data_A1BDN # _chem_comp.id A1BDN _chem_comp.name "1'H-spiro[cyclopentane-1,2'-quinazolin]-4'(3'H)-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H14 N2 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-10-15 _chem_comp.pdbx_modified_date 2024-10-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 202.252 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BDN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HL7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BDN N1 N1 N 0 1 N N N N N N -13.783 -36.512 -19.629 0.251 1.108 -0.720 N1 A1BDN 1 A1BDN C4 C1 C 0 1 N N N N N N -11.789 -38.629 -21.648 3.789 0.450 -0.078 C4 A1BDN 2 A1BDN C5 C2 C 0 1 N N N N N N -11.821 -37.795 -20.371 2.613 0.518 -1.070 C5 A1BDN 3 A1BDN C6 C3 C 0 1 Y N N N N N -14.543 -35.356 -19.543 -1.050 0.806 -0.329 C6 A1BDN 4 A1BDN C7 C4 C 0 1 Y N N N N N -15.824 -35.368 -18.992 -2.023 1.784 -0.211 C7 A1BDN 5 A1BDN C8 C5 C 0 1 Y N N N N N -16.531 -34.183 -18.868 -3.300 1.433 0.182 C8 A1BDN 6 A1BDN C10 C6 C 0 1 Y N N N N N -14.712 -32.957 -19.842 -2.657 -0.875 0.345 C10 A1BDN 7 A1BDN N N2 N 0 1 N N N N N N -12.068 -35.338 -20.739 0.973 -1.162 -0.333 N A1BDN 8 A1BDN C C7 C 0 1 N N N N N N -12.658 -34.136 -20.616 -0.310 -1.555 -0.196 C A1BDN 9 A1BDN O O1 O 0 1 N N N N N N -12.104 -33.107 -20.988 -0.595 -2.737 -0.204 O A1BDN 10 A1BDN C1 C8 C 0 1 N N N N N N -12.770 -36.625 -20.675 1.338 0.247 -0.254 C1 A1BDN 11 A1BDN C11 C9 C 0 1 Y N N N N N -13.989 -34.137 -19.990 -1.365 -0.536 -0.052 C11 A1BDN 12 A1BDN C2 C10 C 0 1 N N N N N N -13.426 -36.957 -22.022 1.714 0.617 1.197 C2 A1BDN 13 A1BDN C3 C11 C 0 1 N N N N N N -13.104 -38.423 -22.269 3.182 0.131 1.304 C3 A1BDN 14 A1BDN C9 C12 C 0 1 Y N N N N N -15.976 -32.988 -19.282 -3.614 0.112 0.459 C9 A1BDN 15 A1BDN H9 H1 H 0 1 N N N N N N -14.421 -37.272 -19.757 0.433 1.871 -1.291 H9 A1BDN 16 A1BDN H5 H2 H 0 1 N N N N N N -11.635 -39.692 -21.412 4.481 -0.340 -0.373 H5 A1BDN 17 A1BDN H6 H3 H 0 1 N N N N N N -10.987 -38.282 -22.316 4.308 1.408 -0.047 H6 A1BDN 18 A1BDN H7 H4 H 0 1 N N N N N N -12.203 -38.392 -19.530 2.564 1.508 -1.523 H7 A1BDN 19 A1BDN H8 H5 H 0 1 N N N N N N -10.815 -37.422 -20.129 2.731 -0.242 -1.843 H8 A1BDN 20 A1BDN H10 H6 H 0 1 N N N N N N -16.264 -36.298 -18.663 -1.784 2.815 -0.425 H10 A1BDN 21 A1BDN H11 H7 H 0 1 N N N N N N -17.524 -34.194 -18.444 -4.060 2.195 0.274 H11 A1BDN 22 A1BDN H13 H8 H 0 1 N N N N N N -14.286 -32.018 -20.164 -2.907 -1.903 0.561 H13 A1BDN 23 A1BDN H H9 H 0 1 N N N N N N -11.079 -35.356 -20.885 1.665 -1.826 -0.477 H A1BDN 24 A1BDN H1 H10 H 0 1 N N N N N N -14.514 -36.804 -21.970 1.652 1.695 1.349 H1 A1BDN 25 A1BDN H2 H11 H 0 1 N N N N N N -13.006 -36.329 -22.821 1.079 0.089 1.907 H2 A1BDN 26 A1BDN H4 H12 H 0 1 N N N N N N -13.860 -39.070 -21.800 3.215 -0.941 1.497 H4 A1BDN 27 A1BDN H3 H13 H 0 1 N N N N N N -13.060 -38.634 -23.348 3.708 0.677 2.087 H3 A1BDN 28 A1BDN H12 H14 H 0 1 N N N N N N -16.534 -32.070 -19.167 -4.617 -0.147 0.766 H12 A1BDN 29 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BDN C O DOUB N N 1 A1BDN C N SING N N 2 A1BDN N C1 SING N N 3 A1BDN C1 C2 SING N N 4 A1BDN C2 C3 SING N N 5 A1BDN C3 C4 SING N N 6 A1BDN C4 C5 SING N N 7 A1BDN C5 C1 SING N N 8 A1BDN C1 N1 SING N N 9 A1BDN N1 C6 SING N N 10 A1BDN C6 C7 SING Y N 11 A1BDN C7 C8 DOUB Y N 12 A1BDN C8 C9 SING Y N 13 A1BDN C9 C10 DOUB Y N 14 A1BDN C10 C11 SING Y N 15 A1BDN C11 C SING N N 16 A1BDN C6 C11 DOUB Y N 17 A1BDN N1 H9 SING N N 18 A1BDN C4 H5 SING N N 19 A1BDN C4 H6 SING N N 20 A1BDN C5 H7 SING N N 21 A1BDN C5 H8 SING N N 22 A1BDN C7 H10 SING N N 23 A1BDN C8 H11 SING N N 24 A1BDN C10 H13 SING N N 25 A1BDN N H SING N N 26 A1BDN C2 H1 SING N N 27 A1BDN C2 H2 SING N N 28 A1BDN C3 H4 SING N N 29 A1BDN C3 H3 SING N N 30 A1BDN C9 H12 SING N N 31 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BDN SMILES ACDLabs 14.52 "O=C1NC2(CCCC2)Nc2ccccc12" A1BDN InChI InChI 1.06 "InChI=1S/C12H14N2O/c15-11-9-5-1-2-6-10(9)13-12(14-11)7-3-4-8-12/h1-2,5-6,13H,3-4,7-8H2,(H,14,15)" A1BDN InChIKey InChI 1.06 BGYVTOPASJGSEB-UHFFFAOYSA-N A1BDN SMILES_CANONICAL CACTVS 3.385 "O=C1NC2(CCCC2)Nc3ccccc13" A1BDN SMILES CACTVS 3.385 "O=C1NC2(CCCC2)Nc3ccccc13" A1BDN SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1ccc2c(c1)C(=O)NC3(N2)CCCC3" A1BDN SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccc2c(c1)C(=O)NC3(N2)CCCC3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BDN "SYSTEMATIC NAME" ACDLabs 14.52 "1'H-spiro[cyclopentane-1,2'-quinazolin]-4'(3'H)-one" A1BDN "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "spiro[1,3-dihydroquinazoline-2,1'-cyclopentane]-4-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BDN "Create component" 2024-10-15 RCSB A1BDN "Initial release" 2024-10-30 RCSB #