data_A1B7U # _chem_comp.id A1B7U _chem_comp.name "5-({N-[(2,3-dichlorophenyl)methyl]-3,5-difluorobenzamido}methyl)-3-(methylamino)pyridine-2-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H17 Cl2 F2 N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-04-04 _chem_comp.pdbx_modified_date 2025-05-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 480.291 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B7U _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9O0X _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B7U C4 C1 C 0 1 Y N N N N N 40.775 16.240 12.122 2.316 1.352 -0.980 C4 A1B7U 1 A1B7U C5 C2 C 0 1 Y N N N N N 39.555 16.209 11.454 1.476 1.468 0.112 C5 A1B7U 2 A1B7U C6 C3 C 0 1 Y N N N N N 39.008 14.972 11.182 2.020 1.615 1.380 C6 A1B7U 3 A1B7U C8 C4 C 0 1 Y N N N N N 40.748 13.824 12.156 4.171 1.543 0.546 C8 A1B7U 4 A1B7U C15 C5 C 0 1 Y N N N N N 40.460 19.098 8.895 -2.912 0.100 0.217 C15 A1B7U 5 A1B7U C17 C6 C 0 1 Y N N N N N 42.168 20.523 9.835 -4.805 -0.505 -1.119 C17 A1B7U 6 A1B7U C20 C7 C 0 1 Y N N N N N 39.843 20.228 8.367 -3.395 1.392 0.317 C20 A1B7U 7 A1B7U C26 C8 C 0 1 Y N N N N N 35.742 17.999 10.268 1.111 -3.154 -0.273 C26 A1B7U 8 A1B7U C28 C9 C 0 1 Y N N N N N 33.846 16.638 10.897 -0.239 -4.977 0.503 C28 A1B7U 9 A1B7U C1 C10 C 0 1 N N N N N N 43.217 16.259 13.684 4.087 1.361 -3.203 C1 A1B7U 10 A1B7U N2 N1 N 0 1 N N N N N N 42.598 15.059 13.180 4.579 1.268 -1.827 N2 A1B7U 11 A1B7U C3 C11 C 0 1 Y N N N N N 41.406 15.046 12.493 3.695 1.387 -0.763 C3 A1B7U 12 A1B7U N7 N2 N 0 1 Y N N N N N 39.571 13.809 11.511 3.321 1.645 1.562 N7 A1B7U 13 A1B7U C9 C12 C 0 1 N N N N N N 41.326 12.442 12.380 5.624 1.582 0.798 C9 A1B7U 14 A1B7U O10 O1 O 0 1 N N N N N N 42.246 12.312 13.222 6.087 1.908 2.021 O10 A1B7U 15 A1B7U O11 O2 O 0 1 N N N N N N 40.801 11.500 11.718 6.404 1.321 -0.096 O11 A1B7U 16 A1B7U C12 C13 C 0 1 N N N N N N 38.886 17.467 10.964 -0.019 1.436 -0.074 C12 A1B7U 17 A1B7U N13 N3 N 0 1 N N N N N N 38.715 17.437 9.511 -0.493 0.053 0.020 N13 A1B7U 18 A1B7U C14 C14 C 0 1 N N N N N N 39.904 17.706 8.705 -1.620 -0.277 0.896 C14 A1B7U 19 A1B7U C16 C15 C 0 1 Y N N N N N 41.627 19.267 9.630 -3.617 -0.848 -0.501 C16 A1B7U 20 A1B7U C18 C16 C 0 1 Y N N N N N 41.553 21.642 9.307 -5.289 0.786 -1.020 C18 A1B7U 21 A1B7U C19 C17 C 0 1 Y N N N N N 40.392 21.491 8.578 -4.584 1.736 -0.302 C19 A1B7U 22 A1B7U CL21 CL1 CL 0 0 N N N N N N 38.379 20.034 7.460 -2.510 2.583 1.219 CL21 A1B7U 23 A1B7U CL22 CL2 CL 0 0 N N N N N N 39.643 22.903 7.924 -5.192 3.357 -0.177 CL22 A1B7U 24 A1B7U C23 C18 C 0 1 N N N N N N 37.595 17.069 8.853 0.106 -0.915 -0.701 C23 A1B7U 25 A1B7U O24 O3 O 0 1 N N N N N N 37.613 16.824 7.675 0.747 -0.627 -1.693 O24 A1B7U 26 A1B7U C25 C19 C 0 1 Y N N N N N 36.316 16.913 9.613 -0.014 -2.329 -0.283 C25 A1B7U 27 A1B7U C27 C20 C 0 1 Y N N N N N 34.522 17.822 10.883 0.993 -4.474 0.117 C27 A1B7U 28 A1B7U C29 C21 C 0 1 Y N N N N N 34.442 15.598 10.246 -1.360 -4.164 0.489 C29 A1B7U 29 A1B7U C30 C22 C 0 1 Y N N N N N 35.656 15.689 9.606 -1.253 -2.842 0.101 C30 A1B7U 30 A1B7U F31 F1 F 0 1 N N N N N N 33.780 14.417 10.209 -2.560 -4.664 0.856 F31 A1B7U 31 A1B7U F32 F2 F 0 1 N N N N N N 33.944 18.885 11.493 2.080 -5.276 0.123 F32 A1B7U 32 A1B7U H1 H1 H 0 1 N N N N N N 41.237 17.188 12.355 1.916 1.232 -1.975 H1 A1B7U 33 A1B7U H2 H2 H 0 1 N N N N N N 38.059 14.944 10.667 1.363 1.706 2.233 H2 A1B7U 34 A1B7U H3 H3 H 0 1 N N N N N N 43.076 20.630 10.411 -5.355 -1.246 -1.680 H3 A1B7U 35 A1B7U H4 H4 H 0 1 N N N N N N 36.241 18.957 10.293 2.072 -2.763 -0.574 H4 A1B7U 36 A1B7U H5 H5 H 0 1 N N N N N N 32.894 16.530 11.395 -0.327 -6.010 0.807 H5 A1B7U 37 A1B7U H6 H6 H 0 1 N N N N N N 44.157 16.001 14.193 3.354 0.573 -3.381 H6 A1B7U 38 A1B7U H7 H7 H 0 1 N N N N N N 43.428 16.942 12.848 3.619 2.333 -3.357 H7 A1B7U 39 A1B7U H8 H8 H 0 1 N N N N N N 42.538 16.751 14.396 4.920 1.245 -3.896 H8 A1B7U 40 A1B7U H9 H9 H 0 1 N N N N N N 42.461 14.469 13.975 5.524 1.124 -1.658 H9 A1B7U 41 A1B7U H10 H10 H 0 1 N N N N N N 42.489 11.396 13.287 7.047 1.921 2.138 H10 A1B7U 42 A1B7U H11 H11 H 0 1 N N N N N N 39.506 18.334 11.236 -0.495 2.037 0.701 H11 A1B7U 43 A1B7U H12 H12 H 0 1 N N N N N N 37.899 17.559 11.441 -0.272 1.842 -1.054 H12 A1B7U 44 A1B7U H13 H13 H 0 1 N N N N N N 39.642 17.578 7.644 -1.527 0.276 1.831 H13 A1B7U 45 A1B7U H14 H14 H 0 1 N N N N N N 40.683 16.980 8.981 -1.617 -1.347 1.104 H14 A1B7U 46 A1B7U H15 H15 H 0 1 N N N N N N 42.120 18.402 10.049 -3.239 -1.857 -0.579 H15 A1B7U 47 A1B7U H16 H16 H 0 1 N N N N N N 41.976 22.623 9.463 -6.217 1.053 -1.504 H16 A1B7U 48 A1B7U H17 H17 H 0 1 N N N N N N 36.086 14.831 9.110 -2.127 -2.208 0.095 H17 A1B7U 49 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B7U CL21 C20 SING N N 1 A1B7U O24 C23 DOUB N N 2 A1B7U CL22 C19 SING N N 3 A1B7U C20 C19 DOUB Y N 4 A1B7U C20 C15 SING Y N 5 A1B7U C19 C18 SING Y N 6 A1B7U C14 C15 SING N N 7 A1B7U C14 N13 SING N N 8 A1B7U C23 N13 SING N N 9 A1B7U C23 C25 SING N N 10 A1B7U C15 C16 DOUB Y N 11 A1B7U C18 C17 DOUB Y N 12 A1B7U N13 C12 SING N N 13 A1B7U C30 C25 DOUB Y N 14 A1B7U C30 C29 SING Y N 15 A1B7U C25 C26 SING Y N 16 A1B7U C16 C17 SING Y N 17 A1B7U F31 C29 SING N N 18 A1B7U C29 C28 DOUB Y N 19 A1B7U C26 C27 DOUB Y N 20 A1B7U C27 C28 SING Y N 21 A1B7U C27 F32 SING N N 22 A1B7U C12 C5 SING N N 23 A1B7U C6 C5 DOUB Y N 24 A1B7U C6 N7 SING Y N 25 A1B7U C5 C4 SING Y N 26 A1B7U N7 C8 DOUB Y N 27 A1B7U O11 C9 DOUB N N 28 A1B7U C4 C3 DOUB Y N 29 A1B7U C8 C9 SING N N 30 A1B7U C8 C3 SING Y N 31 A1B7U C9 O10 SING N N 32 A1B7U C3 N2 SING N N 33 A1B7U N2 C1 SING N N 34 A1B7U C4 H1 SING N N 35 A1B7U C6 H2 SING N N 36 A1B7U C17 H3 SING N N 37 A1B7U C26 H4 SING N N 38 A1B7U C28 H5 SING N N 39 A1B7U C1 H6 SING N N 40 A1B7U C1 H7 SING N N 41 A1B7U C1 H8 SING N N 42 A1B7U N2 H9 SING N N 43 A1B7U O10 H10 SING N N 44 A1B7U C12 H11 SING N N 45 A1B7U C12 H12 SING N N 46 A1B7U C14 H13 SING N N 47 A1B7U C14 H14 SING N N 48 A1B7U C16 H15 SING N N 49 A1B7U C18 H16 SING N N 50 A1B7U C30 H17 SING N N 51 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B7U SMILES ACDLabs 14.52 "OC(=O)c1ncc(cc1NC)CN(Cc1cccc(Cl)c1Cl)C(=O)c1cc(F)cc(F)c1" A1B7U InChI InChI 1.06 "InChI=1S/C22H17Cl2F2N3O3/c1-27-18-5-12(9-28-20(18)22(31)32)10-29(11-13-3-2-4-17(23)19(13)24)21(30)14-6-15(25)8-16(26)7-14/h2-9,27H,10-11H2,1H3,(H,31,32)" A1B7U InChIKey InChI 1.06 OLFOLTQPVNEEKT-UHFFFAOYSA-N A1B7U SMILES_CANONICAL CACTVS 3.385 "CNc1cc(CN(Cc2cccc(Cl)c2Cl)C(=O)c3cc(F)cc(F)c3)cnc1C(O)=O" A1B7U SMILES CACTVS 3.385 "CNc1cc(CN(Cc2cccc(Cl)c2Cl)C(=O)c3cc(F)cc(F)c3)cnc1C(O)=O" A1B7U SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CNc1cc(cnc1C(=O)O)CN(Cc2cccc(c2Cl)Cl)C(=O)c3cc(cc(c3)F)F" A1B7U SMILES "OpenEye OEToolkits" 3.1.0.0 "CNc1cc(cnc1C(=O)O)CN(Cc2cccc(c2Cl)Cl)C(=O)c3cc(cc(c3)F)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B7U "SYSTEMATIC NAME" ACDLabs 14.52 "5-({N-[(2,3-dichlorophenyl)methyl]-3,5-difluorobenzamido}methyl)-3-(methylamino)pyridine-2-carboxylic acid" A1B7U "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "5-[[[2,3-bis(chloranyl)phenyl]methyl-[3,5-bis(fluoranyl)phenyl]carbonyl-amino]methyl]-3-(methylamino)pyridine-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B7U "Create component" 2025-04-04 RCSB A1B7U "Initial release" 2025-05-21 RCSB #