data_A1B5H # _chem_comp.id A1B5H _chem_comp.name "(3S)-1-{2-[2-(methylsulfanyl)phenyl]ethyl}-5-oxopyrrolidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H18 N2 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-24 _chem_comp.pdbx_modified_date 2025-03-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 278.370 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B5H _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I6W _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B5H N1 N1 N 0 1 N N N N N N 11.007 15.449 17.312 5.869 -0.654 0.481 N1 A1B5H 1 A1B5H C4 C1 C 0 1 Y N N N N N 5.870 13.091 25.453 -4.347 1.998 -0.009 C4 A1B5H 2 A1B5H C5 C2 C 0 1 Y N N N N N 6.495 14.015 24.634 -2.994 1.963 0.277 C5 A1B5H 3 A1B5H C6 C3 C 0 1 Y N N N N N 7.394 13.609 23.651 -2.332 0.753 0.343 C6 A1B5H 4 A1B5H C7 C4 C 0 1 N N N N N N 7.886 14.624 22.642 -0.858 0.717 0.654 C7 A1B5H 5 A1B5H C8 C5 C 0 1 N N N N N N 9.251 15.199 23.002 -0.061 0.666 -0.651 C8 A1B5H 6 A1B5H C10 C6 C 0 1 N N S N N N 10.908 15.795 19.699 3.446 -0.161 0.556 C10 A1B5H 7 A1B5H C13 C7 C 0 1 N N N N N N 10.985 16.612 21.944 2.146 1.721 -0.214 C13 A1B5H 8 A1B5H O1 O1 O 0 1 N N N N N N 11.384 17.090 22.998 1.761 2.865 -0.333 O1 A1B5H 9 A1B5H C12 C8 C 0 1 N N N N N N 11.462 16.940 20.557 3.567 1.314 0.107 C12 A1B5H 10 A1B5H C11 C9 C 0 1 N N N N N N 10.577 16.238 18.283 4.624 -0.969 0.075 C11 A1B5H 11 A1B5H O O2 O 0 1 N N N N N N 9.905 17.257 18.069 4.450 -1.903 -0.679 O A1B5H 12 A1B5H C9 C10 C 0 1 N N N N N N 9.661 15.358 20.461 2.146 -0.601 -0.152 C9 A1B5H 13 A1B5H N N2 N 0 1 N N N N N N 9.990 15.719 21.846 1.372 0.631 -0.348 N A1B5H 14 A1B5H C1 C11 C 0 1 Y N N N N N 7.691 12.245 23.539 -3.026 -0.430 0.121 C1 A1B5H 15 A1B5H S S1 S 0 1 N N N N N N 8.902 11.770 22.341 -2.183 -1.976 0.198 S A1B5H 16 A1B5H C C12 C 0 1 N N N N N N 9.117 10.016 22.632 -3.496 -3.175 -0.162 C A1B5H 17 A1B5H C3 C13 C 0 1 Y N N N N N 6.135 11.749 25.309 -5.042 0.822 -0.224 C3 A1B5H 18 A1B5H C2 C14 C 0 1 Y N N N N N 7.046 11.316 24.358 -4.385 -0.391 -0.165 C2 A1B5H 19 A1B5H H15 H1 H 0 1 N N N N N N 10.792 15.666 16.360 6.008 0.094 1.084 H15 A1B5H 20 A1B5H H14 H2 H 0 1 N N N N N N 11.547 14.636 17.530 6.627 -1.176 0.174 H14 A1B5H 21 A1B5H H6 H3 H 0 1 N N N N N N 5.172 13.424 26.207 -4.863 2.945 -0.060 H6 A1B5H 22 A1B5H H7 H4 H 0 1 N N N N N N 6.282 15.066 24.759 -2.455 2.883 0.448 H7 A1B5H 23 A1B5H H9 H5 H 0 1 N N N N N N 7.958 14.136 21.659 -0.582 1.611 1.214 H9 A1B5H 24 A1B5H H8 H6 H 0 1 N N N N N N 7.160 15.448 22.590 -0.634 -0.168 1.250 H8 A1B5H 25 A1B5H H10 H7 H 0 1 N N N N N N 9.105 16.020 23.720 -0.337 -0.228 -1.211 H10 A1B5H 26 A1B5H H11 H8 H 0 1 N N N N N N 9.851 14.405 23.470 -0.285 1.551 -1.248 H11 A1B5H 27 A1B5H H H9 H 0 1 N N N N N N 11.635 14.970 19.671 3.344 -0.232 1.639 H A1B5H 28 A1B5H H16 H10 H 0 1 N N N N N N 12.561 16.964 20.516 3.966 1.927 0.915 H16 A1B5H 29 A1B5H H17 H11 H 0 1 N N N N N N 11.061 17.909 20.224 4.196 1.393 -0.780 H17 A1B5H 30 A1B5H H13 H12 H 0 1 N N N N N N 9.494 14.275 20.362 2.376 -1.059 -1.114 H13 A1B5H 31 A1B5H H12 H13 H 0 1 N N N N N N 8.771 15.900 20.110 1.593 -1.300 0.475 H12 A1B5H 32 A1B5H H2 H14 H 0 1 N N N N N N 9.862 9.616 21.928 -3.083 -4.183 -0.141 H2 A1B5H 33 A1B5H H1 H15 H 0 1 N N N N N N 9.464 9.855 23.663 -4.282 -3.089 0.589 H1 A1B5H 34 A1B5H H3 H16 H 0 1 N N N N N N 8.157 9.499 22.483 -3.912 -2.973 -1.148 H3 A1B5H 35 A1B5H H5 H17 H 0 1 N N N N N N 5.632 11.030 25.939 -6.098 0.853 -0.447 H5 A1B5H 36 A1B5H H4 H18 H 0 1 N N N N N N 7.256 10.262 24.251 -4.927 -1.309 -0.338 H4 A1B5H 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B5H C S SING N N 1 A1B5H S C1 SING N N 2 A1B5H C1 C2 DOUB Y N 3 A1B5H C2 C3 SING Y N 4 A1B5H C3 C4 DOUB Y N 5 A1B5H C4 C5 SING Y N 6 A1B5H C5 C6 DOUB Y N 7 A1B5H C1 C6 SING Y N 8 A1B5H C6 C7 SING N N 9 A1B5H C7 C8 SING N N 10 A1B5H C8 N SING N N 11 A1B5H N C9 SING N N 12 A1B5H C9 C10 SING N N 13 A1B5H C11 C10 SING N N 14 A1B5H N1 C11 SING N N 15 A1B5H O C11 DOUB N N 16 A1B5H C10 C12 SING N N 17 A1B5H C12 C13 SING N N 18 A1B5H N C13 SING N N 19 A1B5H C13 O1 DOUB N N 20 A1B5H N1 H15 SING N N 21 A1B5H N1 H14 SING N N 22 A1B5H C4 H6 SING N N 23 A1B5H C5 H7 SING N N 24 A1B5H C7 H9 SING N N 25 A1B5H C7 H8 SING N N 26 A1B5H C8 H10 SING N N 27 A1B5H C8 H11 SING N N 28 A1B5H C10 H SING N N 29 A1B5H C12 H16 SING N N 30 A1B5H C12 H17 SING N N 31 A1B5H C9 H13 SING N N 32 A1B5H C9 H12 SING N N 33 A1B5H C H2 SING N N 34 A1B5H C H1 SING N N 35 A1B5H C H3 SING N N 36 A1B5H C3 H5 SING N N 37 A1B5H C2 H4 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B5H SMILES ACDLabs 14.52 "NC(=O)C1CC(=O)N(CCc2ccccc2SC)C1" A1B5H InChI InChI 1.06 "InChI=1S/C14H18N2O2S/c1-19-12-5-3-2-4-10(12)6-7-16-9-11(14(15)18)8-13(16)17/h2-5,11H,6-9H2,1H3,(H2,15,18)/t11-/m0/s1" A1B5H InChIKey InChI 1.06 IVNOXRPABJYKCG-NSHDSACASA-N A1B5H SMILES_CANONICAL CACTVS 3.385 "CSc1ccccc1CCN2C[C@H](CC2=O)C(N)=O" A1B5H SMILES CACTVS 3.385 "CSc1ccccc1CCN2C[CH](CC2=O)C(N)=O" A1B5H SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CSc1ccccc1CCN2C[C@H](CC2=O)C(=O)N" A1B5H SMILES "OpenEye OEToolkits" 3.1.0.0 "CSc1ccccc1CCN2CC(CC2=O)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B5H "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-1-{2-[2-(methylsulfanyl)phenyl]ethyl}-5-oxopyrrolidine-3-carboxamide" A1B5H "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-1-[2-(2-methylsulfanylphenyl)ethyl]-5-oxidanylidene-pyrrolidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B5H "Create component" 2025-03-24 RCSB A1B5H "Initial release" 2025-04-02 RCSB #