data_A1BAR # _chem_comp.id A1BAR _chem_comp.name "[(2R,5S)-5-methyl-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-2-yl]methanol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H18 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-25 _chem_comp.pdbx_modified_date 2025-06-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 246.308 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BAR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HF7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BAR N2 N1 N 0 1 Y N N N N N 13.791 -0.298 4.817 -0.658 -1.038 -1.500 N2 A1BAR 1 A1BAR C3 C1 C 0 1 N N N N N N 13.761 -1.425 -0.172 3.687 0.084 -0.053 C3 A1BAR 2 A1BAR C6 C2 C 0 1 N N N N N N 11.291 -0.329 2.077 0.565 2.026 -1.194 C6 A1BAR 3 A1BAR C9 C3 C 0 1 Y N N N N N 14.977 2.022 5.434 -2.863 -0.470 -0.029 C9 A1BAR 4 A1BAR C12 C4 C 0 1 Y N N N N N 15.731 3.839 4.346 -3.128 0.558 1.947 C12 A1BAR 5 A1BAR C1 C5 C 0 1 N N N N N N 16.181 -1.293 0.646 3.814 -2.080 1.193 C1 A1BAR 6 A1BAR C10 C6 C 0 1 Y N N N N N 14.734 1.779 4.038 -1.589 -0.096 0.438 C10 A1BAR 7 A1BAR C11 C7 C 0 1 Y N N N N N 15.236 2.987 3.360 -1.804 0.568 1.722 C11 A1BAR 8 A1BAR C13 C8 C 0 1 N N N N N N 14.561 0.552 1.293 1.615 -1.253 0.339 C13 A1BAR 9 A1BAR C2 C9 C 0 1 N N S N N N 14.929 -0.471 0.190 2.962 -0.835 0.933 C2 A1BAR 10 A1BAR C4 C10 C 0 1 N N N N N N 12.958 -1.989 1.032 2.802 1.297 -0.353 C4 A1BAR 11 A1BAR C5 C11 C 0 1 N N R N N N 12.721 -1.025 2.241 1.460 0.818 -0.911 C5 A1BAR 12 A1BAR C7 C12 C 0 1 Y N N N N N 14.085 0.512 3.771 -0.467 -0.404 -0.346 C7 A1BAR 13 A1BAR C8 C13 C 0 1 Y N N N N N 14.081 0.074 6.104 -1.872 -1.371 -1.900 C8 A1BAR 14 A1BAR N1 N2 N 0 1 N N N N N N 13.757 0.057 2.450 0.806 -0.058 0.070 N1 A1BAR 15 A1BAR N3 N3 N 0 1 Y N N N N N 14.667 1.209 6.458 -2.951 -1.103 -1.198 N3 A1BAR 16 A1BAR N4 N4 N 0 1 Y N N N N N 15.566 3.232 5.546 -3.772 -0.060 0.906 N4 A1BAR 17 A1BAR O1 O1 O 0 1 N N N N N N 11.085 0.692 3.024 0.426 2.804 -0.003 O1 A1BAR 18 A1BAR H7 H1 H 0 1 N N N N N N 13.061 -0.874 -0.817 4.628 0.419 0.384 H7 A1BAR 19 A1BAR H6 H2 H 0 1 N N N N N N 14.180 -2.277 -0.728 3.887 -0.459 -0.977 H6 A1BAR 20 A1BAR H11 H3 H 0 1 N N N N N N 11.221 0.104 1.068 1.015 2.636 -1.976 H11 A1BAR 21 A1BAR H10 H4 H 0 1 N N N N N N 10.509 -1.092 2.203 -0.417 1.682 -1.520 H10 A1BAR 22 A1BAR H15 H5 H 0 1 N N N N N N 16.169 4.812 4.182 -3.614 0.975 2.817 H15 A1BAR 23 A1BAR H4 H6 H 0 1 N N N N N N 17.000 -0.604 0.899 4.774 -1.781 1.613 H4 A1BAR 24 A1BAR H5 H7 H 0 1 N N N N N N 15.922 -1.895 1.529 3.297 -2.734 1.895 H5 A1BAR 25 A1BAR H3 H8 H 0 1 N N N N N N 16.500 -1.958 -0.170 3.977 -2.610 0.255 H3 A1BAR 26 A1BAR H14 H9 H 0 1 N N N N N N 15.223 3.177 2.297 -1.045 0.987 2.366 H14 A1BAR 27 A1BAR H17 H10 H 0 1 N N N N N N 15.502 0.957 1.694 1.782 -1.795 -0.592 H17 A1BAR 28 A1BAR H18 H11 H 0 1 N N N N N N 13.988 1.360 0.815 1.090 -1.896 1.045 H18 A1BAR 29 A1BAR H1 H12 H 0 1 N N N N N N 15.205 0.089 -0.716 2.798 -0.305 1.871 H1 A1BAR 30 A1BAR H9 H13 H 0 1 N N N N N N 11.972 -2.300 0.657 2.635 1.861 0.564 H9 A1BAR 31 A1BAR H8 H14 H 0 1 N N N N N N 13.500 -2.868 1.410 3.295 1.934 -1.088 H8 A1BAR 32 A1BAR H2 H15 H 0 1 N N N N N N 12.679 -1.640 3.152 1.627 0.265 -1.836 H2 A1BAR 33 A1BAR H13 H16 H 0 1 N N N N N N 13.810 -0.613 6.893 -1.982 -1.885 -2.844 H13 A1BAR 34 A1BAR H16 H17 H 0 1 N N N N N N 15.849 3.635 6.417 -4.732 -0.188 0.843 H16 A1BAR 35 A1BAR H12 H18 H 0 1 N N N N N N 10.227 1.078 2.892 -0.131 3.588 -0.109 H12 A1BAR 36 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BAR C3 C2 SING N N 1 A1BAR C3 C4 SING N N 2 A1BAR C2 C1 SING N N 3 A1BAR C2 C13 SING N N 4 A1BAR C4 C5 SING N N 5 A1BAR C13 N1 SING N N 6 A1BAR C6 C5 SING N N 7 A1BAR C6 O1 SING N N 8 A1BAR C5 N1 SING N N 9 A1BAR N1 C7 SING N N 10 A1BAR C11 C10 SING Y N 11 A1BAR C11 C12 DOUB Y N 12 A1BAR C7 C10 DOUB Y N 13 A1BAR C7 N2 SING Y N 14 A1BAR C10 C9 SING Y N 15 A1BAR C12 N4 SING Y N 16 A1BAR N2 C8 DOUB Y N 17 A1BAR C9 N4 SING Y N 18 A1BAR C9 N3 DOUB Y N 19 A1BAR C8 N3 SING Y N 20 A1BAR C3 H7 SING N N 21 A1BAR C3 H6 SING N N 22 A1BAR C6 H11 SING N N 23 A1BAR C6 H10 SING N N 24 A1BAR C12 H15 SING N N 25 A1BAR C1 H4 SING N N 26 A1BAR C1 H5 SING N N 27 A1BAR C1 H3 SING N N 28 A1BAR C11 H14 SING N N 29 A1BAR C13 H17 SING N N 30 A1BAR C13 H18 SING N N 31 A1BAR C2 H1 SING N N 32 A1BAR C4 H9 SING N N 33 A1BAR C4 H8 SING N N 34 A1BAR C5 H2 SING N N 35 A1BAR C8 H13 SING N N 36 A1BAR N4 H16 SING N N 37 A1BAR O1 H12 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BAR SMILES ACDLabs 14.52 "OCC1CCC(C)CN1c1ncnc2[NH]ccc12" A1BAR InChI InChI 1.06 "InChI=1S/C13H18N4O/c1-9-2-3-10(7-18)17(6-9)13-11-4-5-14-12(11)15-8-16-13/h4-5,8-10,18H,2-3,6-7H2,1H3,(H,14,15,16)/t9-,10+/m0/s1" A1BAR InChIKey InChI 1.06 MPSGULNPLFLYFB-VHSXEESVSA-N A1BAR SMILES_CANONICAL CACTVS 3.385 "C[C@H]1CC[C@H](CO)N(C1)c2ncnc3[nH]ccc23" A1BAR SMILES CACTVS 3.385 "C[CH]1CC[CH](CO)N(C1)c2ncnc3[nH]ccc23" A1BAR SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "C[C@H]1CC[C@@H](N(C1)c2c3cc[nH]c3ncn2)CO" A1BAR SMILES "OpenEye OEToolkits" 3.1.0.0 "CC1CCC(N(C1)c2c3cc[nH]c3ncn2)CO" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BAR "SYSTEMATIC NAME" ACDLabs 14.52 "[(2R,5S)-5-methyl-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-2-yl]methanol" A1BAR "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "[(2~{R},5~{S})-5-methyl-1-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-2-yl]methanol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BAR "Create component" 2024-09-25 RCSB A1BAR "Initial release" 2025-06-11 RCSB #