data_A1B5P # _chem_comp.id A1B5P _chem_comp.name "(3S)-1-[2-(6-cyano-2-methyl-1H-indol-3-yl)ethyl]-6-oxopiperidine-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H20 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-24 _chem_comp.pdbx_modified_date 2025-03-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 324.377 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B5P _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I7H _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B5P N1 N1 N 0 1 N N N N N N 4.967 10.198 28.914 -6.960 -2.684 -0.389 N1 A1B5P 1 A1B5P N3 N2 N 0 1 N N N N N N 11.706 13.550 17.732 5.826 -2.496 0.749 N3 A1B5P 2 A1B5P C4 C1 C 0 1 Y N N N N N 6.606 10.346 26.915 -4.796 -1.338 -0.069 C4 A1B5P 3 A1B5P C5 C2 C 0 1 N N N N N N 5.693 10.242 28.025 -6.003 -2.088 -0.247 C5 A1B5P 4 A1B5P C6 C3 C 0 1 Y N N N N N 7.222 11.568 26.642 -3.581 -2.008 0.135 C6 A1B5P 5 A1B5P C7 C4 C 0 1 Y N N N N N 8.150 11.674 25.620 -2.427 -1.304 0.306 C7 A1B5P 6 A1B5P C8 C5 C 0 1 Y N N N N N 8.488 10.556 24.857 -2.450 0.094 0.278 C8 A1B5P 7 A1B5P C10 C6 C 0 1 N N N N N N 10.438 11.279 23.234 0.047 0.902 0.659 C10 A1B5P 8 A1B5P C13 C7 C 0 1 N N S N N N 11.855 14.062 20.082 4.038 -0.839 0.333 C13 A1B5P 9 A1B5P C15 C8 C 0 1 N N N N N N 12.577 15.208 20.812 4.972 0.165 -0.354 C15 A1B5P 10 A1B5P C17 C9 C 0 1 N N N N N N 11.897 14.026 22.998 2.987 1.656 -0.349 C17 A1B5P 11 A1B5P O1 O1 O 0 1 N N N N N N 11.970 13.928 24.225 2.486 2.751 -0.488 O1 A1B5P 12 A1B5P C16 C10 C 0 1 N N N N N N 12.968 14.762 22.226 4.459 1.578 -0.065 C16 A1B5P 13 A1B5P C14 C11 C 0 1 N N N N N N 11.460 14.458 18.669 4.616 -2.226 0.221 C14 A1B5P 14 A1B5P O O2 O 0 1 N N N N N N 10.856 15.521 18.445 3.992 -3.099 -0.344 O A1B5P 15 A1B5P C12 C12 C 0 1 N N N N N N 10.572 13.753 20.871 2.674 -0.791 -0.357 C12 A1B5P 16 A1B5P N2 N3 N 0 1 N N N N N N 10.850 13.530 22.296 2.200 0.584 -0.455 N2 A1B5P 17 A1B5P C11 C13 C 0 1 N N N N N N 9.871 12.672 22.976 0.770 0.803 -0.685 C11 A1B5P 18 A1B5P C9 C14 C 0 1 Y N N N N N 9.479 10.287 23.839 -1.425 1.127 0.423 C9 A1B5P 19 A1B5P C1 C15 C 0 1 Y N N N N N 9.429 8.943 23.573 -2.043 2.315 0.305 C1 A1B5P 20 A1B5P C C16 C 0 1 N N N N N N 10.332 8.083 22.745 -1.362 3.656 0.390 C A1B5P 21 A1B5P C2 C17 C 0 1 Y N N N N N 7.853 9.331 25.143 -3.665 0.778 0.074 C2 A1B5P 22 A1B5P N N4 N 0 1 Y N N N N N 8.437 8.365 24.334 -3.380 2.126 0.096 N A1B5P 23 A1B5P C3 C18 C 0 1 Y N N N N N 6.901 9.212 26.149 -4.834 0.055 -0.104 C3 A1B5P 24 A1B5P H15 H1 H 0 1 N N N N N N 11.401 13.706 16.793 6.325 -1.798 1.201 H15 A1B5P 25 A1B5P H14 H2 H 0 1 N N N N N N 12.197 12.711 17.966 6.197 -3.390 0.681 H14 A1B5P 26 A1B5P H6 H3 H 0 1 N N N N N N 6.973 12.437 27.232 -3.561 -3.087 0.157 H6 A1B5P 27 A1B5P H7 H4 H 0 1 N N N N N N 8.614 12.627 25.412 -1.495 -1.826 0.463 H7 A1B5P 28 A1B5P H8 H5 H 0 1 N N N N N N 11.293 11.383 23.918 0.188 -0.023 1.217 H8 A1B5P 29 A1B5P H9 H6 H 0 1 N N N N N N 10.785 10.871 22.273 0.454 1.737 1.230 H9 A1B5P 30 A1B5P H1 H7 H 0 1 N N N N N N 12.500 13.172 20.057 3.925 -0.573 1.384 H1 A1B5P 31 A1B5P H17 H8 H 0 1 N N N N N N 13.483 15.483 20.253 5.982 0.053 0.038 H17 A1B5P 32 A1B5P H16 H9 H 0 1 N N N N N N 11.908 16.078 20.876 4.973 -0.012 -1.429 H16 A1B5P 33 A1B5P H19 H10 H 0 1 N N N N N N 13.841 14.098 22.142 4.640 1.822 0.982 H19 A1B5P 34 A1B5P H18 H11 H 0 1 N N N N N N 13.243 15.659 22.800 4.988 2.291 -0.698 H18 A1B5P 35 A1B5P H13 H12 H 0 1 N N N N N N 10.106 12.849 20.453 2.762 -1.214 -1.358 H13 A1B5P 36 A1B5P H12 H13 H 0 1 N N N N N N 9.879 14.602 20.772 1.957 -1.375 0.219 H12 A1B5P 37 A1B5P H11 H14 H 0 1 N N N N N N 8.974 12.582 22.345 0.362 -0.032 -1.256 H11 A1B5P 38 A1B5P H10 H15 H 0 1 N N N N N N 9.599 13.132 23.938 0.629 1.728 -1.243 H10 A1B5P 39 A1B5P H3 H16 H 0 1 N N N N N N 9.923 7.994 21.728 -1.358 3.997 1.425 H3 A1B5P 40 A1B5P H4 H17 H 0 1 N N N N N N 11.332 8.539 22.700 -0.336 3.566 0.033 H4 A1B5P 41 A1B5P H2 H18 H 0 1 N N N N N N 10.405 7.084 23.199 -1.899 4.376 -0.228 H2 A1B5P 42 A1B5P H H19 H 0 1 N N N N N N 8.178 7.400 24.308 -4.032 2.836 -0.019 H A1B5P 43 A1B5P H5 H20 H 0 1 N N N N N N 6.403 8.272 26.334 -5.772 0.568 -0.261 H5 A1B5P 44 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B5P C C1 SING N N 1 A1B5P C1 N SING Y N 2 A1B5P N C2 SING Y N 3 A1B5P C2 C3 DOUB Y N 4 A1B5P C3 C4 SING Y N 5 A1B5P C5 C4 SING N N 6 A1B5P N1 C5 TRIP N N 7 A1B5P C4 C6 DOUB Y N 8 A1B5P C6 C7 SING Y N 9 A1B5P C7 C8 DOUB Y N 10 A1B5P C2 C8 SING Y N 11 A1B5P C8 C9 SING Y N 12 A1B5P C1 C9 DOUB Y N 13 A1B5P C9 C10 SING N N 14 A1B5P C10 C11 SING N N 15 A1B5P C11 N2 SING N N 16 A1B5P N2 C12 SING N N 17 A1B5P C12 C13 SING N N 18 A1B5P C14 C13 SING N N 19 A1B5P N3 C14 SING N N 20 A1B5P O C14 DOUB N N 21 A1B5P C13 C15 SING N N 22 A1B5P C15 C16 SING N N 23 A1B5P C16 C17 SING N N 24 A1B5P N2 C17 SING N N 25 A1B5P C17 O1 DOUB N N 26 A1B5P N3 H15 SING N N 27 A1B5P N3 H14 SING N N 28 A1B5P C6 H6 SING N N 29 A1B5P C7 H7 SING N N 30 A1B5P C10 H8 SING N N 31 A1B5P C10 H9 SING N N 32 A1B5P C13 H1 SING N N 33 A1B5P C15 H17 SING N N 34 A1B5P C15 H16 SING N N 35 A1B5P C16 H19 SING N N 36 A1B5P C16 H18 SING N N 37 A1B5P C12 H13 SING N N 38 A1B5P C12 H12 SING N N 39 A1B5P C11 H11 SING N N 40 A1B5P C11 H10 SING N N 41 A1B5P C H3 SING N N 42 A1B5P C H4 SING N N 43 A1B5P C H2 SING N N 44 A1B5P N H SING N N 45 A1B5P C3 H5 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B5P SMILES ACDLabs 14.52 "NC(=O)C1CCC(=O)N(CCc2c3ccc(C#N)cc3[NH]c2C)C1" A1B5P InChI InChI 1.06 "InChI=1S/C18H20N4O2/c1-11-14(15-4-2-12(9-19)8-16(15)21-11)6-7-22-10-13(18(20)24)3-5-17(22)23/h2,4,8,13,21H,3,5-7,10H2,1H3,(H2,20,24)/t13-/m0/s1" A1B5P InChIKey InChI 1.06 JJVAWSBGUDDHFE-ZDUSSCGKSA-N A1B5P SMILES_CANONICAL CACTVS 3.385 "Cc1[nH]c2cc(ccc2c1CCN3C[C@H](CCC3=O)C(N)=O)C#N" A1B5P SMILES CACTVS 3.385 "Cc1[nH]c2cc(ccc2c1CCN3C[CH](CCC3=O)C(N)=O)C#N" A1B5P SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1c(c2ccc(cc2[nH]1)C#N)CCN3C[C@H](CCC3=O)C(=O)N" A1B5P SMILES "OpenEye OEToolkits" 3.1.0.0 "Cc1c(c2ccc(cc2[nH]1)C#N)CCN3CC(CCC3=O)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B5P "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-1-[2-(6-cyano-2-methyl-1H-indol-3-yl)ethyl]-6-oxopiperidine-3-carboxamide" A1B5P "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{S})-1-[2-(6-cyano-2-methyl-1~{H}-indol-3-yl)ethyl]-6-oxidanylidene-piperidine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B5P "Create component" 2025-03-24 RCSB A1B5P "Initial release" 2025-04-02 RCSB #