data_A1B9E # _chem_comp.id A1B9E _chem_comp.name "(2R)-2-(3-chloro-5-cyclopropylphenyl)-N-(2,2-difluoroethyl)-2-[(2,3-dihydro-1H-isoindol-5-yl)amino]acetamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H22 Cl F2 N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-04-11 _chem_comp.pdbx_modified_date 2025-04-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 405.869 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B9E _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I9U _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B9E N1 N1 N 0 1 N N N N N N -6.309 2.443 -12.773 -0.850 2.229 -0.446 N1 A1B9E 1 A1B9E N3 N2 N 0 1 N N N N N N -9.040 2.496 -7.215 7.351 -0.705 0.028 N3 A1B9E 2 A1B9E C4 C1 C 0 1 N N R N N N -7.798 4.118 -13.723 0.238 0.104 0.202 C4 A1B9E 3 A1B9E C5 C2 C 0 1 Y N N N N N -8.806 4.372 -11.458 2.647 -0.471 0.101 C5 A1B9E 4 A1B9E C6 C3 C 0 1 Y N N N N N -8.492 5.516 -10.712 2.921 0.602 0.940 C6 A1B9E 5 A1B9E C7 C4 C 0 1 Y N N N N N -8.485 5.460 -9.328 4.222 0.869 1.315 C7 A1B9E 6 A1B9E C8 C5 C 0 1 Y N N N N N -8.794 4.259 -8.698 5.254 0.069 0.859 C8 A1B9E 7 A1B9E C10 C6 C 0 1 Y N N N N N -9.183 3.185 -10.822 3.685 -1.273 -0.356 C10 A1B9E 8 A1B9E C13 C7 C 0 1 Y N N N N N -8.027 4.441 -15.196 -1.047 -0.682 0.194 C13 A1B9E 9 A1B9E C15 C8 C 0 1 Y N N N N N -9.192 4.311 -17.297 -2.509 -2.259 -0.862 C15 A1B9E 10 A1B9E C17 C9 C 0 1 Y N N N N N -7.065 5.403 -17.202 -3.128 -1.265 1.227 C17 A1B9E 11 A1B9E C20 C10 C 0 1 N N N N N N -4.682 6.466 -17.100 -5.515 -0.615 2.017 C20 A1B9E 12 A1B9E C21 C11 C 0 1 Y N N N N N -6.990 5.078 -15.857 -1.949 -0.544 1.233 C21 A1B9E 13 A1B9E O1 O1 O 0 1 N N N N N N -7.985 1.738 -14.092 0.839 1.439 -1.649 O1 A1B9E 14 A1B9E C1 C12 C 0 1 N N N N N N -7.359 2.649 -13.569 0.098 1.305 -0.698 C1 A1B9E 15 A1B9E C2 C13 C 0 1 N N N N N N -5.077 3.213 -12.834 -0.990 3.393 -1.325 C2 A1B9E 16 A1B9E C3 C14 C 0 1 N N N N N N -4.360 3.054 -14.154 -2.135 4.275 -0.824 C3 A1B9E 17 A1B9E F1 F1 F 0 1 N N N N N N -4.673 1.886 -14.772 -3.326 3.541 -0.829 F1 A1B9E 18 A1B9E F2 F2 F 0 1 N N N N N N -3.017 3.016 -13.965 -1.858 4.704 0.479 F2 A1B9E 19 A1B9E N2 N3 N 0 1 N N N N N N -8.889 4.461 -12.840 1.332 -0.743 -0.281 N2 A1B9E 20 A1B9E C9 C15 C 0 1 Y N N N N N -9.164 3.141 -9.436 4.984 -1.002 0.024 C9 A1B9E 21 A1B9E C11 C16 C 0 1 N N N N N N -9.529 2.013 -8.514 6.292 -1.684 -0.308 C11 A1B9E 22 A1B9E C12 C17 C 0 1 N N N N N N -8.941 3.965 -7.232 6.746 0.119 1.099 C12 A1B9E 23 A1B9E C14 C18 C 0 1 Y N N N N N -9.146 4.062 -15.935 -1.328 -1.537 -0.855 C14 A1B9E 24 A1B9E CL1 CL1 CL 0 0 N N N N N N -10.572 3.831 -18.259 -2.862 -3.334 -2.178 CL1 A1B9E 25 A1B9E C16 C19 C 0 1 Y N N N N N -8.163 4.968 -17.927 -3.407 -2.124 0.181 C16 A1B9E 26 A1B9E C18 C20 C 0 1 N N N N N N -5.907 6.070 -17.858 -4.109 -1.113 2.361 C18 A1B9E 27 A1B9E C19 C21 C 0 1 N N N N N N -4.612 5.359 -18.065 -5.295 -2.080 2.402 C19 A1B9E 28 A1B9E H1 H1 H 0 1 N N N N N N -6.373 1.714 -12.092 -1.442 2.121 0.314 H1 A1B9E 29 A1B9E H2 H2 H 0 1 N N N N N N -9.676 2.215 -6.496 8.183 -1.171 0.356 H2 A1B9E 30 A1B9E H4 H4 H 0 1 N N N N N N -6.933 4.723 -13.412 0.456 0.435 1.217 H4 A1B9E 31 A1B9E H5 H5 H 0 1 N N N N N N -8.255 6.441 -11.216 2.116 1.228 1.297 H5 A1B9E 32 A1B9E H6 H6 H 0 1 N N N N N N -8.243 6.337 -8.746 4.435 1.704 1.967 H6 A1B9E 33 A1B9E H7 H7 H 0 1 N N N N N N -9.482 2.322 -11.398 3.475 -2.108 -1.008 H7 A1B9E 34 A1B9E H8 H8 H 0 1 N N N N N N -4.613 6.259 -16.022 -6.013 0.027 2.743 H8 A1B9E 35 A1B9E H9 H9 H 0 1 N N N N N N -4.183 7.421 -17.323 -5.729 -0.397 0.971 H9 A1B9E 36 A1B9E H10 H10 H 0 1 N N N N N N -6.095 5.329 -15.307 -1.731 0.128 2.050 H10 A1B9E 37 A1B9E H11 H11 H 0 1 N N N N N N -4.410 2.875 -12.027 -0.062 3.965 -1.320 H11 A1B9E 38 A1B9E H12 H12 H 0 1 N N N N N N -5.318 4.276 -12.689 -1.206 3.059 -2.339 H12 A1B9E 39 A1B9E H13 H13 H 0 1 N N N N N N -4.630 3.907 -14.794 -2.240 5.141 -1.477 H13 A1B9E 40 A1B9E H14 H14 H 0 1 N N N N N N -9.115 5.414 -13.040 1.142 -1.493 -0.866 H14 A1B9E 41 A1B9E H15 H15 H 0 1 N N N N N N -10.617 1.851 -8.494 6.330 -1.930 -1.369 H15 A1B9E 42 A1B9E H16 H16 H 0 1 N N N N N N -9.025 1.080 -8.807 6.410 -2.586 0.292 H16 A1B9E 43 A1B9E H17 H17 H 0 1 N N N N N N -8.064 4.312 -6.666 6.984 -0.301 2.076 H17 A1B9E 44 A1B9E H18 H18 H 0 1 N N N N N N -9.849 4.430 -6.822 7.104 1.146 1.031 H18 A1B9E 45 A1B9E H19 H19 H 0 1 N N N N N N -9.977 3.575 -15.446 -0.626 -1.642 -1.669 H19 A1B9E 46 A1B9E H20 H20 H 0 1 N N N N N N -8.210 5.146 -18.991 -4.329 -2.687 0.176 H20 A1B9E 47 A1B9E H21 H21 H 0 1 N N N N N N -6.180 6.760 -18.670 -3.683 -0.798 3.313 H21 A1B9E 48 A1B9E H22 H22 H 0 1 N N N N N N -4.490 4.326 -17.707 -5.649 -2.401 3.382 H22 A1B9E 49 A1B9E H23 H23 H 0 1 N N N N N N -4.060 5.488 -19.008 -5.365 -2.825 1.610 H23 A1B9E 50 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B9E CL1 C15 SING N N 1 A1B9E C19 C18 SING N N 2 A1B9E C19 C20 SING N N 3 A1B9E C16 C15 DOUB Y N 4 A1B9E C16 C17 SING Y N 5 A1B9E C18 C17 SING N N 6 A1B9E C18 C20 SING N N 7 A1B9E C15 C14 SING Y N 8 A1B9E C17 C21 DOUB Y N 9 A1B9E C14 C13 DOUB Y N 10 A1B9E C21 C13 SING Y N 11 A1B9E C13 C4 SING N N 12 A1B9E F1 C3 SING N N 13 A1B9E C3 F2 SING N N 14 A1B9E C3 C2 SING N N 15 A1B9E O1 C1 DOUB N N 16 A1B9E C4 C1 SING N N 17 A1B9E C4 N2 SING N N 18 A1B9E C1 N1 SING N N 19 A1B9E N2 C5 SING N N 20 A1B9E C2 N1 SING N N 21 A1B9E C5 C10 DOUB Y N 22 A1B9E C5 C6 SING Y N 23 A1B9E C10 C9 SING Y N 24 A1B9E C6 C7 DOUB Y N 25 A1B9E C9 C8 DOUB Y N 26 A1B9E C9 C11 SING N N 27 A1B9E C7 C8 SING Y N 28 A1B9E C8 C12 SING N N 29 A1B9E C11 N3 SING N N 30 A1B9E C12 N3 SING N N 31 A1B9E N1 H1 SING N N 32 A1B9E N3 H2 SING N N 33 A1B9E C4 H4 SING N N 34 A1B9E C6 H5 SING N N 35 A1B9E C7 H6 SING N N 36 A1B9E C10 H7 SING N N 37 A1B9E C20 H8 SING N N 38 A1B9E C20 H9 SING N N 39 A1B9E C21 H10 SING N N 40 A1B9E C2 H11 SING N N 41 A1B9E C2 H12 SING N N 42 A1B9E C3 H13 SING N N 43 A1B9E N2 H14 SING N N 44 A1B9E C11 H15 SING N N 45 A1B9E C11 H16 SING N N 46 A1B9E C12 H17 SING N N 47 A1B9E C12 H18 SING N N 48 A1B9E C14 H19 SING N N 49 A1B9E C16 H20 SING N N 50 A1B9E C18 H21 SING N N 51 A1B9E C19 H22 SING N N 52 A1B9E C19 H23 SING N N 53 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B9E SMILES ACDLabs 14.52 "FC(F)CNC(=O)C(Nc1ccc2CNCc2c1)c1cc(cc(Cl)c1)C1CC1" A1B9E InChI InChI 1.06 "InChI=1S/C21H22ClF2N3O/c22-17-6-14(12-1-2-12)5-15(7-17)20(21(28)26-11-19(23)24)27-18-4-3-13-9-25-10-16(13)8-18/h3-8,12,19-20,25,27H,1-2,9-11H2,(H,26,28)/t20-/m1/s1" A1B9E InChIKey InChI 1.06 ZBDKUHJVDDPOHR-HXUWFJFHSA-N A1B9E SMILES_CANONICAL CACTVS 3.385 "FC(F)CNC(=O)[C@H](Nc1ccc2CNCc2c1)c3cc(Cl)cc(c3)C4CC4" A1B9E SMILES CACTVS 3.385 "FC(F)CNC(=O)[CH](Nc1ccc2CNCc2c1)c3cc(Cl)cc(c3)C4CC4" A1B9E SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc2c(cc1N[C@H](c3cc(cc(c3)Cl)C4CC4)C(=O)NCC(F)F)CNC2" A1B9E SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc2c(cc1NC(c3cc(cc(c3)Cl)C4CC4)C(=O)NCC(F)F)CNC2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B9E "SYSTEMATIC NAME" ACDLabs 14.52 "(2R)-2-(3-chloro-5-cyclopropylphenyl)-N-(2,2-difluoroethyl)-2-[(2,3-dihydro-1H-isoindol-5-yl)amino]acetamide" A1B9E "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(2~{R})-~{N}-[2,2-bis(fluoranyl)ethyl]-2-(3-chloranyl-5-cyclopropyl-phenyl)-2-(2,3-dihydro-1~{H}-isoindol-5-ylamino)ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B9E "Create component" 2025-04-11 RCSB A1B9E "Initial release" 2025-04-23 RCSB #