data_A1BBS # _chem_comp.id A1BBS _chem_comp.name "(3aS,6S,6aR)-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)octahydrocyclopenta[b]pyrrol-6-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H16 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-10-01 _chem_comp.pdbx_modified_date 2025-06-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 244.292 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BBS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HFR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BBS N2 N1 N 0 1 Y N N N N N 14.574 0.019 4.191 -0.031 1.172 0.895 N2 A1BBS 1 A1BBS C3 C1 C 0 1 N N N N N N 12.710 0.391 -0.714 3.247 0.833 -0.531 C3 A1BBS 2 A1BBS C6 C2 C 0 1 N N N N N N 14.731 2.334 1.178 1.804 -0.669 1.650 C6 A1BBS 3 A1BBS C9 C3 C 0 1 Y N N N N N 15.094 2.199 5.665 -2.544 0.422 0.209 C9 A1BBS 4 A1BBS C12 C4 C 0 1 Y N N N N N 15.398 4.383 5.283 -3.405 -1.551 -0.424 C12 A1BBS 5 A1BBS C1 C5 C 0 1 N N S N N N 12.662 -0.519 1.636 1.102 0.254 -1.535 C1 A1BBS 6 A1BBS C10 C6 C 0 1 Y N N N N N 14.959 2.381 4.263 -1.501 -0.522 0.203 C10 A1BBS 7 A1BBS C11 C7 C 0 1 Y N N N N N 15.165 3.796 4.059 -2.100 -1.789 -0.213 C11 A1BBS 8 A1BBS C13 C8 C 0 1 N N R N N N 14.040 0.095 1.384 1.564 -0.974 -0.715 C13 A1BBS 9 A1BBS C2 C9 C 0 1 N N N N N N 12.127 -0.706 0.170 1.864 1.426 -0.871 C2 A1BBS 10 A1BBS C4 C10 C 0 1 N N S N N N 14.108 0.464 -0.167 3.057 -0.687 -0.405 C4 A1BBS 11 A1BBS C5 C11 C 0 1 N N N N N N 14.832 1.779 -0.272 3.187 -1.082 1.089 C5 A1BBS 12 A1BBS C7 C12 C 0 1 Y N N N N N 14.680 1.195 3.534 -0.211 -0.103 0.563 C7 A1BBS 13 A1BBS C8 C13 C 0 1 Y N N N N N 14.732 -0.007 5.543 -1.039 2.026 0.887 C8 A1BBS 14 A1BBS N1 N2 N 0 1 N N N N N N 14.532 1.217 2.168 0.848 -0.994 0.571 N1 A1BBS 15 A1BBS N3 N3 N 0 1 Y N N N N N 14.982 1.020 6.329 -2.264 1.678 0.557 N3 A1BBS 16 A1BBS N4 N4 N 0 1 Y N N N N N 15.345 3.400 6.275 -3.682 -0.231 -0.174 N4 A1BBS 17 A1BBS O1 O1 O 0 1 N N N N N N 11.886 0.341 2.442 -0.310 0.438 -1.415 O1 A1BBS 18 A1BBS H8 H1 H 0 1 N N N N N N 12.174 1.343 -0.588 3.954 1.055 -1.330 H8 A1BBS 19 A1BBS H7 H2 H 0 1 N N N N N N 12.703 0.104 -1.776 3.608 1.243 0.412 H7 A1BBS 20 A1BBS H11 H3 H 0 1 N N N N N N 15.659 2.872 1.423 1.572 -1.243 2.548 H11 A1BBS 21 A1BBS H12 H4 H 0 1 N N N N N N 13.879 3.026 1.240 1.783 0.398 1.868 H12 A1BBS 22 A1BBS H15 H5 H 0 1 N N N N N N 15.590 5.433 5.449 -4.127 -2.288 -0.742 H15 A1BBS 23 A1BBS H1 H6 H 0 1 N N N N N N 12.779 -1.508 2.104 1.388 0.148 -2.581 H1 A1BBS 24 A1BBS H14 H7 H 0 1 N N N N N N 15.140 4.307 3.108 -1.591 -2.734 -0.328 H14 A1BBS 25 A1BBS H3 H8 H 0 1 N N N N N N 14.762 -0.724 1.517 1.425 -1.903 -1.268 H3 A1BBS 26 A1BBS H6 H9 H 0 1 N N N N N N 11.029 -0.638 0.166 1.354 1.748 0.037 H6 A1BBS 27 A1BBS H5 H10 H 0 1 N N N N N N 12.435 -1.690 -0.212 1.967 2.258 -1.567 H5 A1BBS 28 A1BBS H2 H11 H 0 1 N N N N N N 14.716 -0.308 -0.661 3.733 -1.245 -1.052 H2 A1BBS 29 A1BBS H10 H12 H 0 1 N N N N N N 15.881 1.633 -0.570 3.986 -0.520 1.572 H10 A1BBS 30 A1BBS H9 H13 H 0 1 N N N N N N 14.337 2.449 -0.990 3.347 -2.154 1.196 H9 A1BBS 31 A1BBS H13 H14 H 0 1 N N N N N N 14.643 -0.971 6.021 -0.850 3.053 1.164 H13 A1BBS 32 A1BBS H16 H15 H 0 1 N N N N N N 15.468 3.547 7.256 -4.558 0.178 -0.258 H16 A1BBS 33 A1BBS H4 H16 H 0 1 N N N N N N 12.274 0.400 3.307 -0.637 1.252 -1.821 H4 A1BBS 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BBS C3 C4 SING N N 1 A1BBS C3 C2 SING N N 2 A1BBS C5 C4 SING N N 3 A1BBS C5 C6 SING N N 4 A1BBS C4 C13 SING N N 5 A1BBS C2 C1 SING N N 6 A1BBS C6 N1 SING N N 7 A1BBS C13 C1 SING N N 8 A1BBS C13 N1 SING N N 9 A1BBS C1 O1 SING N N 10 A1BBS N1 C7 SING N N 11 A1BBS C7 N2 DOUB Y N 12 A1BBS C7 C10 SING Y N 13 A1BBS C11 C10 SING Y N 14 A1BBS C11 C12 DOUB Y N 15 A1BBS N2 C8 SING Y N 16 A1BBS C10 C9 DOUB Y N 17 A1BBS C12 N4 SING Y N 18 A1BBS C8 N3 DOUB Y N 19 A1BBS C9 N4 SING Y N 20 A1BBS C9 N3 SING Y N 21 A1BBS C3 H8 SING N N 22 A1BBS C3 H7 SING N N 23 A1BBS C6 H11 SING N N 24 A1BBS C6 H12 SING N N 25 A1BBS C12 H15 SING N N 26 A1BBS C1 H1 SING N N 27 A1BBS C11 H14 SING N N 28 A1BBS C13 H3 SING N N 29 A1BBS C2 H6 SING N N 30 A1BBS C2 H5 SING N N 31 A1BBS C4 H2 SING N N 32 A1BBS C5 H10 SING N N 33 A1BBS C5 H9 SING N N 34 A1BBS C8 H13 SING N N 35 A1BBS N4 H16 SING N N 36 A1BBS O1 H4 SING N N 37 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BBS SMILES ACDLabs 14.52 "OC1CCC2CCN(c3ncnc4[NH]ccc34)C12" A1BBS InChI InChI 1.06 "InChI=1S/C13H16N4O/c18-10-2-1-8-4-6-17(11(8)10)13-9-3-5-14-12(9)15-7-16-13/h3,5,7-8,10-11,18H,1-2,4,6H2,(H,14,15,16)/t8-,10-,11+/m0/s1" A1BBS InChIKey InChI 1.06 HFJBSPXTGIAUDA-INTQDDNPSA-N A1BBS SMILES_CANONICAL CACTVS 3.385 "O[C@H]1CC[C@H]2CCN([C@@H]12)c3ncnc4[nH]ccc34" A1BBS SMILES CACTVS 3.385 "O[CH]1CC[CH]2CCN([CH]12)c3ncnc4[nH]ccc34" A1BBS SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)N3CC[C@H]4[C@@H]3[C@H](CC4)O" A1BBS SMILES "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)N3CCC4C3C(CC4)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BBS "SYSTEMATIC NAME" ACDLabs 14.52 "(3aS,6S,6aR)-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)octahydrocyclopenta[b]pyrrol-6-ol" A1BBS "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{a}~{S},6~{S},6~{a}~{R})-1-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)-3,3~{a},4,5,6,6~{a}-hexahydro-2~{H}-cyclopenta[b]pyrrol-6-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BBS "Create component" 2024-10-01 RCSB A1BBS "Initial release" 2025-06-11 RCSB #