data_A1BBI # _chem_comp.id A1BBI _chem_comp.name "(3R)-3-{[(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]methyl}oxan-3-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H16 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-30 _chem_comp.pdbx_modified_date 2025-06-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 248.281 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BBI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HFH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BBI N2 N1 N 0 1 Y N N N N N 15.022 0.133 3.786 -1.659 -1.765 0.163 N2 A1BBI 1 A1BBI C3 C1 C 0 1 Y N N N N N 15.190 1.361 3.197 -1.391 -0.474 -0.007 C3 A1BBI 2 A1BBI C6 C2 C 0 1 Y N N N N N 15.343 2.524 3.985 -2.464 0.430 -0.040 C6 A1BBI 3 A1BBI C9 C3 C 0 1 N N N N N N 12.497 0.809 1.185 3.503 -1.250 -0.243 C9 A1BBI 4 A1BBI C12 C4 C 0 1 N N N N N N 13.336 -0.627 -0.695 2.515 0.770 0.839 C12 A1BBI 5 A1BBI C1 C5 C 0 1 N N R N N N 13.635 0.621 0.180 2.344 -0.249 -0.290 C1 A1BBI 6 A1BBI C10 C6 C 0 1 N N N N N N 12.214 -0.454 1.924 4.827 -0.487 -0.345 C10 A1BBI 7 A1BBI C11 C7 C 0 1 N N N N N N 11.915 -1.603 0.999 4.902 0.541 0.786 C11 A1BBI 8 A1BBI C2 C8 C 0 1 N N N N N N 14.966 0.391 0.934 1.019 -0.992 -0.112 C2 A1BBI 9 A1BBI C4 C9 C 0 1 Y N N N N N 15.003 0.114 5.146 -2.902 -2.191 0.299 C4 A1BBI 10 A1BBI C5 C10 C 0 1 Y N N N N N 15.301 2.323 5.377 -3.771 -0.069 0.109 C5 A1BBI 11 A1BBI C7 C11 C 0 1 Y N N N N N 15.546 3.927 3.800 -2.595 1.876 -0.201 C7 A1BBI 12 A1BBI C8 C12 C 0 1 Y N N N N N 15.604 4.516 5.052 -3.908 2.156 -0.144 C8 A1BBI 13 A1BBI N1 N2 N 0 1 N N N N N N 15.227 1.459 1.850 -0.088 -0.033 -0.149 N1 A1BBI 14 A1BBI N3 N3 N 0 1 Y N N N N N 15.129 1.131 5.997 -3.937 -1.380 0.275 N3 A1BBI 15 A1BBI N4 N4 N 0 1 Y N N N N N 15.461 3.531 6.022 -4.621 1.000 0.042 N4 A1BBI 16 A1BBI O1 O1 O 0 1 N N N N N N 13.780 1.746 -0.621 2.348 0.427 -1.549 O1 A1BBI 17 A1BBI O2 O2 O 0 1 N N N N N N 12.892 -1.763 0.005 3.780 1.422 0.703 O2 A1BBI 18 A1BBI H9 H1 H 0 1 N N N N N N 12.781 1.590 1.906 3.470 -1.802 0.696 H9 A1BBI 19 A1BBI H10 H2 H 0 1 N N N N N N 11.590 1.120 0.646 3.418 -1.947 -1.078 H10 A1BBI 20 A1BBI H15 H3 H 0 1 N N N N N N 14.260 -0.897 -1.228 1.717 1.511 0.785 H15 A1BBI 21 A1BBI H16 H4 H 0 1 N N N N N N 12.559 -0.352 -1.423 2.472 0.259 1.801 H16 A1BBI 22 A1BBI H12 H5 H 0 1 N N N N N N 11.346 -0.293 2.580 5.658 -1.187 -0.257 H12 A1BBI 23 A1BBI H11 H6 H 0 1 N N N N N N 13.092 -0.711 2.535 4.880 0.023 -1.307 H11 A1BBI 24 A1BBI H14 H7 H 0 1 N N N N N N 10.945 -1.421 0.514 4.890 0.027 1.747 H14 A1BBI 25 A1BBI H13 H8 H 0 1 N N N N N N 11.861 -2.528 1.592 5.823 1.117 0.694 H13 A1BBI 26 A1BBI H3 H9 H 0 1 N N N N N N 14.905 -0.555 1.492 0.898 -1.718 -0.916 H3 A1BBI 27 A1BBI H2 H10 H 0 1 N N N N N N 15.787 0.334 0.205 1.019 -1.510 0.848 H2 A1BBI 28 A1BBI H5 H11 H 0 1 N N N N N N 14.867 -0.858 5.597 -3.075 -3.248 0.436 H5 A1BBI 29 A1BBI H6 H12 H 0 1 N N N N N N 15.638 4.437 2.852 -1.791 2.584 -0.340 H6 A1BBI 30 A1BBI H7 H13 H 0 1 N N N N N N 15.739 5.570 5.244 -4.336 3.144 -0.230 H7 A1BBI 31 A1BBI H4 H14 H 0 1 N N N N N N 16.151 1.775 1.633 0.094 0.912 -0.273 H4 A1BBI 32 A1BBI H8 H15 H 0 1 N N N N N N 15.472 3.673 7.012 -5.587 0.949 0.114 H8 A1BBI 33 A1BBI H1 H16 H 0 1 N N N N N N 13.962 2.502 -0.076 1.643 1.081 -1.646 H1 A1BBI 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BBI C12 O2 SING N N 1 A1BBI C12 C1 SING N N 2 A1BBI O1 C1 SING N N 3 A1BBI O2 C11 SING N N 4 A1BBI C1 C2 SING N N 5 A1BBI C1 C9 SING N N 6 A1BBI C2 N1 SING N N 7 A1BBI C11 C10 SING N N 8 A1BBI C9 C10 SING N N 9 A1BBI N1 C3 SING N N 10 A1BBI C3 N2 DOUB Y N 11 A1BBI C3 C6 SING Y N 12 A1BBI N2 C4 SING Y N 13 A1BBI C7 C6 SING Y N 14 A1BBI C7 C8 DOUB Y N 15 A1BBI C6 C5 DOUB Y N 16 A1BBI C8 N4 SING Y N 17 A1BBI C4 N3 DOUB Y N 18 A1BBI C5 N3 SING Y N 19 A1BBI C5 N4 SING Y N 20 A1BBI C9 H9 SING N N 21 A1BBI C9 H10 SING N N 22 A1BBI C12 H15 SING N N 23 A1BBI C12 H16 SING N N 24 A1BBI C10 H12 SING N N 25 A1BBI C10 H11 SING N N 26 A1BBI C11 H14 SING N N 27 A1BBI C11 H13 SING N N 28 A1BBI C2 H3 SING N N 29 A1BBI C2 H2 SING N N 30 A1BBI C4 H5 SING N N 31 A1BBI C7 H6 SING N N 32 A1BBI C8 H7 SING N N 33 A1BBI N1 H4 SING N N 34 A1BBI N4 H8 SING N N 35 A1BBI O1 H1 SING N N 36 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BBI SMILES ACDLabs 14.52 "OC1(CNc2ncnc3[NH]ccc32)CCCOC1" A1BBI InChI InChI 1.06 "InChI=1S/C12H16N4O2/c17-12(3-1-5-18-7-12)6-14-11-9-2-4-13-10(9)15-8-16-11/h2,4,8,17H,1,3,5-7H2,(H2,13,14,15,16)/t12-/m1/s1" A1BBI InChIKey InChI 1.06 ZZAXDKBDCWMESR-GFCCVEGCSA-N A1BBI SMILES_CANONICAL CACTVS 3.385 "O[C@]1(CCCOC1)CNc2ncnc3[nH]ccc23" A1BBI SMILES CACTVS 3.385 "O[C]1(CCCOC1)CNc2ncnc3[nH]ccc23" A1BBI SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)NC[C@@]3(CCCOC3)O" A1BBI SMILES "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)NCC3(CCCOC3)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BBI "SYSTEMATIC NAME" ACDLabs 14.52 "(3R)-3-{[(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]methyl}oxan-3-ol" A1BBI "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{R})-3-[(7~{H}-pyrrolo[2,3-d]pyrimidin-4-ylamino)methyl]oxan-3-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BBI "Create component" 2024-09-30 RCSB A1BBI "Initial release" 2025-06-11 RCSB #