data_A1B5Y # _chem_comp.id A1B5Y _chem_comp.name "(1S,4S,6R)-2-{[2-(methylsulfanyl)phenyl]acetyl}-2-azabicyclo[4.1.0]heptane-4-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H20 N2 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-03-24 _chem_comp.pdbx_modified_date 2025-03-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 304.407 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B5Y _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I78 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B5Y N1 N1 N 0 1 N N N N N N 11.088 13.765 17.739 -3.685 2.553 -1.265 N1 A1B5Y 1 A1B5Y C4 C1 C 0 1 Y N N N N N 6.572 10.420 26.162 3.985 1.869 1.604 C4 A1B5Y 2 A1B5Y C5 C2 C 0 1 Y N N N N N 7.222 11.533 25.659 2.641 1.800 1.280 C5 A1B5Y 3 A1B5Y C6 C3 C 0 1 Y N N N N N 8.411 11.407 24.948 2.211 0.933 0.296 C6 A1B5Y 4 A1B5Y C7 C4 C 0 1 N N N N N N 9.064 12.625 24.337 0.747 0.858 -0.056 C7 A1B5Y 5 A1B5Y C8 C5 C 0 1 N N N N N N 9.090 12.525 22.823 0.103 -0.266 0.714 C8 A1B5Y 6 A1B5Y C10 C6 C 0 1 N N S N N N 11.308 13.920 20.136 -3.382 0.578 0.193 C10 A1B5Y 7 A1B5Y C13 C7 C 0 1 N N S N N N 12.471 14.137 22.290 -3.347 -1.671 1.348 C13 A1B5Y 8 A1B5Y C15 C8 C 0 1 N N R N N N 11.485 13.140 22.803 -1.824 -1.614 1.309 C15 A1B5Y 9 A1B5Y O1 O1 O 0 1 N N N N N N 10.617 15.726 18.716 -5.204 0.936 -1.264 O1 A1B5Y 10 A1B5Y C11 C9 C 0 1 N N N N N N 10.973 14.550 18.795 -4.156 1.367 -0.831 C11 A1B5Y 11 A1B5Y C9 C10 C 0 1 N N N N N N 9.988 13.504 20.790 -1.998 0.294 -0.356 C9 A1B5Y 12 A1B5Y C12 C11 C 0 1 N N N N N N 12.049 14.906 21.043 -4.158 -0.678 0.527 C12 A1B5Y 13 A1B5Y C14 C12 C 0 1 N N N N N N 11.790 14.365 23.604 -2.551 -2.722 0.560 C14 A1B5Y 14 A1B5Y N N2 N 0 1 N N N N N N 10.158 13.021 22.163 -1.211 -0.523 0.558 N A1B5Y 15 A1B5Y O O2 O 0 1 N N N N N N 8.173 12.001 22.223 0.766 -0.940 1.472 O A1B5Y 16 A1B5Y C1 C13 C 0 1 Y N N N N N 8.937 10.126 24.764 3.128 0.130 -0.371 C1 A1B5Y 17 A1B5Y S S1 S 0 1 N N N N N N 10.412 9.999 23.809 2.582 -0.983 -1.623 S A1B5Y 18 A1B5Y C C14 C 0 1 N N N N N N 10.135 8.515 22.923 4.121 -1.780 -2.160 C A1B5Y 19 A1B5Y C3 C15 C 0 1 Y N N N N N 7.099 9.165 25.971 4.901 1.076 0.939 C3 A1B5Y 20 A1B5Y C2 C16 C 0 1 Y N N N N N 8.283 9.008 25.276 4.477 0.202 -0.043 C2 A1B5Y 21 A1B5Y H15 H1 H 0 1 N N N N N N 10.882 14.120 16.827 -2.847 2.898 -0.919 H15 A1B5Y 22 A1B5Y H14 H2 H 0 1 N N N N N N 11.381 12.815 17.851 -4.182 3.059 -1.927 H14 A1B5Y 23 A1B5Y H8 H3 H 0 1 N N N N N N 5.647 10.538 26.707 4.319 2.548 2.374 H8 A1B5Y 24 A1B5Y H9 H4 H 0 1 N N N N N N 6.800 12.514 25.821 1.929 2.424 1.799 H9 A1B5Y 25 A1B5Y H11 H5 H 0 1 N N N N N N 8.497 13.522 24.629 0.263 1.800 0.203 H11 A1B5Y 26 A1B5Y H10 H6 H 0 1 N N N N N N 10.096 12.706 24.710 0.639 0.675 -1.125 H10 A1B5Y 27 A1B5Y H H7 H 0 1 N N N N N N 11.933 13.029 19.978 -3.283 1.179 1.096 H A1B5Y 28 A1B5Y H1 H8 H 0 1 N N N N N N 13.530 13.844 22.335 -3.806 -1.989 2.284 H1 A1B5Y 29 A1B5Y H2 H9 H 0 1 N N N N N N 11.915 12.204 23.188 -1.297 -1.897 2.219 H2 A1B5Y 30 A1B5Y H13 H10 H 0 1 N N N N N N 9.537 12.701 20.189 -2.094 -0.230 -1.308 H13 A1B5Y 31 A1B5Y H12 H11 H 0 1 N N N N N N 9.315 14.374 20.805 -1.480 1.239 -0.522 H12 A1B5Y 32 A1B5Y H17 H12 H 0 1 N N N N N N 12.935 15.302 20.526 -5.049 -0.401 1.090 H17 A1B5Y 33 A1B5Y H16 H13 H 0 1 N N N N N N 11.384 15.738 21.319 -4.466 -1.158 -0.401 H16 A1B5Y 34 A1B5Y H18 H14 H 0 1 N N N N N N 12.360 14.282 24.541 -2.498 -3.728 0.974 H18 A1B5Y 35 A1B5Y H19 H15 H 0 1 N N N N N N 11.036 15.160 23.703 -2.578 -2.662 -0.528 H19 A1B5Y 36 A1B5Y H4 H16 H 0 1 N N N N N N 10.998 8.310 22.272 4.808 -1.025 -2.541 H4 A1B5Y 37 A1B5Y H3 H17 H 0 1 N N N N N N 10.005 7.684 23.632 4.578 -2.293 -1.314 H3 A1B5Y 38 A1B5Y H5 H18 H 0 1 N N N N N N 9.228 8.619 22.309 3.901 -2.502 -2.947 H5 A1B5Y 39 A1B5Y H7 H19 H 0 1 N N N N N N 6.587 8.300 26.365 5.949 1.133 1.194 H7 A1B5Y 40 A1B5Y H6 H20 H 0 1 N N N N N N 8.700 8.022 25.130 5.193 -0.421 -0.559 H6 A1B5Y 41 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B5Y C S SING N N 1 A1B5Y S C1 SING N N 2 A1B5Y C1 C2 DOUB Y N 3 A1B5Y C2 C3 SING Y N 4 A1B5Y C3 C4 DOUB Y N 5 A1B5Y C4 C5 SING Y N 6 A1B5Y C5 C6 DOUB Y N 7 A1B5Y C1 C6 SING Y N 8 A1B5Y C6 C7 SING N N 9 A1B5Y C7 C8 SING N N 10 A1B5Y O C8 DOUB N N 11 A1B5Y C8 N SING N N 12 A1B5Y N C9 SING N N 13 A1B5Y C9 C10 SING N N 14 A1B5Y C10 C11 SING N N 15 A1B5Y N1 C11 SING N N 16 A1B5Y C11 O1 DOUB N N 17 A1B5Y C12 C10 SING N N 18 A1B5Y C13 C12 SING N N 19 A1B5Y C13 C14 SING N N 20 A1B5Y C14 C15 SING N N 21 A1B5Y C15 C13 SING N N 22 A1B5Y N C15 SING N N 23 A1B5Y N1 H15 SING N N 24 A1B5Y N1 H14 SING N N 25 A1B5Y C4 H8 SING N N 26 A1B5Y C5 H9 SING N N 27 A1B5Y C7 H11 SING N N 28 A1B5Y C7 H10 SING N N 29 A1B5Y C10 H SING N N 30 A1B5Y C13 H1 SING N N 31 A1B5Y C15 H2 SING N N 32 A1B5Y C9 H13 SING N N 33 A1B5Y C9 H12 SING N N 34 A1B5Y C12 H17 SING N N 35 A1B5Y C12 H16 SING N N 36 A1B5Y C14 H18 SING N N 37 A1B5Y C14 H19 SING N N 38 A1B5Y C H4 SING N N 39 A1B5Y C H3 SING N N 40 A1B5Y C H5 SING N N 41 A1B5Y C3 H7 SING N N 42 A1B5Y C2 H6 SING N N 43 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B5Y SMILES ACDLabs 14.52 "O=C(Cc1ccccc1SC)N1CC(CC2CC21)C(N)=O" A1B5Y InChI InChI 1.06 "InChI=1S/C16H20N2O2S/c1-21-14-5-3-2-4-10(14)8-15(19)18-9-12(16(17)20)6-11-7-13(11)18/h2-5,11-13H,6-9H2,1H3,(H2,17,20)/t11?,12-,13+/m0/s1" A1B5Y InChIKey InChI 1.06 POUPHNLBVXGGPW-LWNNLKQOSA-N A1B5Y SMILES_CANONICAL CACTVS 3.385 "CSc1ccccc1CC(=O)N2C[C@H](C[C@H]3C[C@@H]23)C(N)=O" A1B5Y SMILES CACTVS 3.385 "CSc1ccccc1CC(=O)N2C[CH](C[CH]3C[CH]23)C(N)=O" A1B5Y SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CSc1ccccc1CC(=O)N2C[C@H](C[C@@H]3[C@H]2C3)C(=O)N" A1B5Y SMILES "OpenEye OEToolkits" 3.1.0.0 "CSc1ccccc1CC(=O)N2CC(CC3C2C3)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B5Y "SYSTEMATIC NAME" ACDLabs 14.52 "(1S,4S,6R)-2-{[2-(methylsulfanyl)phenyl]acetyl}-2-azabicyclo[4.1.0]heptane-4-carboxamide" A1B5Y "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(1~{R},4~{S},6~{S})-2-[2-(2-methylsulfanylphenyl)ethanoyl]-2-azabicyclo[4.1.0]heptane-4-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B5Y "Create component" 2025-03-24 RCSB A1B5Y "Initial release" 2025-04-02 RCSB #