data_A1B5F # _chem_comp.id A1B5F _chem_comp.name "(3S,5R)-5-methyl-1-{[2-(methylsulfanyl)phenyl]acetyl}piperidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H22 N2 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-24 _chem_comp.pdbx_modified_date 2025-03-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 306.423 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B5F _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I73 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B5F N1 N1 N 0 1 N N N N N N 10.962 15.509 17.418 -3.551 3.036 0.026 N1 A1B5F 1 A1B5F C4 C1 C 0 1 Y N N N N N 5.330 12.443 25.360 3.866 0.457 2.514 C4 A1B5F 2 A1B5F C5 C2 C 0 1 Y N N N N N 5.995 13.498 24.761 2.560 0.645 2.099 C5 A1B5F 3 A1B5F C6 C3 C 0 1 Y N N N N N 7.137 13.289 23.992 2.238 0.548 0.761 C6 A1B5F 4 A1B5F C7 C4 C 0 1 N N N N N N 7.935 14.491 23.546 0.814 0.753 0.310 C7 A1B5F 5 A1B5F C8 C5 C 0 1 N N N N N N 7.838 14.806 22.060 0.124 -0.583 0.204 C8 A1B5F 6 A1B5F C10 C6 C 0 1 N N R N N N 11.049 16.184 21.942 -3.141 -1.885 0.534 C10 A1B5F 7 A1B5F C13 C7 C 0 1 N N S N N N 10.127 16.006 19.622 -3.199 0.605 0.321 C13 A1B5F 8 A1B5F C15 C8 C 0 1 N N N N N N 8.712 16.174 20.185 -1.911 0.579 -0.508 C15 A1B5F 9 A1B5F O1 O1 O 0 1 N N N N N N 9.813 17.423 17.708 -5.155 1.610 -0.535 O1 A1B5F 10 A1B5F C14 C9 C 0 1 N N N N N N 10.278 16.369 18.155 -4.039 1.785 -0.094 C14 A1B5F 11 A1B5F C12 C10 C 0 1 N N N N N N 11.144 16.732 20.519 -3.981 -0.688 0.082 C12 A1B5F 12 A1B5F C11 C11 C 0 1 N N N N N N 12.045 16.862 22.862 -3.937 -3.175 0.326 C11 A1B5F 13 A1B5F C9 C12 C 0 1 N N N N N N 9.645 16.413 22.460 -1.852 -1.940 -0.292 C9 A1B5F 14 A1B5F N N2 N 0 1 N N N N N N 8.683 15.740 21.585 -1.165 -0.646 -0.184 N A1B5F 15 A1B5F O O2 O 0 1 N N N N N N 6.989 14.304 21.357 0.728 -1.601 0.468 O A1B5F 16 A1B5F C1 C13 C 0 1 Y N N N N N 7.582 11.974 23.806 3.228 0.260 -0.172 C1 A1B5F 17 A1B5F S S1 S 0 1 N N N N N N 8.962 11.722 22.728 2.820 0.128 -1.881 S A1B5F 18 A1B5F C C14 C 0 1 N N N N N N 9.230 9.954 22.762 4.416 -0.255 -2.652 C A1B5F 19 A1B5F C3 C15 C 0 1 Y N N N N N 5.787 11.159 25.190 4.855 0.177 1.589 C3 A1B5F 20 A1B5F C2 C16 C 0 1 Y N N N N N 6.908 10.915 24.412 4.539 0.072 0.248 C2 A1B5F 21 A1B5F H19 H1 H 0 1 N N N N N N 11.124 15.698 16.450 -2.658 3.176 0.379 H19 A1B5F 22 A1B5F H18 H2 H 0 1 N N N N N N 11.317 14.670 17.829 -4.090 3.795 -0.245 H18 A1B5F 23 A1B5F H7 H3 H 0 1 N N N N N N 4.452 12.629 25.961 4.115 0.534 3.562 H7 A1B5F 24 A1B5F H8 H4 H 0 1 N N N N N N 5.621 14.503 24.892 1.791 0.868 2.825 H8 A1B5F 25 A1B5F H9 H5 H 0 1 N N N N N N 7.576 15.367 24.106 0.290 1.376 1.035 H9 A1B5F 26 A1B5F H10 H6 H 0 1 N N N N N N 8.992 14.309 23.789 0.808 1.243 -0.663 H10 A1B5F 27 A1B5F H H7 H 0 1 N N N N N N 11.254 15.104 21.923 -2.892 -1.777 1.589 H A1B5F 28 A1B5F H1 H8 H 0 1 N N N N N N 10.362 14.934 19.700 -2.949 0.690 1.379 H1 A1B5F 29 A1B5F H20 H9 H 0 1 N N N N N N 8.417 17.232 20.124 -2.158 0.586 -1.569 H20 A1B5F 30 A1B5F H21 H10 H 0 1 N N N N N N 8.010 15.563 19.598 -1.304 1.452 -0.269 H21 A1B5F 31 A1B5F H16 H11 H 0 1 N N N N N N 10.924 17.810 20.525 -4.209 -0.784 -0.979 H16 A1B5F 32 A1B5F H17 H12 H 0 1 N N N N N N 12.160 16.568 20.130 -4.910 -0.661 0.652 H17 A1B5F 33 A1B5F H15 H13 H 0 1 N N N N N N 13.065 16.695 22.485 -4.185 -3.283 -0.730 H15 A1B5F 34 A1B5F H13 H14 H 0 1 N N N N N N 11.838 17.942 22.894 -3.338 -4.027 0.648 H13 A1B5F 35 A1B5F H14 H15 H 0 1 N N N N N N 11.955 16.441 23.874 -4.855 -3.134 0.912 H14 A1B5F 36 A1B5F H12 H16 H 0 1 N N N N N N 9.432 17.492 22.477 -1.206 -2.730 0.091 H12 A1B5F 37 A1B5F H11 H17 H 0 1 N N N N N N 9.560 16.007 23.479 -2.095 -2.141 -1.336 H11 A1B5F 38 A1B5F H3 H18 H 0 1 N N N N N N 10.080 9.699 22.112 4.283 -0.361 -3.729 H3 A1B5F 39 A1B5F H2 H19 H 0 1 N N N N N N 9.448 9.636 23.792 5.121 0.552 -2.451 H2 A1B5F 40 A1B5F H4 H20 H 0 1 N N N N N N 8.327 9.439 22.403 4.804 -1.187 -2.241 H4 A1B5F 41 A1B5F H6 H21 H 0 1 N N N N N N 5.271 10.337 25.664 5.874 0.031 1.915 H6 A1B5F 42 A1B5F H5 H22 H 0 1 N N N N N N 7.260 9.903 24.275 5.311 -0.151 -0.473 H5 A1B5F 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B5F C S SING N N 1 A1B5F S C1 SING N N 2 A1B5F C1 C2 DOUB Y N 3 A1B5F C2 C3 SING Y N 4 A1B5F C3 C4 DOUB Y N 5 A1B5F C4 C5 SING Y N 6 A1B5F C5 C6 DOUB Y N 7 A1B5F C1 C6 SING Y N 8 A1B5F C6 C7 SING N N 9 A1B5F C7 C8 SING N N 10 A1B5F O C8 DOUB N N 11 A1B5F C8 N SING N N 12 A1B5F N C9 SING N N 13 A1B5F C9 C10 SING N N 14 A1B5F C11 C10 SING N N 15 A1B5F C10 C12 SING N N 16 A1B5F C12 C13 SING N N 17 A1B5F C13 C14 SING N N 18 A1B5F N1 C14 SING N N 19 A1B5F C14 O1 DOUB N N 20 A1B5F C15 C13 SING N N 21 A1B5F N C15 SING N N 22 A1B5F N1 H19 SING N N 23 A1B5F N1 H18 SING N N 24 A1B5F C4 H7 SING N N 25 A1B5F C5 H8 SING N N 26 A1B5F C7 H9 SING N N 27 A1B5F C7 H10 SING N N 28 A1B5F C10 H SING N N 29 A1B5F C13 H1 SING N N 30 A1B5F C15 H20 SING N N 31 A1B5F C15 H21 SING N N 32 A1B5F C12 H16 SING N N 33 A1B5F C12 H17 SING N N 34 A1B5F C11 H15 SING N N 35 A1B5F C11 H13 SING N N 36 A1B5F C11 H14 SING N N 37 A1B5F C9 H12 SING N N 38 A1B5F C9 H11 SING N N 39 A1B5F C H3 SING N N 40 A1B5F C H2 SING N N 41 A1B5F C H4 SING N N 42 A1B5F C3 H6 SING N N 43 A1B5F C2 H5 SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B5F SMILES ACDLabs 14.52 "CC1CC(CN(C1)C(=O)Cc1ccccc1SC)C(N)=O" A1B5F InChI InChI 1.06 "InChI=1S/C16H22N2O2S/c1-11-7-13(16(17)20)10-18(9-11)15(19)8-12-5-3-4-6-14(12)21-2/h3-6,11,13H,7-10H2,1-2H3,(H2,17,20)/t11-,13+/m1/s1" A1B5F InChIKey InChI 1.06 KCUWPJSIVYQWJM-YPMHNXCESA-N A1B5F SMILES_CANONICAL CACTVS 3.385 "CSc1ccccc1CC(=O)N2C[C@H](C)C[C@@H](C2)C(N)=O" A1B5F SMILES CACTVS 3.385 "CSc1ccccc1CC(=O)N2C[CH](C)C[CH](C2)C(N)=O" A1B5F SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "C[C@@H]1C[C@@H](CN(C1)C(=O)Cc2ccccc2SC)C(=O)N" A1B5F SMILES "OpenEye OEToolkits" 3.1.0.0 "CC1CC(CN(C1)C(=O)Cc2ccccc2SC)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B5F "SYSTEMATIC NAME" ACDLabs 14.52 "(3S,5R)-5-methyl-1-{[2-(methylsulfanyl)phenyl]acetyl}piperidine-3-carboxamide" A1B5F "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S},5~{R})-5-methyl-1-[2-(2-methylsulfanylphenyl)ethanoyl]piperidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B5F "Create component" 2025-03-24 RCSB A1B5F "Initial release" 2025-04-02 RCSB #