data_A1B5B # _chem_comp.id A1B5B _chem_comp.name "(3R,5S)-1-{[2-(methylsulfanyl)phenyl]acetyl}piperidine-3,5-dicarboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H21 N3 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-24 _chem_comp.pdbx_modified_date 2025-03-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 335.421 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B5B _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I77 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B5B N1 N1 N 0 1 N N N N N N 21.555 14.955 8.507 -3.553 3.590 -0.368 N1 A1B5B 1 A1B5B C4 C1 C 0 1 Y N N N N N 28.625 10.296 7.033 4.280 -0.014 -2.527 C4 A1B5B 2 A1B5B C5 C2 C 0 1 Y N N N N N 27.938 11.389 7.529 3.016 -0.410 -2.130 C5 A1B5B 3 A1B5B C6 C3 C 0 1 Y N N N N N 26.844 11.227 8.375 2.693 -0.450 -0.788 C6 A1B5B 4 A1B5B C7 C4 C 0 1 N N N N N N 26.062 12.462 8.772 1.315 -0.882 -0.357 C7 A1B5B 5 A1B5B C8 C5 C 0 1 N N N N N N 26.211 12.835 10.242 0.445 0.334 -0.161 C8 A1B5B 6 A1B5B C10 C6 C 0 1 N N R N N N 23.089 14.610 10.338 -2.971 1.186 -0.410 C10 A1B5B 7 A1B5B C13 C7 C 0 1 N N S N N N 23.979 14.210 12.655 -2.679 -1.296 -0.368 C13 A1B5B 8 A1B5B C15 C8 C 0 1 N N N N N N 25.416 14.219 12.110 -1.402 -1.146 0.464 C15 A1B5B 9 A1B5B O2 O1 O 0 1 N N N N N N 24.480 15.728 14.453 -4.470 -2.621 0.413 O2 A1B5B 10 A1B5B C14 C9 C 0 1 N N N N N N 24.022 14.630 14.114 -3.344 -2.608 -0.037 C14 A1B5B 11 A1B5B N2 N2 N 0 1 N N N N N N 23.645 13.712 14.998 -2.687 -3.767 -0.240 N2 A1B5B 12 A1B5B C12 C10 C 0 1 N N N N N N 23.067 15.110 11.794 -3.633 -0.144 -0.043 C12 A1B5B 13 A1B5B C11 C11 C 0 1 N N N N N N 22.311 15.541 9.423 -3.924 2.318 -0.121 C11 A1B5B 14 A1B5B O1 O2 O 0 1 N N N N N N 22.405 16.772 9.534 -5.024 2.084 0.333 O1 A1B5B 15 A1B5B C9 C12 C 0 1 N N N N N N 24.531 14.606 9.817 -1.697 1.365 0.421 C9 A1B5B 16 A1B5B N N3 N 0 1 N N N N N N 25.414 13.834 10.696 -0.837 0.189 0.227 N A1B5B 17 A1B5B O O3 O 0 1 N N N N N N 27.026 12.295 10.966 0.900 1.441 -0.354 O A1B5B 18 A1B5B C1 C13 C 0 1 Y N N N N N 26.463 9.923 8.729 3.639 -0.091 0.164 C1 A1B5B 19 A1B5B S S1 S 0 1 N N N N N N 25.056 9.759 9.794 3.229 -0.133 1.877 S A1B5B 20 A1B5B C C14 C 0 1 N N N N N N 24.829 7.992 9.944 4.761 0.416 2.678 C A1B5B 21 A1B5B C3 C15 C 0 1 Y N N N N N 28.244 9.024 7.386 5.227 0.339 -1.582 C3 A1B5B 22 A1B5B C2 C16 C 0 1 Y N N N N N 27.158 8.823 8.231 4.909 0.307 -0.238 C2 A1B5B 23 A1B5B H13 H1 H 0 1 N N N N N N 21.027 15.510 7.865 -2.674 3.777 -0.731 H13 A1B5B 24 A1B5B H14 H2 H 0 1 N N N N N N 21.512 13.957 8.458 -4.168 4.318 -0.186 H14 A1B5B 25 A1B5B H7 H3 H 0 1 N N N N N N 29.462 10.443 6.367 4.530 0.016 -3.577 H7 A1B5B 26 A1B5B H8 H4 H 0 1 N N N N N N 28.255 12.385 7.256 2.281 -0.688 -2.870 H8 A1B5B 27 A1B5B H9 H5 H 0 1 N N N N N N 26.414 13.307 8.162 0.878 -1.522 -1.123 H9 A1B5B 28 A1B5B H10 H6 H 0 1 N N N N N N 24.997 12.280 8.566 1.384 -1.433 0.581 H10 A1B5B 29 A1B5B H H7 H 0 1 N N N N N N 22.670 13.594 10.287 -2.717 1.186 -1.470 H A1B5B 30 A1B5B H1 H8 H 0 1 N N N N N N 23.596 13.180 12.600 -2.428 -1.274 -1.428 H1 A1B5B 31 A1B5B H19 H9 H 0 1 N N N N N N 25.839 15.229 12.213 -1.639 -1.260 1.522 H19 A1B5B 32 A1B5B H20 H10 H 0 1 N N N N N N 26.028 13.506 12.682 -0.681 -1.908 0.168 H20 A1B5B 33 A1B5B H17 H11 H 0 1 N N N N N N 23.727 13.897 15.977 -1.786 -3.757 -0.599 H17 A1B5B 34 A1B5B H18 H12 H 0 1 N N N N N N 23.279 12.836 14.684 -3.114 -4.611 -0.027 H18 A1B5B 35 A1B5B H15 H13 H 0 1 N N N N N N 23.432 16.147 11.832 -3.865 -0.154 1.022 H15 A1B5B 36 A1B5B H16 H14 H 0 1 N N N N N N 22.038 15.069 12.181 -4.553 -0.262 -0.616 H16 A1B5B 37 A1B5B H11 H15 H 0 1 N N N N N N 24.895 15.643 9.764 -1.170 2.261 0.095 H11 A1B5B 38 A1B5B H12 H16 H 0 1 N N N N N N 24.547 14.160 8.812 -1.959 1.458 1.475 H12 A1B5B 39 A1B5B H3 H17 H 0 1 N N N N N N 23.967 7.787 10.595 4.622 0.429 3.759 H3 A1B5B 40 A1B5B H4 H18 H 0 1 N N N N N N 24.648 7.560 8.949 5.570 -0.269 2.423 H4 A1B5B 41 A1B5B H2 H19 H 0 1 N N N N N N 25.733 7.542 10.380 5.012 1.419 2.332 H2 A1B5B 42 A1B5B H6 H20 H 0 1 N N N N N N 28.792 8.175 7.005 6.213 0.647 -1.895 H6 A1B5B 43 A1B5B H5 H21 H 0 1 N N N N N N 26.856 7.822 8.499 5.647 0.586 0.499 H5 A1B5B 44 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B5B C S SING N N 1 A1B5B S C1 SING N N 2 A1B5B C1 C2 DOUB Y N 3 A1B5B C2 C3 SING Y N 4 A1B5B C3 C4 DOUB Y N 5 A1B5B C4 C5 SING Y N 6 A1B5B C5 C6 DOUB Y N 7 A1B5B C1 C6 SING Y N 8 A1B5B C6 C7 SING N N 9 A1B5B C7 C8 SING N N 10 A1B5B O C8 DOUB N N 11 A1B5B C8 N SING N N 12 A1B5B N C9 SING N N 13 A1B5B C9 C10 SING N N 14 A1B5B C11 C10 SING N N 15 A1B5B N1 C11 SING N N 16 A1B5B O1 C11 DOUB N N 17 A1B5B C10 C12 SING N N 18 A1B5B C12 C13 SING N N 19 A1B5B C13 C14 SING N N 20 A1B5B N2 C14 SING N N 21 A1B5B C14 O2 DOUB N N 22 A1B5B C15 C13 SING N N 23 A1B5B N C15 SING N N 24 A1B5B N1 H13 SING N N 25 A1B5B N1 H14 SING N N 26 A1B5B C4 H7 SING N N 27 A1B5B C5 H8 SING N N 28 A1B5B C7 H9 SING N N 29 A1B5B C7 H10 SING N N 30 A1B5B C10 H SING N N 31 A1B5B C13 H1 SING N N 32 A1B5B C15 H19 SING N N 33 A1B5B C15 H20 SING N N 34 A1B5B N2 H17 SING N N 35 A1B5B N2 H18 SING N N 36 A1B5B C12 H15 SING N N 37 A1B5B C12 H16 SING N N 38 A1B5B C9 H11 SING N N 39 A1B5B C9 H12 SING N N 40 A1B5B C H3 SING N N 41 A1B5B C H4 SING N N 42 A1B5B C H2 SING N N 43 A1B5B C3 H6 SING N N 44 A1B5B C2 H5 SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B5B SMILES ACDLabs 14.52 "O=C(Cc1ccccc1SC)N1CC(CC(C1)C(N)=O)C(N)=O" A1B5B InChI InChI 1.06 "InChI=1S/C16H21N3O3S/c1-23-13-5-3-2-4-10(13)7-14(20)19-8-11(15(17)21)6-12(9-19)16(18)22/h2-5,11-12H,6-9H2,1H3,(H2,17,21)(H2,18,22)/t11-,12+" A1B5B InChIKey InChI 1.06 QGOOPSUEGGPXHT-TXEJJXNPSA-N A1B5B SMILES_CANONICAL CACTVS 3.385 "CSc1ccccc1CC(=O)N2C[C@@H](C[C@@H](C2)C(N)=O)C(N)=O" A1B5B SMILES CACTVS 3.385 "CSc1ccccc1CC(=O)N2C[CH](C[CH](C2)C(N)=O)C(N)=O" A1B5B SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CSc1ccccc1CC(=O)N2C[C@@H](C[C@@H](C2)C(=O)N)C(=O)N" A1B5B SMILES "OpenEye OEToolkits" 3.1.0.0 "CSc1ccccc1CC(=O)N2CC(CC(C2)C(=O)N)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B5B "SYSTEMATIC NAME" ACDLabs 14.52 "(3R,5S)-1-{[2-(methylsulfanyl)phenyl]acetyl}piperidine-3,5-dicarboxamide" A1B5B "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S},5~{R})-1-[2-(2-methylsulfanylphenyl)ethanoyl]piperidine-3,5-dicarboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B5B "Create component" 2025-03-24 RCSB A1B5B "Initial release" 2025-04-02 RCSB #