data_A1BBE # _chem_comp.id A1BBE _chem_comp.name "{(3R,4R)-1-[(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-4-hydroxypyrrolidin-3-yl}methyl dihydrogen phosphate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H18 N5 O5 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-29 _chem_comp.pdbx_modified_date 2025-01-31 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 343.276 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BBE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9DA4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BBE C2 C1 C 0 1 Y N N N N N -16.512 39.075 -6.381 4.722 1.974 -1.275 C2 A1BBE 1 A1BBE C4 C2 C 0 1 Y N N N N N -16.773 36.790 -6.176 3.594 0.639 0.221 C4 A1BBE 2 A1BBE C5 C3 C 0 1 Y N N N N N -16.046 36.602 -7.340 4.772 -0.098 0.438 C5 A1BBE 3 A1BBE C01 C4 C 0 1 N N R N N N -15.284 34.443 -2.085 -1.003 -1.873 -0.714 C01 A1BBE 4 A1BBE C02 C5 C 0 1 N N R N N N -15.876 35.443 -1.502 -1.823 -0.568 -0.766 C02 A1BBE 5 A1BBE C03 C6 C 0 1 N N N N N N -14.868 36.564 -1.000 -3.214 -0.791 -0.169 C03 A1BBE 6 A1BBE C04 C7 C 0 1 N N N N N N -16.849 36.102 -2.643 -1.028 0.441 0.090 C04 A1BBE 7 A1BBE C05 C8 C 0 1 N N N N N N -18.008 35.103 -4.525 1.140 0.462 1.200 C05 A1BBE 8 A1BBE C12 C9 C 0 1 N N N N N N -16.253 34.028 -3.390 0.220 -1.543 0.169 C12 A1BBE 9 A1BBE C6 C10 C 0 1 Y N N N N N -15.529 37.736 -7.993 5.925 0.283 -0.257 C6 A1BBE 10 A1BBE C8 C11 C 0 1 Y N N N N N -16.595 34.606 -6.671 3.168 -0.989 1.725 C8 A1BBE 11 A1BBE C9 C12 C 0 1 Y N N N N N -17.121 35.490 -5.727 2.578 0.031 1.073 C9 A1BBE 12 A1BBE N01 N1 N 0 1 N N N N N N -17.340 34.813 -3.263 0.368 -0.068 0.068 N01 A1BBE 13 A1BBE N1 N2 N 0 1 Y N N N N N -15.810 38.931 -7.508 5.851 1.311 -1.097 N1 A1BBE 14 A1BBE N3 N3 N 0 1 Y N N N N N -16.993 38.032 -5.713 3.615 1.661 -0.639 N3 A1BBE 15 A1BBE N6 N4 N 0 1 N N N N N N -14.765 37.593 -9.221 7.116 -0.402 -0.081 N6 A1BBE 16 A1BBE N7 N5 N 0 1 Y N N N N N -15.949 35.292 -7.602 4.478 -1.079 1.356 N7 A1BBE 17 A1BBE O01 O1 O 0 1 N N N N N N -15.226 33.274 -1.222 -0.580 -2.246 -2.027 O01 A1BBE 18 A1BBE O02 O2 O 0 1 N N N N N N -15.648 37.605 -0.440 -3.997 0.394 -0.332 O02 A1BBE 19 A1BBE O03 O3 O 0 1 N N N N N N -13.638 39.027 0.196 -6.043 2.021 -0.049 O03 A1BBE 20 A1BBE O04 O4 O 0 1 N N N N N N -15.945 39.992 0.397 -6.447 -0.508 -0.644 O04 A1BBE 21 A1BBE O05 O5 O 0 1 N N N N N N -14.928 39.585 -1.865 -5.581 0.187 1.623 O05 A1BBE 22 A1BBE P01 P1 P 0 1 N N N N N N -15.018 39.133 -0.423 -5.519 0.516 0.181 P01 A1BBE 23 A1BBE H1 H1 H 0 1 N N N N N N -16.694 40.069 -6.001 4.709 2.805 -1.964 H1 A1BBE 24 A1BBE H2 H2 H 0 1 N N N N N N -14.285 34.693 -2.472 -1.591 -2.673 -0.265 H2 A1BBE 25 A1BBE H3 H3 H 0 1 N N N N N N -16.506 35.133 -0.655 -1.905 -0.213 -1.794 H3 A1BBE 26 A1BBE H4 H4 H 0 1 N N N N N N -14.191 36.149 -0.239 -3.701 -1.621 -0.682 H4 A1BBE 27 A1BBE H5 H5 H 0 1 N N N N N N -14.278 36.947 -1.846 -3.122 -1.022 0.891 H5 A1BBE 28 A1BBE H6 H6 H 0 1 N N N N N N -16.291 36.724 -3.359 -1.076 1.436 -0.352 H6 A1BBE 29 A1BBE H7 H7 H 0 1 N N N N N N -17.667 36.692 -2.204 -1.411 0.459 1.110 H7 A1BBE 30 A1BBE H8 H8 H 0 1 N N N N N N -18.703 35.937 -4.346 0.726 0.079 2.133 H8 A1BBE 31 A1BBE H9 H9 H 0 1 N N N N N N -18.577 34.206 -4.811 1.085 1.551 1.198 H9 A1BBE 32 A1BBE H10 H10 H 0 1 N N N N N N -16.533 32.965 -3.345 0.033 -1.837 1.202 H10 A1BBE 33 A1BBE H11 H11 H 0 1 N N N N N N -15.735 34.231 -4.339 1.111 -2.042 -0.213 H11 A1BBE 34 A1BBE H12 H12 H 0 1 N N N N N N -16.699 33.531 -6.646 2.677 -1.639 2.434 H12 A1BBE 35 A1BBE H14 H14 H 0 1 N N N N N N -14.528 38.498 -9.574 7.908 -0.134 -0.573 H14 A1BBE 36 A1BBE H15 H15 H 0 1 N N N N N N -13.928 37.078 -9.035 7.159 -1.151 0.535 H15 A1BBE 37 A1BBE H16 H16 H 0 1 N N N N N N -15.464 34.893 -8.380 5.108 -1.736 1.691 H16 A1BBE 38 A1BBE H17 H17 H 0 1 N N N N N N -14.684 33.465 -0.465 -0.059 -3.060 -2.056 H17 A1BBE 39 A1BBE H18 H18 H 0 1 N N N N N N -12.982 39.267 -0.448 -6.955 2.168 0.238 H18 A1BBE 40 A1BBE H19 H19 H 0 1 N N N N N N -16.312 40.675 -0.151 -6.455 -0.351 -1.598 H19 A1BBE 41 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BBE N6 C6 SING N N 1 A1BBE C6 N1 DOUB Y N 2 A1BBE C6 C5 SING Y N 3 A1BBE N7 C5 SING Y N 4 A1BBE N7 C8 SING Y N 5 A1BBE N1 C2 SING Y N 6 A1BBE C5 C4 DOUB Y N 7 A1BBE C8 C9 DOUB Y N 8 A1BBE C2 N3 DOUB Y N 9 A1BBE C4 C9 SING Y N 10 A1BBE C4 N3 SING Y N 11 A1BBE C9 C05 SING N N 12 A1BBE C05 N01 SING N N 13 A1BBE C12 N01 SING N N 14 A1BBE C12 C01 SING N N 15 A1BBE N01 C04 SING N N 16 A1BBE C04 C02 SING N N 17 A1BBE C01 C02 SING N N 18 A1BBE C01 O01 SING N N 19 A1BBE O05 P01 DOUB N N 20 A1BBE C02 C03 SING N N 21 A1BBE C03 O02 SING N N 22 A1BBE O02 P01 SING N N 23 A1BBE P01 O03 SING N N 24 A1BBE P01 O04 SING N N 25 A1BBE C2 H1 SING N N 26 A1BBE C01 H2 SING N N 27 A1BBE C02 H3 SING N N 28 A1BBE C03 H4 SING N N 29 A1BBE C03 H5 SING N N 30 A1BBE C04 H6 SING N N 31 A1BBE C04 H7 SING N N 32 A1BBE C05 H8 SING N N 33 A1BBE C05 H9 SING N N 34 A1BBE C12 H10 SING N N 35 A1BBE C12 H11 SING N N 36 A1BBE C8 H12 SING N N 37 A1BBE N6 H14 SING N N 38 A1BBE N6 H15 SING N N 39 A1BBE N7 H16 SING N N 40 A1BBE O01 H17 SING N N 41 A1BBE O03 H18 SING N N 42 A1BBE O04 H19 SING N N 43 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BBE SMILES ACDLabs 14.52 "O=P(O)(O)OCC1CN(Cc2c[NH]c3c2ncnc3N)CC1O" A1BBE InChI InChI 1.06 "InChI=1S/C12H18N5O5P/c13-12-11-10(15-6-16-12)7(1-14-11)2-17-3-8(9(18)4-17)5-22-23(19,20)21/h1,6,8-9,14,18H,2-5H2,(H2,13,15,16)(H2,19,20,21)/t8-,9+/m1/s1" A1BBE InChIKey InChI 1.06 QPUSNADQSHKIFF-BDAKNGLRSA-N A1BBE SMILES_CANONICAL CACTVS 3.385 "Nc1ncnc2c(CN3C[C@H](O)[C@@H](CO[P](O)(O)=O)C3)c[nH]c12" A1BBE SMILES CACTVS 3.385 "Nc1ncnc2c(CN3C[CH](O)[CH](CO[P](O)(O)=O)C3)c[nH]c12" A1BBE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c(c2c([nH]1)c(ncn2)N)CN3C[C@@H]([C@H](C3)O)COP(=O)(O)O" A1BBE SMILES "OpenEye OEToolkits" 2.0.7 "c1c(c2c([nH]1)c(ncn2)N)CN3CC(C(C3)O)COP(=O)(O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BBE "SYSTEMATIC NAME" ACDLabs 14.52 "{(3R,4R)-1-[(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-4-hydroxypyrrolidin-3-yl}methyl dihydrogen phosphate" A1BBE "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(3~{R},4~{R})-1-[(4-azanyl-5~{H}-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-4-oxidanyl-pyrrolidin-3-yl]methyl dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BBE "Create component" 2024-09-29 RCSB A1BBE "Initial release" 2025-02-05 RCSB #