data_A1BBO # _chem_comp.id A1BBO _chem_comp.name "(3R)-3-{[(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]methyl}thian-3-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H16 N4 O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-30 _chem_comp.pdbx_modified_date 2025-06-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 264.347 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BBO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HFN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BBO N2 N1 N 0 1 Y N N N N N 15.079 -0.088 3.958 -2.020 -1.775 0.247 N2 A1BBO 1 A1BBO C3 C1 C 0 1 Y N N N N N 15.204 1.033 3.172 -1.693 -0.506 0.020 C3 A1BBO 2 A1BBO C6 C2 C 0 1 Y N N N N N 15.379 2.293 3.810 -2.724 0.442 -0.062 C6 A1BBO 3 A1BBO C9 C3 C 0 1 N N N N N N 13.954 -2.549 0.243 3.154 -1.510 -0.146 C9 A1BBO 4 A1BBO C12 C4 C 0 1 N N N N N N 12.689 -0.412 0.590 2.251 0.607 0.838 C12 A1BBO 5 A1BBO C1 C5 C 0 1 N N R N N N 13.830 -1.282 1.147 2.050 -0.461 -0.240 C1 A1BBO 6 A1BBO C10 C6 C 0 1 N N N N N N 12.719 -3.483 0.322 4.490 -0.930 -0.601 C10 A1BBO 7 A1BBO C11 C7 C 0 1 N N N N N N 11.416 -2.792 -0.162 5.001 0.079 0.431 C11 A1BBO 8 A1BBO C2 C8 C 0 1 N N N N N N 15.184 -0.456 1.109 0.691 -1.135 -0.039 C2 A1BBO 9 A1BBO C4 C9 C 0 1 Y N N N N N 15.091 0.036 5.317 -3.282 -2.138 0.391 C4 A1BBO 10 A1BBO C5 C10 C 0 1 Y N N N N N 15.388 2.253 5.232 -4.054 0.010 0.097 C5 A1BBO 11 A1BBO C7 C11 C 0 1 Y N N N N N 15.566 3.686 3.488 -2.789 1.885 -0.290 C7 A1BBO 12 A1BBO C8 C12 C 0 1 Y N N N N N 15.665 4.411 4.680 -4.088 2.225 -0.257 C8 A1BBO 13 A1BBO N1 N2 N 0 1 N N N N N N 15.164 0.854 1.787 -0.371 -0.130 -0.129 N1 A1BBO 14 A1BBO N3 N3 N 0 1 Y N N N N N 15.241 1.158 6.033 -4.280 -1.284 0.321 N3 A1BBO 15 A1BBO N4 N4 N 0 1 Y N N N N N 15.561 3.528 5.750 -4.854 1.112 -0.025 N4 A1BBO 16 A1BBO O1 O1 O 0 1 N N N N N N 13.542 -1.671 2.490 2.088 0.153 -1.529 O1 A1BBO 17 A1BBO S1 S1 S 0 1 N N N N N N 11.061 -1.221 0.730 3.825 1.462 0.531 S1 A1BBO 18 A1BBO H9 H1 H 0 1 N N N N N N 14.842 -3.117 0.558 3.243 -1.846 0.887 H9 A1BBO 19 A1BBO H10 H2 H 0 1 N N N N N N 14.079 -2.223 -0.800 2.898 -2.359 -0.778 H10 A1BBO 20 A1BBO H16 H3 H 0 1 N N N N N N 12.890 -0.205 -0.471 1.432 1.325 0.798 H16 A1BBO 21 A1BBO H15 H4 H 0 1 N N N N N N 12.662 0.535 1.150 2.277 0.135 1.820 H15 A1BBO 22 A1BBO H11 H5 H 0 1 N N N N N N 12.583 -3.799 1.367 5.216 -1.735 -0.709 H11 A1BBO 23 A1BBO H12 H6 H 0 1 N N N N N N 12.904 -4.366 -0.307 4.359 -0.429 -1.560 H12 A1BBO 24 A1BBO H14 H7 H 0 1 N N N N N N 11.514 -2.571 -1.235 5.081 -0.403 1.405 H14 A1BBO 25 A1BBO H13 H8 H 0 1 N N N N N N 10.574 -3.482 -0.005 5.978 0.452 0.125 H13 A1BBO 26 A1BBO H3 H9 H 0 1 N N N N N N 15.965 -1.068 1.584 0.543 -1.890 -0.811 H3 A1BBO 27 A1BBO H2 H10 H 0 1 N N N N N N 15.444 -0.284 0.054 0.661 -1.609 0.942 H2 A1BBO 28 A1BBO H5 H11 H 0 1 N N N N N N 14.965 -0.877 5.881 -3.503 -3.179 0.574 H5 A1BBO 29 A1BBO H6 H12 H 0 1 N N N N N N 15.621 4.101 2.492 -1.953 2.549 -0.453 H6 A1BBO 30 A1BBO H7 H13 H 0 1 N N N N N N 15.800 5.480 4.757 -4.471 3.226 -0.391 H7 A1BBO 31 A1BBO H4 H14 H 0 1 N N N N N N 15.953 1.353 1.429 -0.146 0.799 -0.294 H4 A1BBO 32 A1BBO H8 H15 H 0 1 N N N N N N 15.603 3.769 6.719 -5.822 1.107 0.041 H8 A1BBO 33 A1BBO H1 H16 H 0 1 N N N N N N 13.468 -0.897 3.035 1.412 0.832 -1.661 H1 A1BBO 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BBO C11 C10 SING N N 1 A1BBO C11 S1 SING N N 2 A1BBO C9 C10 SING N N 3 A1BBO C9 C1 SING N N 4 A1BBO C12 S1 SING N N 5 A1BBO C12 C1 SING N N 6 A1BBO C2 C1 SING N N 7 A1BBO C2 N1 SING N N 8 A1BBO C1 O1 SING N N 9 A1BBO N1 C3 SING N N 10 A1BBO C3 C6 DOUB Y N 11 A1BBO C3 N2 SING Y N 12 A1BBO C7 C6 SING Y N 13 A1BBO C7 C8 DOUB Y N 14 A1BBO C6 C5 SING Y N 15 A1BBO N2 C4 DOUB Y N 16 A1BBO C8 N4 SING Y N 17 A1BBO C5 N4 SING Y N 18 A1BBO C5 N3 DOUB Y N 19 A1BBO C4 N3 SING Y N 20 A1BBO C9 H9 SING N N 21 A1BBO C9 H10 SING N N 22 A1BBO C12 H16 SING N N 23 A1BBO C12 H15 SING N N 24 A1BBO C10 H11 SING N N 25 A1BBO C10 H12 SING N N 26 A1BBO C11 H14 SING N N 27 A1BBO C11 H13 SING N N 28 A1BBO C2 H3 SING N N 29 A1BBO C2 H2 SING N N 30 A1BBO C4 H5 SING N N 31 A1BBO C7 H6 SING N N 32 A1BBO C8 H7 SING N N 33 A1BBO N1 H4 SING N N 34 A1BBO N4 H8 SING N N 35 A1BBO O1 H1 SING N N 36 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BBO SMILES ACDLabs 14.52 "OC1(CNc2ncnc3[NH]ccc32)CCCSC1" A1BBO InChI InChI 1.06 "InChI=1S/C12H16N4OS/c17-12(3-1-5-18-7-12)6-14-11-9-2-4-13-10(9)15-8-16-11/h2,4,8,17H,1,3,5-7H2,(H2,13,14,15,16)/t12-/m1/s1" A1BBO InChIKey InChI 1.06 NIDUTKUPORUTSY-GFCCVEGCSA-N A1BBO SMILES_CANONICAL CACTVS 3.385 "O[C@]1(CCCSC1)CNc2ncnc3[nH]ccc23" A1BBO SMILES CACTVS 3.385 "O[C]1(CCCSC1)CNc2ncnc3[nH]ccc23" A1BBO SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)NC[C@@]3(CCCSC3)O" A1BBO SMILES "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)NCC3(CCCSC3)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BBO "SYSTEMATIC NAME" ACDLabs 14.52 "(3R)-3-{[(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]methyl}thian-3-ol" A1BBO "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{R})-3-[(7~{H}-pyrrolo[2,3-d]pyrimidin-4-ylamino)methyl]thian-3-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BBO "Create component" 2024-09-30 RCSB A1BBO "Initial release" 2025-06-11 RCSB #