data_A1BCM # _chem_comp.id A1BCM _chem_comp.name "5-({3-[(2-methylphenyl)methyl]-1,2,4-oxadiazol-5-yl}methyl)pyridin-2-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H16 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-10-04 _chem_comp.pdbx_modified_date 2024-10-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 280.324 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BCM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HIR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BCM N1 N1 N 0 1 N N N N N N 5.390 25.577 -23.477 -4.570 2.806 -0.488 N1 A1BCM 1 A1BCM N3 N2 N 0 1 Y N N N N N 7.353 30.133 -19.654 0.395 -1.631 0.878 N3 A1BCM 2 A1BCM C4 C1 C 0 1 Y N N N N N 6.316 34.940 -20.619 3.971 1.612 -1.563 C4 A1BCM 3 A1BCM C5 C2 C 0 1 Y N N N N N 6.867 33.741 -20.201 3.721 0.299 -1.213 C5 A1BCM 4 A1BCM C6 C3 C 0 1 Y N N N N N 8.204 33.438 -20.461 3.159 0.006 0.016 C6 A1BCM 5 A1BCM C7 C4 C 0 1 N N N N N N 8.786 32.149 -19.922 2.886 -1.426 0.398 C7 A1BCM 6 A1BCM C8 C5 C 0 1 Y N N N N N 7.825 31.311 -19.142 1.457 -1.771 0.065 C8 A1BCM 7 A1BCM C10 C6 C 0 1 N N N N N N 5.844 28.414 -18.646 -2.070 -2.096 0.649 C10 A1BCM 8 A1BCM C13 C7 C 0 1 Y N N N N N 6.755 26.190 -21.592 -4.008 0.572 -1.181 C13 A1BCM 9 A1BCM C15 C8 C 0 1 Y N N N N N 4.656 27.714 -20.759 -2.729 0.257 1.204 C15 A1BCM 10 A1BCM C14 C9 C 0 1 Y N N N N N 5.552 26.270 -22.333 -3.956 1.586 -0.230 C14 A1BCM 11 A1BCM C12 C10 C 0 1 Y N N N N N 6.855 26.910 -20.417 -3.396 -0.638 -0.909 C12 A1BCM 12 A1BCM N2 N3 N 0 1 Y N N N N N 4.517 27.036 -21.911 -3.326 1.399 0.920 N2 A1BCM 13 A1BCM C11 C11 C 0 1 Y N N N N N 5.795 27.686 -19.971 -2.750 -0.795 0.310 C11 A1BCM 14 A1BCM C9 C12 C 0 1 Y N N N N N 6.582 29.707 -18.714 -0.637 -2.049 0.185 C9 A1BCM 15 A1BCM O O1 O 0 1 Y N N N N N 6.515 30.530 -17.662 -0.175 -2.426 -1.011 O A1BCM 16 A1BCM N N4 N 0 1 Y N N N N N 7.380 31.607 -17.959 1.026 -2.259 -1.059 N A1BCM 17 A1BCM C1 C13 C 0 1 Y N N N N N 8.991 34.356 -21.179 2.848 1.027 0.895 C1 A1BCM 18 A1BCM C C14 C 0 1 N N N N N N 10.425 34.064 -21.542 2.230 0.708 2.232 C A1BCM 19 A1BCM C3 C15 C 0 1 Y N N N N N 7.086 35.847 -21.308 3.665 2.633 -0.682 C3 A1BCM 20 A1BCM C2 C16 C 0 1 Y N N N N N 8.410 35.558 -21.586 3.098 2.341 0.544 C2 A1BCM 21 A1BCM H13 H1 H 0 1 N N N N N N 4.478 25.753 -23.848 -5.033 2.947 -1.329 H13 A1BCM 22 A1BCM H14 H2 H 0 1 N N N N N N 6.081 25.864 -24.141 -4.540 3.514 0.174 H14 A1BCM 23 A1BCM H5 H3 H 0 1 N N N N N N 5.281 35.163 -20.404 4.410 1.841 -2.523 H5 A1BCM 24 A1BCM H6 H4 H 0 1 N N N N N N 6.254 33.031 -19.666 3.964 -0.498 -1.899 H6 A1BCM 25 A1BCM H8 H5 H 0 1 N N N N N N 9.148 31.554 -20.773 3.557 -2.083 -0.155 H8 A1BCM 26 A1BCM H7 H6 H 0 1 N N N N N N 9.632 32.402 -19.266 3.052 -1.555 1.468 H7 A1BCM 27 A1BCM H10 H7 H 0 1 N N N N N N 6.341 27.766 -17.909 -2.098 -2.250 1.728 H10 A1BCM 28 A1BCM H9 H8 H 0 1 N N N N N N 4.813 28.616 -18.320 -2.586 -2.917 0.152 H9 A1BCM 29 A1BCM H12 H9 H 0 1 N N N N N N 7.577 25.580 -21.937 -4.523 0.727 -2.118 H12 A1BCM 30 A1BCM H15 H10 H 0 1 N N N N N N 3.826 28.320 -20.426 -2.224 0.140 2.152 H15 A1BCM 31 A1BCM H11 H11 H 0 1 N N N N N N 7.767 26.868 -19.840 -3.420 -1.443 -1.629 H11 A1BCM 32 A1BCM H2 H12 H 0 1 N N N N N N 11.088 34.433 -20.745 1.144 0.699 2.137 H2 A1BCM 33 A1BCM H1 H13 H 0 1 N N N N N N 10.560 32.979 -21.658 2.574 -0.270 2.567 H1 A1BCM 34 A1BCM H H14 H 0 1 N N N N N N 10.674 34.568 -22.488 2.525 1.465 2.958 H A1BCM 35 A1BCM H4 H15 H 0 1 N N N N N N 6.658 36.784 -21.632 3.860 3.659 -0.956 H4 A1BCM 36 A1BCM H3 H16 H 0 1 N N N N N N 9.006 36.277 -22.129 2.855 3.138 1.231 H3 A1BCM 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BCM C C1 SING N N 1 A1BCM C1 C2 SING Y N 2 A1BCM C2 C3 DOUB Y N 3 A1BCM C3 C4 SING Y N 4 A1BCM C4 C5 DOUB Y N 5 A1BCM C5 C6 SING Y N 6 A1BCM C1 C6 DOUB Y N 7 A1BCM C6 C7 SING N N 8 A1BCM C7 C8 SING N N 9 A1BCM C8 N DOUB Y N 10 A1BCM N O SING Y N 11 A1BCM O C9 SING Y N 12 A1BCM C9 C10 SING N N 13 A1BCM C10 C11 SING N N 14 A1BCM C11 C12 SING Y N 15 A1BCM C12 C13 DOUB Y N 16 A1BCM C13 C14 SING Y N 17 A1BCM C14 N1 SING N N 18 A1BCM N2 C14 DOUB Y N 19 A1BCM C15 N2 SING Y N 20 A1BCM C11 C15 DOUB Y N 21 A1BCM N3 C9 DOUB Y N 22 A1BCM C8 N3 SING Y N 23 A1BCM N1 H13 SING N N 24 A1BCM N1 H14 SING N N 25 A1BCM C4 H5 SING N N 26 A1BCM C5 H6 SING N N 27 A1BCM C7 H8 SING N N 28 A1BCM C7 H7 SING N N 29 A1BCM C10 H10 SING N N 30 A1BCM C10 H9 SING N N 31 A1BCM C13 H12 SING N N 32 A1BCM C15 H15 SING N N 33 A1BCM C12 H11 SING N N 34 A1BCM C H2 SING N N 35 A1BCM C H1 SING N N 36 A1BCM C H SING N N 37 A1BCM C3 H4 SING N N 38 A1BCM C2 H3 SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BCM SMILES ACDLabs 14.52 "Nc1ccc(cn1)Cc1nc(Cc2ccccc2C)no1" A1BCM InChI InChI 1.06 "InChI=1S/C16H16N4O/c1-11-4-2-3-5-13(11)9-15-19-16(21-20-15)8-12-6-7-14(17)18-10-12/h2-7,10H,8-9H2,1H3,(H2,17,18)" A1BCM InChIKey InChI 1.06 LGBAWSHDCWXQBT-UHFFFAOYSA-N A1BCM SMILES_CANONICAL CACTVS 3.385 "Cc1ccccc1Cc2noc(Cc3ccc(N)nc3)n2" A1BCM SMILES CACTVS 3.385 "Cc1ccccc1Cc2noc(Cc3ccc(N)nc3)n2" A1BCM SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1ccccc1Cc2nc(on2)Cc3ccc(nc3)N" A1BCM SMILES "OpenEye OEToolkits" 3.1.0.0 "Cc1ccccc1Cc2nc(on2)Cc3ccc(nc3)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BCM "SYSTEMATIC NAME" ACDLabs 14.52 "5-({3-[(2-methylphenyl)methyl]-1,2,4-oxadiazol-5-yl}methyl)pyridin-2-amine" A1BCM "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "5-[[3-[(2-methylphenyl)methyl]-1,2,4-oxadiazol-5-yl]methyl]pyridin-2-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BCM "Create component" 2024-10-04 RCSB A1BCM "Initial release" 2024-10-16 RCSB #