54 H9 H5 H 0 1 N N N N N N 29.560 15.272 6.213 -3.840 -2.303 -2.348 H9 A1B54 29 A1B54 H13 H6 H 0 1 N N N N N N 31.405 12.809 5.838 -3.355 -4.439 0.699 H13 A1B54 30 A1B54 H12 H7 H 0 1 N N N N N N 30.893 13.584 7.375 -4.803 -4.497 -0.335 H12 A1B54 31 A1B54 H11 H8 H 0 1 N N N N N N 30.588 11.835 7.107 -3.185 -4.405 -1.072 H11 A1B54 32 A1B54 H19 H9 H 0 1 N N N N N N 23.362 15.973 11.845 5.690 0.325 -0.253 H19 A1B54 33 A1B54 H20 H10 H 0 1 N N N N N N 22.046 14.829 12.276 4.828 -0.668 -1.452 H20 A1B54 34 A1B54 H21 H11 H 0 1 N N N N N N 23.865 13.936 15.972 4.082 -3.046 2.463 H21 A1B54 35 A1B54 H22 H12 H 0 1 N N N N N N 23.474 12.783 14.740 2.849 -1.910 2.354 H22 A1B54 36 A1B54 H H13 H 0 1 N N N N N N 23.718 13.026 12.635 3.643 0.372 1.162 H A1B54 37 A1B54 H17 H14 H 0 1 N N N N N N 22.338 15.096 9.788 3.999 2.128 -0.549 H17 A1B54 38 A1B54 H18 H15 H 0 1 N N N N N N 22.593 13.407 10.345 4.818 1.739 -2.082 H18 A1B54 39 A1B54 H15 H16 H 0 1 N N N N N N 24.714 15.480 9.634 2.927 0.347 -2.786 H15 A1B54 40 A1B54 H16 H17 H 0 1 N N N N N N 24.340 13.950 8.770 2.318 1.956 -2.321 H16 A1B54 41 A1B54 H23 H18 H 0 1 N N N N N N 25.773 15.222 12.016 1.713 -1.018 0.578 H23 A1B54 42 A1B54 H24 H19 H 0 1 N N N N N N 26.142 13.545 12.543 2.533 -1.591 -0.897 H24 A1B54 43 A1B54 H14 H20 H 0 1 N N N N N N 25.060 12.539 8.434 0.189 -0.491 0.665 H14 A1B54 44 A1B54 H2 H21 H 0 1 N N N N N N 23.893 8.267 10.365 -1.634 4.703 0.146 H2 A1B54 45 A1B54 H3 H22 H 0 1 N N N N N N 24.495 7.814 8.735 -1.503 4.398 1.894 H3 A1B54 46 A1B54 H1 H23 H 0 1 N N N N N N 25.576 7.673 10.162 -0.072 4.918 0.972 H1 A1B54 47 A1B54 H5 H24 H 0 1 N N N N N N 28.669 8.292 6.795 -5.062 1.981 0.833 H5 A1B54 48 A1B54 H4 H25 H 0 1 N N N N N N 26.786 7.741 8.287 -3.188 3.569 0.966 H4 A1B54 49 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B54 C O SING N N 1 A1B54 O C1 SING N N 2 A1B54 C1 C2 DOUB Y N 3 A1B54 C2 C3 SING Y N 4 A1B54 C3 C4 DOUB Y N 5 A1B54 C4 C5 SING Y N 6 A1B54 S C5 SING N N 7 A1B54 C6 S SING N N 8 A1B54 C7 C6 SING N N 9 A1B54 C8 C6 SING N N 10 A1B54 C5 C9 DOUB Y N 11 A1B54 C1 C9 SING Y N 12 A1B54 C9 N SING N N 13 A1B54 N C10 SING N N 14 A1B54 O1 C10 DOUB N N 15 A1B54 C10 N1 SING N N 16 A1B54 N1 C11 SING N N 17 A1B54 C11 C12 SING N N 18 A1B54 C12 C13 SING N N 19 A1B54 C13 C14 SING N N 20 A1B54 C14 C15 SING N N 21 A1B54 N2 C15 SING N N 22 A1B54 C15 O2 DOUB N N 23 A1B54 C16 C14 SING N N 24 A1B54 N1 C16 SING N N 25 A1B54 C4 H6 SING N N 26 A1B54 C6 H7 SING N N 27 A1B54 C7 H10 SING N N 28 A1B54 C7 H8 SING N N 29 A1B54 C7 H9 SING N N 30 A1B54 C8 H13 SING N N 31 A1B54 C8 H12 SING N N 32 A1B54 C8 H11 SING N N 33 A1B54 C13 H19 SING N N 34 A1B54 C13 H20 SING N N 35 A1B54 N2 H21 SING N N 36 A1B54 N2 H22 SING N N 37 A1B54 C14 H SING N N 38 A1B54 C12 H17 SING N N 39 A1B54 C12 H18 SING N N 40 A1B54 C11 H15 SING N N 41 A1B54 C11 H16 SING N N 42 A1B54 C16 H23 SING N N 43 A1B54 C16 H24 SING N N 44 A1B54 N H14 SING N N 45 A1B54 C H2 SING N N 46 A1B54 C H3 SING N N 47 A1B54 C H1 SING N N 48 A1B54 C3 H5 SING N N 49 A1B54 C2 H4 SING N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B54 SMILES ACDLabs 14.52 "O=C(Nc1c(OC)cccc1SC(C)C)N1CCCC(C1)C(N)=O" A1B54 InChI InChI 1.06 "InChI=1S/C17H25N3O3S/c1-11(2)24-14-8-4-7-13(23-3)15(14)19-17(22)20-9-5-6-12(10-20)16(18)21/h4,7-8,11-12H,5-6,9-10H2,1-3H3,(H2,18,21)(H,19,22)/t12-/m0/s1" A1B54 InChIKey InChI 1.06 OFDCWASTDCXECL-LBPRGKRZSA-N A1B54 SMILES_CANONICAL CACTVS 3.385 "COc1cccc(SC(C)C)c1NC(=O)N2CCC[C@@H](C2)C(N)=O" A1B54 SMILES CACTVS 3.385 "COc1cccc(SC(C)C)c1NC(=O)N2CCC[CH](C2)C(N)=O" A1B54 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CC(C)Sc1cccc(c1NC(=O)N2CCC[C@@H](C2)C(=O)N)OC" A1B54 SMILES "OpenEye OEToolkits" 3.1.0.0 "CC(C)Sc1cccc(c1NC(=O)N2CCCC(C2)C(=O)N)OC" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B54 "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-N~1~-{2-methoxy-6-[(propan-2-yl)sulfanyl]phenyl}piperidine-1,3-dicarboxamide" A1B54 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-~{N}1-(2-methoxy-6-propan-2-ylsulfanyl-phenyl)piperidine-1,3-dicarboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B54 "Create component" 2025-03-24 RCSB A1B54 "Initial release" 2025-04-02 RCSB #