data_A1B8R # _chem_comp.id A1B8R _chem_comp.name "N-(2,3-dihydro-1H-isoindol-5-yl)-2-(trifluoromethyl)-1H-1,3-benzimidazole-7-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H13 F3 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-04-11 _chem_comp.pdbx_modified_date 2025-04-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 346.307 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B8R _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7IAC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B8R N1 N1 N 0 1 N N N N N N -9.067 4.509 -13.308 -1.670 1.642 -0.104 N1 A1B8R 1 A1B8R N3 N2 N 0 1 Y N N N N N -6.497 5.670 -18.524 4.174 0.627 -0.068 N3 A1B8R 2 A1B8R C4 C1 C 0 1 Y N N N N N -9.019 5.775 -9.820 -5.153 0.998 0.880 C4 A1B8R 3 A1B8R C5 C2 C 0 1 Y N N N N N -9.213 4.585 -9.129 -5.333 -0.281 0.386 C5 A1B8R 4 A1B8R C6 C3 C 0 1 Y N N N N N -9.393 3.389 -9.809 -4.297 -0.924 -0.270 C6 A1B8R 5 A1B8R C7 C4 C 0 1 Y N N N N N -9.303 3.343 -11.192 -3.082 -0.290 -0.432 C7 A1B8R 6 A1B8R C8 C5 C 0 1 N N N N N N -9.621 2.278 -8.824 -4.781 -2.293 -0.693 C8 A1B8R 7 A1B8R C10 C6 C 0 1 Y N N N N N -8.494 5.143 -15.584 0.775 1.631 -0.125 C10 A1B8R 8 A1B8R C13 C7 C 0 1 Y N N N N N -8.909 4.930 -18.378 3.223 2.965 -0.267 C13 A1B8R 9 A1B8R C15 C8 C 0 1 Y N N N N N -5.624 5.962 -17.581 3.628 -0.549 0.043 C15 A1B8R 10 A1B8R C17 C9 C 0 1 Y N N N N N -7.460 5.440 -16.490 1.972 0.901 -0.072 C17 A1B8R 11 A1B8R O1 O1 O 0 1 N N N N N N -7.294 5.873 -13.690 -0.559 -0.275 0.057 O1 A1B8R 12 A1B8R C1 C10 C 0 1 N N N N N N -8.246 5.222 -14.110 -0.523 0.936 -0.052 C1 A1B8R 13 A1B8R C2 C11 C 0 1 Y N N N N N -9.129 4.544 -11.888 -2.898 0.995 0.064 C2 A1B8R 14 A1B8R C3 C12 C 0 1 Y N N N N N -8.926 5.739 -11.201 -3.941 1.640 0.716 C3 A1B8R 15 A1B8R N2 N3 N 0 1 N N N N N N -9.149 2.888 -7.576 -6.259 -2.232 -0.625 N2 A1B8R 16 A1B8R C9 C13 C 0 1 N N N N N N -9.346 4.344 -7.652 -6.526 -1.210 0.412 C9 A1B8R 17 A1B8R C11 C14 C 0 1 Y N N N N N -9.715 4.737 -16.118 0.823 3.019 -0.250 C11 A1B8R 18 A1B8R C12 C15 C 0 1 Y N N N N N -9.923 4.665 -17.492 2.040 3.672 -0.319 C12 A1B8R 19 A1B8R C14 C16 C 0 1 Y N N N N N -7.671 5.327 -17.866 3.202 1.573 -0.143 C14 A1B8R 20 A1B8R C16 C17 C 0 1 N N N N N N -4.214 6.333 -17.854 4.387 -1.847 0.152 C16 A1B8R 21 A1B8R F1 F1 F 0 1 N N N N N N -3.708 5.653 -18.876 5.726 -1.580 0.458 F1 A1B8R 22 A1B8R F2 F2 F 0 1 N N N N N N -3.431 6.093 -16.815 3.825 -2.632 1.164 F2 A1B8R 23 A1B8R F3 F3 F 0 1 N N N N N N -4.078 7.621 -18.147 4.315 -2.533 -1.065 F3 A1B8R 24 A1B8R N4 N4 N 0 1 Y N N N N N -6.152 5.811 -16.347 2.272 -0.435 0.045 N4 A1B8R 25 A1B8R H1 H1 H 0 1 N N N N N N -9.703 3.887 -13.765 -1.643 2.600 -0.254 H1 A1B8R 26 A1B8R H3 H3 H 0 1 N N N N N N -8.942 6.712 -9.289 -5.963 1.497 1.391 H3 A1B8R 27 A1B8R H4 H4 H 0 1 N N N N N N -9.366 2.403 -11.719 -2.274 -0.792 -0.944 H4 A1B8R 28 A1B8R H5 H5 H 0 1 N N N N N N -10.686 2.009 -8.762 -4.459 -2.508 -1.712 H5 A1B8R 29 A1B8R H6 H6 H 0 1 N N N N N N -9.032 1.386 -9.082 -4.404 -3.053 -0.010 H6 A1B8R 30 A1B8R H12 H7 H 0 1 N N N N N N -9.064 4.834 -19.443 4.166 3.487 -0.322 H12 A1B8R 31 A1B8R H2 H8 H 0 1 N N N N N N -8.695 6.641 -11.748 -3.805 2.642 1.094 H2 A1B8R 32 A1B8R H7 H9 H 0 1 N N N N N N -9.668 2.519 -6.805 -6.650 -1.957 -1.513 H7 A1B8R 33 A1B8R H8 H11 H 0 1 N N N N N N -10.341 4.635 -7.285 -6.615 -1.681 1.391 H8 A1B8R 34 A1B8R H9 H12 H 0 1 N N N N N N -8.574 4.885 -7.085 -7.436 -0.660 0.173 H9 A1B8R 35 A1B8R H10 H13 H 0 1 N N N N N N -10.520 4.472 -15.449 -0.095 3.587 -0.292 H10 A1B8R 36 A1B8R H11 H14 H 0 1 N N N N N N -10.899 4.396 -17.868 2.065 4.747 -0.414 H11 A1B8R 37 A1B8R H13 H15 H 0 1 N N N N N N -5.671 5.947 -15.481 1.635 -1.163 0.116 H13 A1B8R 38 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B8R O1 C1 DOUB N N 1 A1B8R C1 N1 SING N N 2 A1B8R N1 C2 SING N N 3 A1B8R C2 C3 DOUB Y N 4 A1B8R C3 C4 SING Y N 5 A1B8R C4 C5 DOUB Y N 6 A1B8R C5 C6 SING Y N 7 A1B8R C6 C7 DOUB Y N 8 A1B8R C6 C8 SING N N 9 A1B8R C8 N2 SING N N 10 A1B8R N2 C9 SING N N 11 A1B8R C1 C10 SING N N 12 A1B8R C10 C11 DOUB Y N 13 A1B8R C11 C12 SING Y N 14 A1B8R C12 C13 DOUB Y N 15 A1B8R C13 C14 SING Y N 16 A1B8R C14 N3 SING Y N 17 A1B8R N3 C15 DOUB Y N 18 A1B8R C15 C16 SING N N 19 A1B8R C16 F1 SING N N 20 A1B8R C16 F2 SING N N 21 A1B8R C16 F3 SING N N 22 A1B8R C15 N4 SING Y N 23 A1B8R N4 C17 SING Y N 24 A1B8R C2 C7 SING Y N 25 A1B8R C10 C17 SING Y N 26 A1B8R C5 C9 SING N N 27 A1B8R C14 C17 DOUB Y N 28 A1B8R N1 H1 SING N N 29 A1B8R C4 H3 SING N N 30 A1B8R C7 H4 SING N N 31 A1B8R C8 H5 SING N N 32 A1B8R C8 H6 SING N N 33 A1B8R C13 H12 SING N N 34 A1B8R C3 H2 SING N N 35 A1B8R N2 H7 SING N N 36 A1B8R C9 H8 SING N N 37 A1B8R C9 H9 SING N N 38 A1B8R C11 H10 SING N N 39 A1B8R C12 H11 SING N N 40 A1B8R N4 H13 SING N N 41 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B8R SMILES ACDLabs 14.52 "FC(F)(F)c1nc2cccc(c2[NH]1)C(=O)Nc1ccc2CNCc2c1" A1B8R InChI InChI 1.06 "InChI=1S/C17H13F3N4O/c18-17(19,20)16-23-13-3-1-2-12(14(13)24-16)15(25)22-11-5-4-9-7-21-8-10(9)6-11/h1-6,21H,7-8H2,(H,22,25)(H,23,24)" A1B8R InChIKey InChI 1.06 MCVXKGRMYLXFIV-UHFFFAOYSA-N A1B8R SMILES_CANONICAL CACTVS 3.385 "FC(F)(F)c1[nH]c2c(cccc2C(=O)Nc3ccc4CNCc4c3)n1" A1B8R SMILES CACTVS 3.385 "FC(F)(F)c1[nH]c2c(cccc2C(=O)Nc3ccc4CNCc4c3)n1" A1B8R SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(c2c(c1)nc([nH]2)C(F)(F)F)C(=O)Nc3ccc4c(c3)CNC4" A1B8R SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(c2c(c1)nc([nH]2)C(F)(F)F)C(=O)Nc3ccc4c(c3)CNC4" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B8R "SYSTEMATIC NAME" ACDLabs 14.52 "N-(2,3-dihydro-1H-isoindol-5-yl)-2-(trifluoromethyl)-1H-1,3-benzimidazole-7-carboxamide" A1B8R "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "~{N}-(2,3-dihydro-1~{H}-isoindol-5-yl)-2-(trifluoromethyl)-3~{H}-benzimidazole-4-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B8R "Create component" 2025-04-11 RCSB A1B8R "Initial release" 2025-04-23 RCSB #