data_A1BG9 # _chem_comp.id A1BG9 _chem_comp.name "4-methyl-2-[(3S)-piperidin-3-yl]-N-(pyridin-2-yl)-1H-imidazole-5-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H19 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-11-11 _chem_comp.pdbx_modified_date 2025-02-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 285.344 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1BG9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HPF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1BG9 N1 N1 N 0 1 Y N N N N N -8.690 5.683 -10.622 -1.890 2.079 0.085 N1 A1BG9 1 A1BG9 N3 N2 N 0 1 Y N N N N N -8.542 4.041 -12.108 -0.990 0.114 0.155 N3 A1BG9 2 A1BG9 C4 C1 C 0 1 N N S N N N -8.498 3.460 -9.563 -3.524 0.185 0.184 C4 A1BG9 3 A1BG9 C5 C2 C 0 1 N N N N N N -9.854 2.959 -9.101 -3.959 -0.197 -1.233 C5 A1BG9 4 A1BG9 C6 C3 C 0 1 N N N N N N -9.771 2.273 -7.737 -5.331 -0.873 -1.174 C6 A1BG9 5 A1BG9 C7 C4 C 0 1 N N N N N N -8.436 1.572 -7.566 -5.252 -2.097 -0.259 C7 A1BG9 6 A1BG9 C8 C5 C 0 1 N N N N N N -7.534 2.296 -9.747 -3.498 -1.070 1.060 C8 A1BG9 7 A1BG9 C10 C6 C 0 1 N N N N N N -8.618 5.361 -14.254 1.471 0.771 0.096 C10 A1BG9 8 A1BG9 C13 C7 C 0 1 Y N N N N N -10.525 3.635 -18.323 5.077 -2.334 -0.143 C13 A1BG9 9 A1BG9 C15 C8 C 0 1 Y N N N N N -8.445 4.736 -18.370 5.438 0.028 -0.139 C15 A1BG9 10 A1BG9 C1 C9 C 0 1 N N N N N N -8.865 7.705 -11.982 0.131 3.603 -0.002 C1 A1BG9 11 A1BG9 C2 C10 C 0 1 Y N N N N N -8.724 6.228 -11.838 -0.571 2.271 0.060 C2 A1BG9 12 A1BG9 C3 C11 C 0 1 Y N N N N N -8.577 4.349 -10.766 -2.148 0.798 0.141 C3 A1BG9 13 A1BG9 N2 N3 N 0 1 N N N N N N -7.841 1.159 -8.849 -4.834 -1.679 1.086 N2 A1BG9 14 A1BG9 C9 C12 C 0 1 Y N N N N N -8.610 5.233 -12.792 0.030 1.045 0.103 C9 A1BG9 15 A1BG9 O1 O1 O 0 1 N N N N N N -8.126 6.348 -14.785 2.265 1.691 0.047 O1 A1BG9 16 A1BG9 N4 N4 N 0 1 N N N N N N -9.269 4.389 -14.941 1.916 -0.501 0.142 N4 A1BG9 17 A1BG9 C11 C13 C 0 1 Y N N N N N -9.399 4.292 -16.335 3.278 -0.767 0.028 C11 A1BG9 18 A1BG9 C12 C14 C 0 1 Y N N N N N -10.481 3.665 -16.950 3.720 -2.084 -0.030 C12 A1BG9 19 A1BG9 C14 C15 C 0 1 Y N N N N N -9.480 4.153 -19.051 5.947 -1.255 -0.196 C14 A1BG9 20 A1BG9 N5 N5 N 0 1 Y N N N N N -8.376 4.802 -17.030 4.140 0.236 -0.035 N5 A1BG9 21 A1BG9 H14 H2 H 0 1 N N N N N N -8.479 3.127 -12.508 -0.890 -0.850 0.193 H14 A1BG9 22 A1BG9 H4 H3 H 0 1 N N N N N N -8.095 4.072 -8.743 -4.231 0.904 0.600 H4 A1BG9 23 A1BG9 H6 H4 H 0 1 N N N N N N -10.543 3.813 -9.029 -4.021 0.700 -1.850 H6 A1BG9 24 A1BG9 H5 H5 H 0 1 N N N N N N -10.238 2.239 -9.839 -3.232 -0.886 -1.664 H5 A1BG9 25 A1BG9 H8 H6 H 0 1 N N N N N N -9.885 3.029 -6.946 -6.066 -0.171 -0.779 H8 A1BG9 26 A1BG9 H7 H7 H 0 1 N N N N N N -10.580 1.532 -7.656 -5.627 -1.186 -2.175 H7 A1BG9 27 A1BG9 H10 H8 H 0 1 N N N N N N -7.741 2.258 -7.061 -6.231 -2.573 -0.202 H10 A1BG9 28 A1BG9 H9 H9 H 0 1 N N N N N N -8.586 0.677 -6.944 -4.527 -2.805 -0.661 H9 A1BG9 29 A1BG9 H13 H10 H 0 1 N N N N N N -6.513 2.647 -9.536 -2.781 -1.783 0.652 H13 A1BG9 30 A1BG9 H12 H11 H 0 1 N N N N N N -7.595 1.949 -10.789 -3.203 -0.799 2.074 H12 A1BG9 31 A1BG9 H17 H12 H 0 1 N N N N N N -11.377 3.206 -18.829 5.450 -3.347 -0.186 H17 A1BG9 32 A1BG9 H19 H13 H 0 1 N N N N N N -7.638 5.168 -18.943 6.111 0.871 -0.188 H19 A1BG9 33 A1BG9 H1 H14 H 0 1 N N N N N N -8.925 8.167 -10.986 0.313 3.966 1.009 H1 A1BG9 34 A1BG9 H3 H15 H 0 1 N N N N N N -7.993 8.106 -12.520 1.082 3.488 -0.524 H3 A1BG9 35 A1BG9 H2 H16 H 0 1 N N N N N N -9.781 7.932 -12.547 -0.493 4.318 -0.538 H2 A1BG9 36 A1BG9 H21 H17 H 0 1 N N N N N N -6.992 0.665 -8.661 -5.509 -1.052 1.496 H21 A1BG9 37 A1BG9 H15 H19 H 0 1 N N N N N N -9.700 3.668 -14.399 1.287 -1.231 0.255 H15 A1BG9 38 A1BG9 H16 H20 H 0 1 N N N N N N -11.266 3.214 -16.362 3.015 -2.901 0.013 H16 A1BG9 39 A1BG9 H18 H21 H 0 1 N N N N N N -9.476 4.102 -20.130 7.012 -1.416 -0.280 H18 A1BG9 40 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1BG9 C1 C2 SING N N 1 A1BG9 C2 N1 SING Y N 2 A1BG9 N1 C3 DOUB Y N 3 A1BG9 C3 C4 SING N N 4 A1BG9 C4 C5 SING N N 5 A1BG9 C5 C6 SING N N 6 A1BG9 C6 C7 SING N N 7 A1BG9 C7 N2 SING N N 8 A1BG9 N2 C8 SING N N 9 A1BG9 C3 N3 SING Y N 10 A1BG9 N3 C9 SING Y N 11 A1BG9 C9 C10 SING N N 12 A1BG9 C10 O1 DOUB N N 13 A1BG9 C10 N4 SING N N 14 A1BG9 N4 C11 SING N N 15 A1BG9 C11 C12 DOUB Y N 16 A1BG9 C12 C13 SING Y N 17 A1BG9 C13 C14 DOUB Y N 18 A1BG9 C14 C15 SING Y N 19 A1BG9 C15 N5 DOUB Y N 20 A1BG9 C2 C9 DOUB Y N 21 A1BG9 C11 N5 SING Y N 22 A1BG9 C4 C8 SING N N 23 A1BG9 N3 H14 SING N N 24 A1BG9 C4 H4 SING N N 25 A1BG9 C5 H6 SING N N 26 A1BG9 C5 H5 SING N N 27 A1BG9 C6 H8 SING N N 28 A1BG9 C6 H7 SING N N 29 A1BG9 C7 H10 SING N N 30 A1BG9 C7 H9 SING N N 31 A1BG9 C8 H13 SING N N 32 A1BG9 C8 H12 SING N N 33 A1BG9 C13 H17 SING N N 34 A1BG9 C15 H19 SING N N 35 A1BG9 C1 H1 SING N N 36 A1BG9 C1 H3 SING N N 37 A1BG9 C1 H2 SING N N 38 A1BG9 N2 H21 SING N N 39 A1BG9 N4 H15 SING N N 40 A1BG9 C12 H16 SING N N 41 A1BG9 C14 H18 SING N N 42 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1BG9 SMILES ACDLabs 14.52 "Cc1nc([NH]c1C(=O)Nc1ccccn1)C1CCCNC1" A1BG9 InChI InChI 1.06 "InChI=1S/C15H19N5O/c1-10-13(15(21)19-12-6-2-3-8-17-12)20-14(18-10)11-5-4-7-16-9-11/h2-3,6,8,11,16H,4-5,7,9H2,1H3,(H,18,20)(H,17,19,21)/t11-/m0/s1" A1BG9 InChIKey InChI 1.06 XCVYJDDLPGWFGF-NSHDSACASA-N A1BG9 SMILES_CANONICAL CACTVS 3.385 "Cc1nc([nH]c1C(=O)Nc2ccccn2)[C@H]3CCCNC3" A1BG9 SMILES CACTVS 3.385 "Cc1nc([nH]c1C(=O)Nc2ccccn2)[CH]3CCCNC3" A1BG9 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1c([nH]c(n1)[C@H]2CCCNC2)C(=O)Nc3ccccn3" A1BG9 SMILES "OpenEye OEToolkits" 3.1.0.0 "Cc1c([nH]c(n1)C2CCCNC2)C(=O)Nc3ccccn3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1BG9 "SYSTEMATIC NAME" ACDLabs 14.52 "4-methyl-2-[(3S)-piperidin-3-yl]-N-(pyridin-2-yl)-1H-imidazole-5-carboxamide" A1BG9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "4-methyl-2-[(3~{S})-piperidin-3-yl]-~{N}-pyridin-2-yl-1~{H}-imidazole-5-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1BG9 "Create component" 2024-11-11 RCSB A1BG9 "Initial release" 2025-02-26 RCSB #