data_A1B9L # _chem_comp.id A1B9L _chem_comp.name "(2R)-(6-chloro-1H-indazol-4-yl)[(2,3-dihydro-1H-isoindol-5-yl)amino]acetonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H14 Cl N5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-04-11 _chem_comp.pdbx_modified_date 2025-04-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 323.780 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1B9L _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7I9Q _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1B9L N1 N1 N 0 1 N N N N N N -9.964 7.512 -13.602 -0.336 -1.532 3.022 N1 A1B9L 1 A1B9L N3 N2 N 0 1 N N N N N N -9.266 2.339 -7.441 6.507 0.794 -0.966 N3 A1B9L 2 A1B9L C4 C1 C 0 1 Y N N N N N -8.482 5.475 -10.736 2.419 -1.274 0.121 C4 A1B9L 3 A1B9L C5 C2 C 0 1 Y N N N N N -8.684 5.385 -9.372 3.754 -1.564 -0.082 C5 A1B9L 4 A1B9L C6 C3 C 0 1 Y N N N N N -9.044 4.159 -8.824 4.671 -0.541 -0.235 C6 A1B9L 5 A1B9L C7 C4 C 0 1 Y N N N N N -9.250 3.047 -9.632 4.254 0.778 -0.184 C7 A1B9L 6 A1B9L C8 C5 C 0 1 Y N N N N N -9.044 3.119 -11.004 2.921 1.075 0.019 C8 A1B9L 7 A1B9L C10 C6 C 0 1 N N N N N N -9.350 3.805 -7.397 6.166 -0.557 -0.465 C10 A1B9L 8 A1B9L C13 C7 C 0 1 Y N N N N N -9.422 4.381 -17.631 -3.266 1.553 -0.054 C13 A1B9L 9 A1B9L C15 C8 C 0 1 Y N N N N N -7.158 4.898 -17.247 -3.938 -0.661 -0.672 C15 A1B9L 10 A1B9L C17 C9 C 0 1 Y N N N N N -7.404 5.042 -15.862 -2.658 -1.133 -0.324 C17 A1B9L 11 A1B9L C1 C10 C 0 1 N N N N N N -9.587 6.428 -13.720 -0.331 -1.186 1.940 C1 A1B9L 12 A1B9L C2 C11 C 0 1 N N R N N N -9.190 5.005 -13.932 -0.324 -0.737 0.538 C2 A1B9L 13 A1B9L N2 N3 N 0 1 N N N N N N -8.329 4.450 -12.906 0.648 0.346 0.377 N2 A1B9L 14 A1B9L C3 C12 C 0 1 Y N N N N N -8.687 4.358 -11.556 1.998 0.049 0.172 C3 A1B9L 15 A1B9L C9 C13 C 0 1 N N N N N N -9.679 1.889 -8.778 5.463 1.665 -0.380 C9 A1B9L 16 A1B9L C11 C14 C 0 1 Y N N N N N -8.711 4.809 -15.360 -1.697 -0.241 0.163 C11 A1B9L 17 A1B9L C12 C15 C 0 1 Y N N N N N -9.693 4.502 -16.278 -2.003 1.083 0.289 C12 A1B9L 18 A1B9L CL1 CL1 CL 0 0 N N N N N N -10.772 3.960 -18.636 -3.629 3.243 0.114 CL1 A1B9L 19 A1B9L C14 C16 C 0 1 Y N N N N N -8.155 4.543 -18.158 -4.230 0.693 -0.531 C14 A1B9L 20 A1B9L N4 N4 N 0 1 Y N N N N N -5.833 5.102 -17.438 -4.653 -1.745 -1.111 N4 A1B9L 21 A1B9L N5 N5 N 0 1 Y N N N N N -5.203 5.359 -16.257 -3.843 -2.884 -1.043 N5 A1B9L 22 A1B9L C16 C17 C 0 1 Y N N N N N -6.129 5.330 -15.312 -2.667 -2.570 -0.581 C16 A1B9L 23 A1B9L H1 H1 H 0 1 N N N N N N -9.872 1.945 -6.750 6.478 0.823 -1.974 H1 A1B9L 24 A1B9L H3 H3 H 0 1 N N N N N N -8.165 6.411 -11.172 1.704 -2.074 0.240 H3 A1B9L 25 A1B9L H4 H4 H 0 1 N N N N N N -8.564 6.254 -8.741 4.082 -2.593 -0.122 H4 A1B9L 26 A1B9L H5 H5 H 0 1 N N N N N N -9.156 2.245 -11.628 2.597 2.104 0.058 H5 A1B9L 27 A1B9L H6 H6 H 0 1 N N N N N N -8.606 4.231 -6.708 6.424 -1.311 -1.209 H6 A1B9L 28 A1B9L H7 H7 H 0 1 N N N N N N -10.355 4.142 -7.105 6.689 -0.755 0.470 H7 A1B9L 29 A1B9L H8 H8 H 0 1 N N N N N N -10.128 4.434 -13.869 -0.050 -1.571 -0.109 H8 A1B9L 30 A1B9L H9 H9 H 0 1 N N N N N N -8.126 3.515 -13.198 0.355 1.270 0.412 H9 A1B9L 31 A1B9L H10 H10 H 0 1 N N N N N N -10.767 1.733 -8.831 5.799 2.061 0.578 H10 A1B9L 32 A1B9L H11 H11 H 0 1 N N N N N N -9.161 0.963 -9.068 5.226 2.480 -1.063 H11 A1B9L 33 A1B9L H12 H12 H 0 1 N N N N N N -10.705 4.351 -15.931 -1.257 1.772 0.657 H12 A1B9L 34 A1B9L H13 H13 H 0 1 N N N N N N -7.949 4.404 -19.209 -5.208 1.067 -0.795 H13 A1B9L 35 A1B9L H14 H14 H 0 1 N N N N N N -5.377 5.069 -18.327 -5.572 -1.726 -1.419 H14 A1B9L 36 A1B9L H15 H15 H 0 1 N N N N N N -5.939 5.502 -14.263 -1.843 -3.250 -0.424 H15 A1B9L 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1B9L CL1 C13 SING N N 1 A1B9L C14 C13 DOUB Y N 2 A1B9L C14 C15 SING Y N 3 A1B9L C13 C12 SING Y N 4 A1B9L N4 C15 SING Y N 5 A1B9L N4 N5 SING Y N 6 A1B9L C15 C17 DOUB Y N 7 A1B9L C12 C11 DOUB Y N 8 A1B9L N5 C16 DOUB Y N 9 A1B9L C17 C11 SING Y N 10 A1B9L C17 C16 SING Y N 11 A1B9L C11 C2 SING N N 12 A1B9L C2 C1 SING N N 13 A1B9L C2 N2 SING N N 14 A1B9L C1 N1 TRIP N N 15 A1B9L N2 C3 SING N N 16 A1B9L C3 C8 DOUB Y N 17 A1B9L C3 C4 SING Y N 18 A1B9L C8 C7 SING Y N 19 A1B9L C4 C5 DOUB Y N 20 A1B9L C7 C6 DOUB Y N 21 A1B9L C7 C9 SING N N 22 A1B9L C5 C6 SING Y N 23 A1B9L C6 C10 SING N N 24 A1B9L C9 N3 SING N N 25 A1B9L N3 C10 SING N N 26 A1B9L N3 H1 SING N N 27 A1B9L C4 H3 SING N N 28 A1B9L C5 H4 SING N N 29 A1B9L C8 H5 SING N N 30 A1B9L C10 H6 SING N N 31 A1B9L C10 H7 SING N N 32 A1B9L C2 H8 SING N N 33 A1B9L N2 H9 SING N N 34 A1B9L C9 H10 SING N N 35 A1B9L C9 H11 SING N N 36 A1B9L C12 H12 SING N N 37 A1B9L C14 H13 SING N N 38 A1B9L N4 H14 SING N N 39 A1B9L C16 H15 SING N N 40 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1B9L SMILES ACDLabs 14.52 "N#CC(Nc1cc2CNCc2cc1)c1cc(Cl)cc2[NH]ncc12" A1B9L InChI InChI 1.06 "InChI=1S/C17H14ClN5/c18-12-4-14(15-9-21-23-16(15)5-12)17(6-19)22-13-2-1-10-7-20-8-11(10)3-13/h1-5,9,17,20,22H,7-8H2,(H,21,23)/t17-/m0/s1" A1B9L InChIKey InChI 1.06 JYHIVSRGFWRCHH-KRWDZBQOSA-N A1B9L SMILES_CANONICAL CACTVS 3.385 "Clc1cc2[nH]ncc2c(c1)[C@@H](Nc3ccc4CNCc4c3)C#N" A1B9L SMILES CACTVS 3.385 "Clc1cc2[nH]ncc2c(c1)[CH](Nc3ccc4CNCc4c3)C#N" A1B9L SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc2c(cc1N[C@@H](C#N)c3cc(cc4c3cn[nH]4)Cl)CNC2" A1B9L SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc2c(cc1NC(C#N)c3cc(cc4c3cn[nH]4)Cl)CNC2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1B9L "SYSTEMATIC NAME" ACDLabs 14.52 "(2R)-(6-chloro-1H-indazol-4-yl)[(2,3-dihydro-1H-isoindol-5-yl)amino]acetonitrile" A1B9L "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(2~{R})-2-(6-chloranyl-1~{H}-indazol-4-yl)-2-(2,3-dihydro-1~{H}-isoindol-5-ylamino)ethanenitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1B9L "Create component" 2025-04-11 RCSB A1B9L "Initial release" 2025-04-23 RCSB #